Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 0.0e+00 1468.8 740 100.0
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 3.2e-256 888.6 750 62.1
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 4.2e-256 888.3 742 62.0
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 5.5e-240 834.7 723 60.3
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 1.2e-239 833.6 725 59.7
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 7.6e-234 814.3 782 55.0
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 7.1e-232 807.7 778 55.1
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 9.3e-232 807.4 812 53.2
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 2.3e-230 802.7 747 56.6
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 2.2e-228 796.2 751 55.1
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 1.1e-227 793.9 746 56.7
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 1.1e-224 783.9 749 55.1
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 2.5e-224 782.7 729 56.7
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 6.1e-223 778.1 751 54.5
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 3.8e-217 758.8 747 56.0
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 5.5e-216 755.0 746 55.1
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 2.6e-210 736.1 742 54.3
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 3.8e-209 732.3 742 53.9
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 4.4e-205 718.8 726 53.4
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 1.7e-204 716.8 736 52.9
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 2.4e-203 713.0 661 57.0
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 1.8e-198 696.8 708 53.4
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 2.2e-196 689.9 754 50.7
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 3.7e-196 689.1 815 48.7
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 4.1e-195 685.6 740 49.9
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 4.5e-194 682.2 731 49.9
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 8.5e-193 677.9 747 49.3
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 1.1e-192 677.6 750 49.6
Peaxi162Scf00046g02624 Petunia axillaris HOM05D005820 ORTHO05D007116 9.4e-192 674.5 742 49.1
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 1.2e-191 674.1 750 49.5
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 2.1e-191 673.3 755 50.1
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 3.6e-191 672.5 732 50.4
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 6.1e-191 671.8 747 48.6
FAN01G2368 Fragaria x ananassa HOM05D005820 ORTHO05D007116 1.2e-189 667.5 750 49.3
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 2.6e-189 666.4 753 48.2
FvH4_7g34260 Fragaria vesca HOM05D005820 ORTHO05D007116 3.4e-189 666.0 750 49.1
RcHm_v2.0_Chr1g0384611 Rosa chinensis HOM05D005820 ORTHO05D007116 3.4e-189 666.0 749 49.1
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 2.8e-188 662.9 728 50.3
FAN03G2216 Fragaria x ananassa HOM05D005820 ORTHO05D007116 8.3e-188 661.4 760 48.8
Os10g0402200 Oryza sativa ssp. japonica HOM05D005820 ORTHO05D007116 4.1e-187 659.1 738 46.6
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 5.4e-187 658.7 745 49.5
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 7.0e-187 658.3 680 52.5
ATR0829G080 Amborella trichopoda HOM05D005820 ORTHO05D007116 9.1e-187 657.9 729 48.4
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 9.1e-187 657.9 750 47.5
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 2.7e-186 656.4 747 49.0
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 1.0e-185 654.4 747 47.7
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 1.0e-185 654.4 736 49.3
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 2.3e-185 653.3 747 49.7
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 3.0e-182 642.9 743 47.9
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 3.0e-182 642.9 726 48.9
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 1.2e-181 641.0 746 46.4
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 4.4e-181 639.0 748 46.8
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 5.7e-181 638.6 747 46.9
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 7.5e-181 638.3 748 47.5
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 7.5e-181 638.3 746 46.4
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 1.8e-179 633.6 769 45.8
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 3.1e-179 632.9 748 46.8
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 5.4e-179 632.1 733 45.7
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 1.2e-178 630.9 745 47.1
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 3.5e-178 629.4 793 44.5
Lsat_1_v5_gn_9_46201 Lactuca sativa HOM05D005820 ORTHO05D007116 1.7e-177 627.1 749 46.9
MSTRG.19155 Avicennia marina HOM05D005820 ORTHO05D007116 6.6e-177 625.2 748 47.7
Migut.J00550 Erythranthe guttata HOM05D005820 ORTHO05D007116 1.5e-176 624.0 756 46.2
HPP92_000954 Vanilla planifolia HOM05D005820 ORTHO05D007116 6.1e-175 618.6 747 46.7
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 1.5e-173 614.0 793 44.0
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 5.8e-173 612.1 715 47.4
