Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 2.0e-141 505.8 257 100.0
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.3e-108 396.7 241 80.1
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 2.1e-106 389.4 254 75.6
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 8.0e-106 387.5 254 74.8
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 6.3e-103 377.9 254 72.0
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 1.4e-102 376.7 241 74.7
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.4e-102 376.7 241 76.3
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.8e-102 376.3 233 76.0
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 1.8e-102 376.3 241 76.8
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 3.1e-102 375.6 241 75.1
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.1e-102 375.2 233 76.0
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 5.4e-102 374.8 233 75.1
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 7.0e-102 374.4 264 73.1
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 5.9e-101 371.3 241 75.5
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.7e-100 369.8 241 75.5
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 6.6e-100 367.9 228 77.2
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 6.6e-100 367.9 229 76.4
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 1.1e-99 367.1 253 72.7
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 1.5e-99 366.7 241 71.4
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.9e-99 366.3 241 71.4
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 3.3e-99 365.5 229 75.5
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 4.3e-99 365.2 240 72.9
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 4.3e-99 365.2 241 71.8
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 5.6e-99 364.8 241 70.5
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 7.3e-99 364.4 229 75.5
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 9.5e-99 364.0 229 75.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.2e-98 363.6 229 73.8
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.2e-98 363.6 233 73.4
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 1.6e-98 363.2 233 74.7
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.6e-98 363.2 221 79.2
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 2.1e-98 362.8 229 74.7
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 2.1e-98 362.8 229 74.7
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 2.1e-98 362.8 229 74.7
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 6.1e-98 361.3 241 73.0
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 6.1e-98 361.3 229 74.2
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 8.0e-98 360.9 229 75.1
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.0e-97 360.5 229 74.2
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.0e-97 360.5 233 73.8
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.4e-97 360.1 233 74.7
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.8e-97 359.8 229 74.2
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.8e-97 359.8 236 71.2
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 5.2e-97 358.2 229 73.8
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 6.8e-97 357.8 244 69.7
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 6.8e-97 357.8 255 70.2
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 8.9e-97 357.5 241 70.5
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 8.9e-97 357.5 234 73.1
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.2e-96 357.1 241 72.2
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.5e-96 356.7 229 75.1
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 2.0e-96 356.3 242 70.7
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.0e-96 356.3 229 72.1
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.0e-96 356.3 229 72.1
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 4.4e-96 355.1 229 72.9
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.4e-96 355.1 229 72.1
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 5.7e-96 354.8 229 72.1
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 7.5e-96 354.4 229 72.1
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 7.5e-96 354.4 226 73.9
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.7e-95 353.2 228 73.7
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.7e-95 353.2 229 73.4
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 2.9e-95 352.4 236 72.5
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 3.7e-95 352.1 229 72.1
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 4.9e-95 351.7 241 71.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 6.4e-95 351.3 229 72.5
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.4e-94 350.1 229 72.1
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.4e-94 350.1 271 63.5
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 2.4e-94 349.4 229 71.2
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 2.4e-94 349.4 230 73.5
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 2.4e-94 349.4 225 73.3
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 4.1e-94 348.6 223 73.5
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 5.4e-94 348.2 229 70.7
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 7.0e-94 347.8 229 70.7
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 2.7e-93 345.9 223 74.0
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 5.9e-93 344.7 247 66.4
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 7.8e-93 344.4 229 69.9
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.3e-92 343.6 229 69.4
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.3e-92 343.6 229 69.4
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.9e-92 342.0 227 69.2
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.4e-88 328.6 250 62.8
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 5.8e-88 328.2 275 61.8
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 2.2e-87 326.2 229 70.3
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.9e-87 325.1 226 70.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.2e-86 322.4 205 75.1
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 4.1e-86 322.0 233 67.4
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 5.4e-86 321.6 227 67.0
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 9.2e-86 320.9 227 67.8
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.0e-85 319.7 199 76.4
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.7e-85 319.3 227 67.0
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 2.3e-84 316.2 229 66.8
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 4.7e-82 308.5 244 60.7
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 6.2e-82 308.1 249 61.8
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.0e-80 303.1 258 58.9
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 5.8e-80 301.6 226 63.7
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.4e-78 297.0 191 75.4
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.2e-77 293.9 269 59.9
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.1e-75 287.3 221 63.3
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 3.3e-75 285.8 194 72.2
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 3.6e-74 282.3 233 62.2
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.1e-73 280.8 194 71.6
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 6.4e-71 271.6 247 51.4
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 7.1e-70 268.1 212 62.7
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 8.6e-68 261.2 151 77.5
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.1e-67 260.8 295 48.8
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.3e-67 258.8 195 70.3
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 2.9e-63 246.1 225 52.9
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 4.9e-63 245.4 158 71.5
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.6e-61 240.4 237 49.4
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.1e-58 229.9 224 50.9
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.8e-57 226.9 218 53.7
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.9e-55 219.5 195 62.1
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 1.1e-54 217.6 173 61.3
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 1.1e-54 217.6 173 61.3
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 2.4e-54 216.5 140 70.7
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.5e-40 170.6 122 68.9
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 3.8e-39 166.0 128 63.3
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 8.2e-34 148.3 164 48.2
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.8e-33 147.1 121 63.6
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.6e-29 134.0 93 71.0
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 3.7e-26 122.9 81 70.4
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 6.9e-25 118.6 61 88.5
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 9.1e-25 118.2 82 68.3
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.4e-24 116.3 71 71.8
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 8.2e-18 95.1 55 70.9
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 4.1e-17 92.8 99 54.5
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 2.7e-13 80.1 65 61.5
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.8e-12 77.4 152 32.2
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 8.2e-10 68.6 71 50.7


User provided reference genes

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