Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02125 Aquilegia oxysepala HOM05D002174 ORTHO05D005941 8.3e-79 297.0 150 100.0
Manes.01G174000 Manihot esculenta HOM05D002174 ORTHO05D005941 4.9e-31 138.3 145 48.3
Cfa009013 Carpinus fangiana HOM05D002174 ORTHO05D005941 1.2e-29 133.7 142 47.9
Manes.07G091400 Manihot esculenta HOM05D002174 ORTHO05D005941 2.7e-29 132.5 145 46.2
Manes.07G090900 Manihot esculenta HOM05D002174 ORTHO05D005941 3.5e-29 132.1 145 46.9
CANSAT54G0240 Cannabis sativa HOM05D002174 ORTHO05D005941 1.0e-28 130.6 142 47.2
DCAR_005338 Daucus carota HOM05D002174 ORTHO05D005941 1.0e-28 130.6 146 46.6
Prupe.6G077600 Prunus persica HOM05D002174 ORTHO05D005941 1.0e-28 130.6 142 47.2
Sabra16G0144700 Salix brachista HOM05D002174 ORTHO05D005941 1.0e-28 130.6 133 51.9
Duzib150G1375 Durio zibethinus HOM05D002174 ORTHO05D005941 1.3e-28 130.2 145 46.2
PSO339G1022 Papaver somniferum HOM05D002174 ORTHO05D005941 1.3e-28 130.2 145 47.6
Peaxi162Scf00587g00410 Petunia axillaris HOM05D002174 ORTHO05D005941 1.3e-28 130.2 142 47.2
SalBow3G3211 Salvia bowleyana HOM05D002174 ORTHO05D005941 1.3e-28 130.2 141 49.6
Hma1.2p1_0035F.1_g022420 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 1.8e-28 129.8 142 45.8
Os05g0111200 Oryza sativa ssp. japonica HOM05D002174 ORTHO05D005941 1.8e-28 129.8 144 44.4
Psat3g023760 Pisum sativum HOM05D002174 ORTHO05D005941 1.8e-28 129.8 142 47.2
QL01p032005 Quercus lobata HOM05D002174 ORTHO05D005941 2.3e-28 129.4 141 45.4
Sed0016872 Sechium edule HOM05D002174 ORTHO05D005941 3.0e-28 129.0 142 46.5
Cc01_g12870 Coffea canephora HOM05D002174 ORTHO05D005941 3.9e-28 128.6 139 46.8
Peaxi162Scf00032g02518 Petunia axillaris HOM05D002174 ORTHO05D005941 3.9e-28 128.6 142 46.5
THA.LOC104800661 Tarenaya hassleriana HOM05D002174 ORTHO05D005941 5.1e-28 128.3 139 47.5
Atru.chr3.3905 Acer truncatum HOM05D002174 ORTHO05D005941 1.5e-27 126.7 142 47.2
Cpa.g.sc81.151 Carica papaya HOM05D002174 ORTHO05D005941 1.5e-27 126.7 142 47.2
ECA236G0657 Erigeron canadensis HOM05D002174 ORTHO05D005941 1.5e-27 126.7 143 48.3
FvH4_3g36080 Fragaria vesca HOM05D002174 ORTHO05D005941 1.5e-27 126.7 145 45.5
Potri.001G239900 Populus trichocarpa HOM05D002174 ORTHO05D005941 1.5e-27 126.7 142 46.5
CiPaw.13G094300 Carya illinoinensis HOM05D002174 ORTHO05D005941 1.9e-27 126.3 142 45.8
CAN.G111.45 Capsicum annuum HOM05D002174 ORTHO05D005941 2.5e-27 125.9 142 45.8
CsaV3_1G034170 Cucumis sativus L. HOM05D002174 ORTHO05D005941 3.3e-27 125.6 142 46.5
FAN25G1103 Fragaria x ananassa HOM05D002174 ORTHO05D005941 3.3e-27 125.6 145 46.2
