Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02062 Aquilegia oxysepala HOM05D000245 ORTHO05D002300 2.4e-87 325.5 165 100.0
Aqoxy2G02063 Aquilegia oxysepala HOM05D000497 ORTHO05D002300 1.0e-13 80.9 126 42.9
Aqoxy3G00313 Aquilegia oxysepala HOM05D000497 ORTHO05D002300 4.8e-11 72.0 223 31.4
BcaB02g07024 Brassica carinata HOM05D000661 ORTHO05D000502 1.7e-08 63.5 99 38.4
A07p28820 Brassica napus HOM05D000661 ORTHO05D000502 1.7e-08 63.5 99 38.4
BraA07t30525Z Brassica rapa HOM05D000661 ORTHO05D000502 1.7e-08 63.5 99 38.4
BcaC08g45578 Brassica carinata HOM05D000661 ORTHO05D000502 1.4e-07 60.5 99 37.4
BolC6t38382H Brassica oleracea HOM05D000661 ORTHO05D000502 1.4e-07 60.5 99 37.4
AL3G53310 Arabidopsis lyrata HOM05D000245 ORTHO05D010705 1.9e-07 60.1 53 54.7
C07p55150 Brassica napus HOM05D000245 ORTHO05D010705 1.9e-07 60.1 53 54.7
C07p55170 Brassica napus HOM05D000245 ORTHO05D010705 1.9e-07 60.1 53 54.7
BolC7t45995H Brassica oleracea HOM05D000115 ORTHO05D010705 1.9e-07 60.1 53 54.7
BolC7t45998H Brassica oleracea HOM05D000245 ORTHO05D010705 1.9e-07 60.1 53 54.7
Carub.0002s2235 Capsella rubella HOM05D000661 ORTHO05D000502 1.9e-07 60.1 99 38.4
CDE07G1805 Ceratophyllum demersum HOM05D000497 ORTHO05D002300 1.9e-07 60.1 100 37.0
QL12p005614 Quercus lobata HOM05D000661 ORTHO05D000502 1.9e-07 60.1 146 33.6
Thhalv10019142m.g Eutrema salsugineum HOM05D000661 ORTHO05D000502 2.5e-07 59.7 99 38.4
AL2G35470 Arabidopsis lyrata HOM05D000661 ORTHO05D000502 4.2e-07 58.9 99 38.4
TAR374G0492 Trochodendron aralioides HOM05D000497 ORTHO05D002300 4.2e-07 58.9 126 35.7
HPP92_020142 Vanilla planifolia HOM05D000497 ORTHO05D002300 4.2e-07 58.9 58 53.4
BcaC06g32728 Brassica carinata HOM05D000245 ORTHO05D010705 5.5e-07 58.5 53 52.8
AT2G20350 Arabidopsis thaliana HOM05D000245 ORTHO05D010705 7.1e-07 58.2 68 48.5
BcaB03g12507 Brassica carinata HOM05D000245 ORTHO05D010705 7.1e-07 58.2 49 53.1
A03p56900 Brassica napus HOM05D000245 ORTHO05D010705 9.3e-07 57.8 61 49.2
BraA03t14761Z Brassica rapa HOM05D000245 ORTHO05D010705 9.3e-07 57.8 61 49.2
PSO478G4044 Papaver somniferum HOM05D000245 ORTHO05D002300 9.3e-07 57.8 120 30.0
Thecc.05G082900 Theobroma cacao HOM05D000078 ORTHO05D000025 9.3e-07 57.8 70 38.6
TPR.G27809 Trifolium pratense HOM05D000497 ORTHO05D002300 9.3e-07 57.8 113 37.2
A07p16920 Brassica napus HOM05D000245 ORTHO05D010705 1.2e-06 57.4 53 47.2
BraA02t07035Z Brassica rapa HOM05D000661 ORTHO05D000502 1.2e-06 57.4 103 38.8
BraA07t29418Z Brassica rapa HOM05D000245 ORTHO05D010705 1.2e-06 57.4 53 47.2
AT5G67010 Arabidopsis thaliana HOM05D000245 ORTHO05D010705 1.6e-06 57.0 68 44.1
Glyma.07G091100 Glycine max HOM05D016665 ORTHO05D017046 1.6e-06 57.0 67 52.2
Sc13g0001920 Simmondsia chinensis HOM05D000661 ORTHO05D000502 1.6e-06 57.0 88 38.6
BcaC06g34777 Brassica carinata HOM05D000245 ORTHO05D010705 2.1e-06 56.6 55 45.5