AUR62030424 Chenopodium quinoa HOM05D002174 ORTHO05D005941 5.6e-27 124.8 131 48.1
FAN16G0236 Fragaria x ananassa HOM05D002174 ORTHO05D005941 5.6e-27 124.8 145 45.5
RcHm_v2.0_Chr5g0064511 Rosa chinensis HOM05D002174 ORTHO05D005941 5.6e-27 124.8 142 45.8
Psat3g023720 Pisum sativum HOM05D002174 ORTHO05D005941 9.6e-27 124.0 142 47.2
Migut.D02101 Erythranthe guttata HOM05D002174 ORTHO05D005941 1.3e-26 123.6 137 45.3
PGSC0003DMG400009672 Solanum tuberosum HOM05D002174 ORTHO05D005941 1.3e-26 123.6 142 44.4
vmacro14518 Vaccinium macrocarpon HOM05D002174 ORTHO05D005941 1.3e-26 123.6 136 47.8
Lj3g0015229 Lotus japonicus HOM05D002174 ORTHO05D005941 1.6e-26 123.2 139 46.8
Medtr2g096920 Medicago truncatula HOM05D002174 ORTHO05D005941 1.6e-26 123.2 139 47.5
PGR119G2250 Punica granatum HOM05D002174 ORTHO05D005941 1.6e-26 123.2 149 45.0
Ca_01326_v3 Cicer arietinum L. HOM05D002174 ORTHO05D005941 2.1e-26 122.9 137 46.7
Hma1.2p1_0418F.1_g149160 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 2.1e-26 122.9 142 44.4
MD03G1093500 Malus domestica HOM05D002174 ORTHO05D005941 2.1e-26 122.9 142 45.8
FAN21G2955 Fragaria x ananassa HOM05D002174 ORTHO05D005941 2.8e-26 122.5 145 43.4
MD11G1108700 Malus domestica HOM05D002174 ORTHO05D005941 2.8e-26 122.5 142 46.5
CSS0007494 Camellia sinensis var. sinensis HOM05D002174 ORTHO05D005941 3.7e-26 122.1 142 46.5
Nitab4.5_0000272g0180 Nicotiana tabacum HOM05D002174 ORTHO05D005941 4.8e-26 121.7 156 42.9
ATR0559G109 Amborella trichopoda HOM05D002174 ORTHO05D005941 6.2e-26 121.3 137 44.5
BcaC02g11023 Brassica carinata HOM05D002174 ORTHO05D005941 6.2e-26 121.3 138 44.2
C04p22080 Brassica napus HOM05D002174 ORTHO05D005941 6.2e-26 121.3 138 44.2
BolC4t23731H Brassica oleracea HOM05D002174 ORTHO05D005941 6.2e-26 121.3 138 44.2
MD11G1108500 Malus domestica HOM05D002174 ORTHO05D005941 6.2e-26 121.3 142 46.5
Nitab4.5_0002836g0030 Nicotiana tabacum HOM05D002174 ORTHO05D005941 6.2e-26 121.3 153 42.5
TPR.G34323 Trifolium pratense HOM05D002174 ORTHO05D005941 6.2e-26 121.3 139 46.8
MD11G1108300 Malus domestica HOM05D002174 ORTHO05D005941 8.2e-26 120.9 142 45.1
Sopen06g001450 Solanum pennellii HOM05D002174 ORTHO05D005941 8.2e-26 120.9 142 44.4
Gohir.A07G098500 Gossypium hirsutum HOM05D002174 ORTHO05D005941 1.1e-25 120.6 142 43.7
Ah.12g058520 Amaranthus hybridus HOM05D002174 ORTHO05D005941 1.8e-25 119.8 134 44.8
Gorai.001G110700 Gossypium raimondii HOM05D002174 ORTHO05D005941 1.8e-25 119.8 142 43.7
Cfa011503 Carpinus fangiana HOM05D002174 ORTHO05D005941 3.1e-25 119.0 146 43.8
Ciclev10029517m.g Citrus clementina HOM05D002174 ORTHO05D005941 3.1e-25 119.0 139 42.4