C07p24740 Brassica napus HOM05D000245 ORTHO05D010705 2.1e-06 56.6 55 45.5
BolC7t42994H Brassica oleracea HOM05D000245 ORTHO05D010705 2.1e-06 56.6 55 45.5
BolC7t45997H Brassica oleracea HOM05D000245 ORTHO05D010705 2.1e-06 56.6 53 50.9
Lj4g0002903 Lotus japonicus HOM05D000245 ORTHO05D000020 2.1e-06 56.6 48 56.2
PSO017G6631 Papaver somniferum HOM05D000245 ORTHO05D002300 2.1e-06 56.6 120 29.2
Peaxi162Scf00071g00172 Petunia axillaris HOM05D000661 ORTHO05D000502 2.1e-06 56.6 122 32.8
Rhsim04G0147200 Rhododendron simsii HOM05D046665 ORTHO05D002300 2.1e-06 56.6 48 54.2
AT1G68550 Arabidopsis thaliana HOM05D000497 ORTHO05D002300 2.7e-06 56.2 43 67.4
CDE09G0411 Ceratophyllum demersum HOM05D000497 ORTHO05D000020 2.7e-06 56.2 60 53.3
TAR622G1395 Trochodendron aralioides HOM05D000497 ORTHO05D002300 2.7e-06 56.2 107 38.3
HPP92_006393 Vanilla planifolia HOM05D000497 ORTHO05D002300 2.7e-06 56.2 109 35.8
Atru.chr9.1825 Acer truncatum HOM05D001032 ORTHO05D000907 3.5e-06 55.8 101 36.6
AT1G75490 Arabidopsis thaliana HOM05D000661 ORTHO05D000502 3.5e-06 55.8 73 45.2
BcaC07g38246 Brassica carinata HOM05D000245 ORTHO05D010705 3.5e-06 55.8 70 42.9
C08p09950 Brassica napus HOM05D000245 ORTHO05D010705 3.5e-06 55.8 70 42.9
BolC8t48672H Brassica oleracea HOM05D000245 ORTHO05D010705 3.5e-06 55.8 70 42.9
Carub.0006s1671 Capsella rubella HOM05D000661 ORTHO05D000502 3.5e-06 55.8 46 60.9
Cc06_g16660 Coffea canephora HOM05D000661 ORTHO05D000502 3.5e-06 55.8 84 38.1
Sp5g23640 Schrenkiella parvula HOM05D000497 ORTHO05D002300 3.5e-06 55.8 40 65.0
TAR371G0755 Trochodendron aralioides HOM05D000497 ORTHO05D002300 3.5e-06 55.8 188 31.4
Zm00001eb309590 Zea mays HOM05D000497 ORTHO05D000020 3.5e-06 55.8 53 45.3
CSS0010051 Camellia sinensis var. sinensis HOM05D000661 ORTHO05D000502 4.6e-06 55.5 88 34.1
CARHR280660 Cardamine hirsuta HOM05D000245 ORTHO05D010705 4.6e-06 55.5 68 42.6
Cfa016555 Carpinus fangiana HOM05D000078 ORTHO05D000025 4.6e-06 55.5 69 40.6
ClCG05G022760 Citrullus lanatus HOM05D000497 ORTHO05D002300 4.6e-06 55.5 75 41.3
Dinv18078 Davidia involucrata HOM05D002477 ORTHO05D000502 4.6e-06 55.5 88 36.4
Thhalv10005619m.g Eutrema salsugineum HOM05D000245 ORTHO05D010705 4.6e-06 55.5 52 50.0
Lj4C32G1 Lonicera japonica HOM05D000661 ORTHO05D000502 4.6e-06 55.5 63 50.8
Nitab4.5_0006541g0020 Nicotiana tabacum HOM05D000661 ORTHO05D000502 4.6e-06 55.5 147 30.6
Sp1g36010 Schrenkiella parvula HOM05D000497 ORTHO05D018466 4.6e-06 55.5 79 41.8
BcaB05g24912 Brassica carinata HOM05D000661 ORTHO05D000502 6.0e-06 55.1 67 46.3
BcaC06g32729 Brassica carinata HOM05D000245 ORTHO05D010705 6.0e-06 55.1 61 45.9
A07p41030 Brassica napus HOM05D000661 ORTHO05D000502 6.0e-06 55.1 51 54.9
C02p32650 Brassica napus HOM05D000661 ORTHO05D000502 6.0e-06 55.1 67 46.3
BolC6t39988H Brassica oleracea HOM05D000661 ORTHO05D000502 6.0e-06 55.1 51 54.9