Actinidia23940 Actinidia chinensis HOM05D002174 ORTHO05D005941 4.0e-25 118.6 142 44.4
MSTRG.17832 Avicennia marina HOM05D002174 ORTHO05D005941 4.0e-25 118.6 133 44.4
Sc07g0007940 Simmondsia chinensis HOM05D002174 ORTHO05D005941 4.0e-25 118.6 139 43.2
A07p19380 Brassica napus HOM05D002174 ORTHO05D005941 5.3e-25 118.2 138 43.5
BraA07t29643Z Brassica rapa HOM05D002174 ORTHO05D005941 5.3e-25 118.2 138 43.5
CDE09G0525 Ceratophyllum demersum HOM05D002174 ORTHO05D005941 5.3e-25 118.2 139 41.0
Eucgr.J02053 Eucalyptus grandis HOM05D002174 ORTHO05D005941 5.3e-25 118.2 142 43.0
Nn5g26914 Nelumbo nucifera HOM05D002174 ORTHO05D005941 5.3e-25 118.2 142 44.4
Sp4g11710 Schrenkiella parvula HOM05D002174 ORTHO05D005941 6.9e-25 117.9 131 45.0
Thecc.09G322000 Theobroma cacao HOM05D002174 ORTHO05D005941 6.9e-25 117.9 133 45.1
AUR62010472 Chenopodium quinoa HOM05D002174 ORTHO05D005941 9.0e-25 117.5 134 46.3
Thhalv10017379m.g Eutrema salsugineum HOM05D002174 ORTHO05D005941 9.0e-25 117.5 136 44.9
Glyma.13G336100 Glycine max HOM05D002174 ORTHO05D005941 9.0e-25 117.5 136 44.9
Glyma.15G038200 Glycine max HOM05D002174 ORTHO05D005941 9.0e-25 117.5 136 44.9
EL10Ac5g12576 Beta vulgaris HOM05D002174 ORTHO05D005941 1.5e-24 116.7 131 45.0
BcaB02g10211 Brassica carinata HOM05D002174 ORTHO05D005941 1.5e-24 116.7 138 42.0
DCAR_005971 Daucus carota HOM05D002174 ORTHO05D005941 1.5e-24 116.7 142 45.1
TPR.G34319 Trifolium pratense HOM05D002174 ORTHO05D005941 2.0e-24 116.3 132 46.2
Nn2g10364 Nelumbo nucifera HOM05D002174 ORTHO05D005941 2.6e-24 115.9 139 42.4
Psat5g284600 Pisum sativum HOM05D002174 ORTHO05D005941 2.6e-24 115.9 142 43.7
arahy.Tifrunner.gnm1.ann1.M8VE2Y Arachis hypogaea HOM05D002174 ORTHO05D005941 3.4e-24 115.5 155 41.9
CARHR122070 Cardamine hirsuta HOM05D002174 ORTHO05D005941 3.4e-24 115.5 138 42.0
Hund14299 Selenicereus undatus HOM05D002174 ORTHO05D005941 5.8e-24 114.8 134 45.5
arahy.Tifrunner.gnm1.ann1.X88BGH Arachis hypogaea HOM05D002174 ORTHO05D005941 7.6e-24 114.4 155 41.3
ClCG03G001540 Citrullus lanatus HOM05D002174 ORTHO05D005941 7.6e-24 114.4 168 38.7
Dinv42951 Davidia involucrata HOM05D002174 ORTHO05D005941 7.6e-24 114.4 139 44.6
Dinv43149 Davidia involucrata HOM05D002174 ORTHO05D005941 7.6e-24 114.4 139 44.6
TWI79G0621 Tripterygium wilfordii HOM05D002174 ORTHO05D005941 7.6e-24 114.4 143 43.4
GSVIVG01024962001 Vitis vinifera HOM05D002174 ORTHO05D005941 7.6e-24 114.4 126 47.6
PSO384G4692 Papaver somniferum HOM05D002174 ORTHO05D005941 1.0e-23 114.0 145 44.8
Carub.0004s0989 Capsella rubella HOM05D002174 ORTHO05D005941 2.2e-23 112.8 138 41.3
TAR633G2335 Trochodendron aralioides HOM05D002174 ORTHO05D005941 2.2e-23 112.8 142 45.8
CSS0035653 Camellia sinensis var. sinensis HOM05D002174 ORTHO05D005941 2.9e-23 112.5 142 45.1
Medtr2g096900 Medicago truncatula HOM05D002174 ORTHO05D005941 4.9e-23 111.7 132 47.7
SEGI_11453 Sequoiadendron giganteum HOM05D002174 ORTHO05D005941 4.9e-23 111.7 145 40.7
VMungo1080G1891 Vigna mungo HOM05D002174 ORTHO05D005941 6.5e-23 111.3 135 43.7
Haze_12046 Corylus avellana HOM05D002174 ORTHO05D005941 1.9e-22 109.8 193 35.8
AT2G28900 Arabidopsis thaliana HOM05D002174 ORTHO05D005941 2.5e-22 109.4 138 41.3
AL4G23430 Arabidopsis lyrata HOM05D002174 ORTHO05D005941 3.2e-22 109.0 138 41.3
Phvul.L005543 Phaseolus vulgaris HOM05D002174 ORTHO05D005941 3.2e-22 109.0 136 41.9
Lalb_Chr14g0375101 Lupinus albus HOM05D002174 ORTHO05D005941 4.2e-22 108.6 139 41.0
Glyma.02G184800 Glycine max HOM05D002174 ORTHO05D005941 7.1e-22 107.8 136 40.4
Aa31LG5G7320 Aethionema arabicum HOM05D002174 ORTHO05D005941 1.2e-21 107.1 147 40.8
FAN11G2331 Fragaria x ananassa HOM05D002174 ORTHO05D005941 3.5e-21 105.5 183 35.5
CDE04G1891 Ceratophyllum demersum HOM05D002174 ORTHO05D005941 7.9e-21 104.4 139 41.7
MELO3C020637.2 Cucumis melo HOM05D002174 ORTHO05D005941 5.7e-19 98.2 142 38.0
Hma1.2p1_1542F.1_g289710 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 8.2e-18 94.4 107 43.9
Rhsim01G0227500 Rhododendron simsii HOM05D002174 ORTHO05D005941 1.4e-17 93.6 117 46.2
Sabra16G0144600 Salix brachista HOM05D002174 ORTHO05D005941 2.4e-17 92.8 146 41.1
Mapoly0051s0077 Marchantia polymorpha HOM05D002174 ORTHO05D005941 5.3e-17 91.7 140 37.1
SMO358G0445 Selaginella moellendorffii HOM05D002174 ORTHO05D005941 2.6e-16 89.4 141 37.6
Mapoly0133s0032 Marchantia polymorpha HOM05D002174 ORTHO05D005941 3.4e-16 89.0 139 35.3
RcHm_v2.0_Chr4g0412121 Rosa chinensis HOM05D002174 ORTHO05D005941 4.5e-16 88.6 129 37.2
TAR636G3015 Trochodendron aralioides HOM05D002174 ORTHO05D005941 4.5e-16 88.6 76 55.3
SMO358G0166 Selaginella moellendorffii HOM05D002174 ORTHO05D005941 5.9e-16 88.2 145 35.2
MBI14_g20104_MAGBIO Magnolia biondii HOM05D002174 ORTHO05D005941 7.6e-16 87.8 79 50.6
Oeu053913.2 Olea europaea HOM05D002174 ORTHO05D005941 7.6e-16 87.8 139 39.6
AagrBONN_evm.TU.Sc2ySwM_228.3892 Anthoceros agrestis HOM05D002174 ORTHO05D005941 3.8e-15 85.5 140 34.3
FAN07G0871 Fragaria x ananassa HOM05D002174 ORTHO05D005941 5.0e-15 85.1 124 36.3
Pp3c17_23180 Physcomitrium patens HOM05D002174 ORTHO05D005941 6.5e-15 84.7 139 31.7
Pp3c12_16880 Physcomitrium patens HOM05D002174 ORTHO05D005941 1.1e-14 84.0 140 33.6