BraA07t31641Z Brassica rapa HOM05D000661 ORTHO05D000502 6.0e-06 55.1 51 54.9
CARHR068890 Cardamine hirsuta HOM05D000661 ORTHO05D000502 6.0e-06 55.1 67 47.8
CARHR134380 Cardamine hirsuta HOM05D000245 ORTHO05D010705 6.0e-06 55.1 65 44.6
Cfa006311 Carpinus fangiana HOM05D000661 ORTHO05D000502 6.0e-06 55.1 48 56.2
Cfa016553 Carpinus fangiana HOM05D000078 ORTHO05D000025 6.0e-06 55.1 69 40.6
CiPaw.15G129900 Carya illinoinensis HOM05D000497 ORTHO05D002300 6.0e-06 55.1 149 32.2
Haze_18665 Corylus avellana HOM05D000497 ORTHO05D002300 6.0e-06 55.1 55 50.9
Haze_18667 Corylus avellana HOM05D000497 ORTHO05D002300 6.0e-06 55.1 55 50.9
DCAR_016997 Daucus carota HOM05D000661 ORTHO05D000502 6.0e-06 55.1 78 37.2
ECA233G2743 Erigeron canadensis HOM05D000497 ORTHO05D002300 6.0e-06 55.1 101 36.6
Hma1.2p1_0621F.1_g190770 Hydrangea macrophylla HOM05D000661 ORTHO05D000502 6.0e-06 55.1 88 36.4
MD13G1042600 Malus domestica HOM05D000497 ORTHO05D002300 6.0e-06 55.1 93 38.7
THA.LOC104809063 Tarenaya hassleriana HOM05D000661 ORTHO05D000502 6.0e-06 55.1 51 54.9
TAR371G0284 Trochodendron aralioides HOM05D000497 ORTHO05D002300 6.0e-06 55.1 192 32.3
Aa31LG4G5730 Aethionema arabicum HOM05D000661 ORTHO05D000502 7.9e-06 54.7 73 42.5
Aa31sc621G10 Aethionema arabicum HOM05D000497 ORTHO05D002300 7.9e-06 54.7 46 60.9
Aqoxy5G04110 Aquilegia oxysepala HOM05D000497 ORTHO05D000020 7.9e-06 54.7 136 29.4
AT1G43160 Arabidopsis thaliana HOM05D000245 ORTHO05D000020 7.9e-06 54.7 111 36.0
BcaB03g15425 Brassica carinata HOM05D011059 ORTHO05D002300 7.9e-06 54.7 44 59.1
BcaB08g36678 Brassica carinata HOM05D000661 ORTHO05D000502 7.9e-06 54.7 51 52.9
CSS0037688 Camellia sinensis var. sinensis HOM05D000661 ORTHO05D000502 7.9e-06 54.7 154 31.8
CANSAT54G2182 Cannabis sativa HOM05D000497 ORTHO05D000020 7.9e-06 54.7 158 32.3
Carub.0008s2749 Capsella rubella HOM05D000245 ORTHO05D010705 7.9e-06 54.7 49 49.0
Carub.0008s2750 Capsella rubella HOM05D000245 ORTHO05D010705 7.9e-06 54.7 69 42.0
Cfa019784 Carpinus fangiana HOM05D000497 ORTHO05D002300 7.9e-06 54.7 64 48.4
CDE02G4115 Ceratophyllum demersum HOM05D000497 ORTHO05D000020 7.9e-06 54.7 57 49.1
CsaV3_5G034270 Cucumis sativus L. HOM05D000497 ORTHO05D002300 7.9e-06 54.7 74 40.5
Eucgr.A02390 Eucalyptus grandis HOM05D000661 ORTHO05D000502 7.9e-06 54.7 58 46.6
Thhalv10009619m.g Eutrema salsugineum HOM05D000497 ORTHO05D002300 7.9e-06 54.7 55 52.7
PSO349G0181 Papaver somniferum HOM05D000661 ORTHO05D000502 7.9e-06 54.7 56 51.8
Peaxi162Scf02133g00004 Petunia axillaris HOM05D000609 ORTHO05D000462 7.9e-06 54.7 156 30.8
Rhsim09G0108500 Rhododendron simsii HOM05D000497 ORTHO05D002300 7.9e-06 54.7 56 51.8
Sp1g22740 Schrenkiella parvula HOM05D000497 ORTHO05D002300 7.9e-06 54.7 60 50.0
Sp6g25870 Schrenkiella parvula HOM05D000661 ORTHO05D000502 7.9e-06 54.7 51 52.9


User provided reference genes

Program Settings