Hma1.2p1_0418F.1_g149170 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 3.2e-14 82.4 78 48.7
AagrBONN_evm.TU.Sc2ySwM_117.346 Anthoceros agrestis HOM05D001717 ORTHO05D007217 4.2e-14 82.0 138 32.6
Mapoly0097s0034 Marchantia polymorpha HOM05D002174 ORTHO05D005941 5.5e-14 81.6 139 31.7
Pp3c3_28050 Physcomitrium patens HOM05D002174 ORTHO05D005941 9.3e-14 80.9 131 34.4
Nn5g26913 Nelumbo nucifera HOM05D002174 ORTHO05D005941 1.6e-13 80.1 92 43.5
Zm00001eb266860 Zea mays HOM05D002174 ORTHO05D005941 2.7e-13 79.3 96 40.6
Hma1.2p1_0418F.1_g149180 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 3.6e-13 79.0 78 47.4
Zm00001eb355790 Zea mays HOM05D002174 ORTHO05D005941 6.1e-13 78.2 93 39.8
Pp3c1_40570 Physcomitrium patens HOM05D002174 ORTHO05D005941 1.8e-12 76.6 136 30.1
Os01g0974100 Oryza sativa ssp. japonica HOM05D002174 ORTHO05D005941 5.1e-12 75.1 92 40.2
Aqoxy4G02927 Aquilegia oxysepala HOM05D002174 ORTHO05D005941 8.8e-12 74.3 110 34.5
unitig_747.g22031 Utricularia gibba HOM05D002174 ORTHO05D005941 1.1e-11 73.9 169 29.6
SEGI_00670 Sequoiadendron giganteum HOM05D002174 ORTHO05D005941 1.9e-11 73.2 131 31.3
Dinv12425 Davidia involucrata HOM05D002174 ORTHO05D005941 2.5e-11 72.8 142 31.7
Dinv17002 Davidia involucrata HOM05D002174 ORTHO05D005941 3.3e-11 72.4 92 40.2
SMO147G0258 Selaginella moellendorffii HOM05D002174 ORTHO05D005941 4.3e-11 72.0 136 30.1
Gohir.D07G102800 Gossypium hirsutum HOM05D002174 ORTHO05D005941 4.8e-10 68.6 95 37.9
CDE01G0513 Ceratophyllum demersum HOM05D002174 ORTHO05D005447 1.4e-09 67.0 124 31.5
Pp3c2_610 Physcomitrium patens HOM05D002174 ORTHO05D005941 2.4e-09 66.2 137 28.5
FAN12G1542 Fragaria x ananassa HOM05D002174 ORTHO05D005941 1.2e-08 63.9 77 39.0
Gohir.A09G235200 Gossypium hirsutum HOM05D002174 ORTHO05D005447 2.0e-08 63.2 152 28.9
Gohir.D09G236000 Gossypium hirsutum HOM05D002174 ORTHO05D005447 2.0e-08 63.2 152 28.9
Gorai.006G259100 Gossypium raimondii HOM05D002174 ORTHO05D005447 7.7e-08 61.2 152 28.3
Zm00001eb266870 Zea mays HOM05D002174 ORTHO05D005941 1.3e-07 60.5 123 30.9
Lalb_Chr07g0182101 Lupinus albus HOM05D002174 ORTHO05D005447 5.0e-07 58.5 153 28.1
Zm00001eb130200 Zea mays HOM05D002174 ORTHO05D005447 2.5e-06 56.2 154 29.2
arahy.Tifrunner.gnm1.ann1.XZ5MVW Arachis hypogaea HOM05D002174 ORTHO05D005447 4.2e-06 55.5 153 28.1
Atru.chr4.2988 Acer truncatum HOM05D002174 ORTHO05D005447 5.5e-06 55.1 151 28.5
Pp3c3_19150 Physcomitrium patens HOM05D002174 ORTHO05D005941 7.2e-06 54.7 90 31.1
unitig_32.g10635 Utricularia gibba HOM05D002174 ORTHO05D005447 9.4e-06 54.3 139 29.5


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