Eucgr.A02992 Eucalyptus grandis HOM05D005820 ORTHO05D007116 2.9e-172 609.8 732 45.9
Rhsim03G0224500 Rhododendron simsii HOM05D005820 ORTHO05D007116 8.3e-172 608.2 756 45.4
TPR.G19809 Trifolium pratense HOM05D005820 ORTHO05D007116 1.1e-171 607.8 709 46.7
Prupe.2G329300 Prunus persica HOM05D005820 ORTHO05D007116 2.1e-167 593.6 741 46.8
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 1.1e-166 591.3 700 46.9
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 4.0e-166 589.3 614 52.0
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 2.0e-165 587.0 700 46.4
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 8.3e-164 581.6 728 44.5
SGA_v2.0_scaffold75G24867 Striga asiatica HOM05D005820 ORTHO05D007116 1.4e-163 580.9 755 45.3
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 1.9e-163 580.5 721 45.4
FAN10G1332 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.4e-163 580.1 709 47.1
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 3.3e-160 569.7 746 43.3
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 6.8e-158 562.0 717 44.9
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 1.3e-156 557.8 689 45.0
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 3.3e-144 516.5 448 59.4
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 1.1e-136 491.5 583 46.7
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 1.4e-123 448.0 553 47.0
CAN.G103.20 Capsicum annuum HOM05D005820 ORTHO05D007116 1.1e-120 438.3 579 43.9
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 1.9e-120 437.6 569 43.8
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 1.3e-119 434.9 433 54.3
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 1.5e-117 427.9 501 49.5
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 1.7e-116 424.5 526 46.4
AUR62042764 Chenopodium quinoa HOM05D005820 ORTHO05D007116 1.8e-113 414.5 582 41.8
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 3.3e-112 410.2 745 37.2
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 5.0e-108 396.4 427 50.1
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 1.2e-106 391.7 350 58.9
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis HOM05D005820 ORTHO05D007116 9.1e-102 375.6 686 32.9
Mapoly0140s0032 Marchantia polymorpha HOM05D005820 ORTHO05D007116 2.1e-98 364.4 810 32.2
Ca_03104_v3 Cicer arietinum L. HOM05D005820 ORTHO05D007116 3.0e-97 360.5 431 47.1
SalBow3G3950 Salvia bowleyana HOM05D005820 ORTHO05D007116 3.5e-93 347.1 547 41.0
PGSC0003DMG402015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 1.0e-92 345.5 353 51.3
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 1.4e-91 341.7 377 50.9
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 2.5e-91 340.9 353 51.6
PGSC0003DMG401015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 3.0e-89 334.0 334 52.4
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 1.7e-87 328.2 285 60.4
SMO203G0218 Selaginella moellendorffii HOM05D005820 ORTHO05D007116 1.7e-87 328.2 701 30.1
SHI15005 Sapria himalayana HOM05D005820 ORTHO05D007116 2.8e-87 327.4 346 50.9
Pp3c16_7630 Physcomitrium patens HOM05D005820 ORTHO05D007116 8.5e-84 315.8 944 27.3
arahy.Tifrunner.gnm1.ann1.86ZX86 Arachis hypogaea HOM05D005820 ORTHO05D007116 2.5e-83 314.3 369 44.7
MD01G1239300 Malus domestica HOM05D005820 ORTHO05D007116 1.1e-67 262.3 511 35.6
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 5.5e-67 260.0 258 56.6
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 8.0e-66 256.1 259 55.2
Ciclev10032799m.g Citrus clementina HOM05D005820 ORTHO05D007116 1.3e-63 248.8 194 59.8
CBR_g52284 Chara braunii HOM05D005820 ORTHO05D007116 4.5e-61 240.4 979 24.0
Oeu046340.1 Olea europaea HOM05D005820 ORTHO05D007116 2.0e-56 224.9 160 66.9
CAN.G824.56 Capsicum annuum HOM05D005820 ORTHO05D007116 6.4e-55 219.9 159 66.7
Lalb_Chr01g0000771 Lupinus albus HOM05D005820 ORTHO05D007116 2.0e-53 214.9 162 61.7
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea HOM05D005820 ORTHO05D007116 1.8e-49 201.8 715 27.4
Cpa.g.sc43.143 Carica papaya HOM05D005820 ORTHO05D007116 2.0e-48 198.4 263 43.3
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea HOM05D005820 ORTHO05D007116 9.2e-46 189.5 310 39.0
Nitab4.5_0010710g0040 Nicotiana tabacum HOM05D005820 ORTHO05D007116 1.2e-45 189.1 142 66.2
Lj3A884T57 Lonicera japonica HOM05D005820 ORTHO05D007116 4.6e-45 187.2 278 42.4
Oeu001352.2 Olea europaea HOM05D005820 ORTHO05D007116 1.5e-43 182.2 265 40.8
SEGI_39455 Sequoiadendron giganteum HOM05D005820 ORTHO05D007116 3.8e-31 141.0 163 46.6
Hma1.2p1_0419F.1_g149520 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 7.8e-29 133.3 117 53.8
AUR62022348 Chenopodium quinoa HOM05D005820 ORTHO05D007116 2.4e-22 111.7 98 61.2
CAN.G557.3 Capsicum annuum HOM05D005820 ORTHO05D007116 9.3e-22 109.8 140 45.7
Ah.10g032150 Amaranthus hybridus HOM05D005820 ORTHO05D007116 1.5e-11 75.9 199 25.6
SHI15006 Sapria himalayana HOM05D005820 ORTHO05D007116 2.4e-09 68.6 180 28.9
CAN.G159.6 Capsicum annuum HOM05D001691 ORTHO05D007116 1.3e-07 62.8 163 30.1
COL.COLO4_37046 Corchorus olitorius HOM05D005820 ORTHO05D007116 1.3e-07 62.8 35 74.3
CAN.G1793.2 Capsicum annuum HOM05D005820 ORTHO05D007116 1.7e-07 62.4 45 60.0
arahy.Tifrunner.gnm1.ann1.DVH85A Arachis hypogaea HOM05D005820 ORTHO05D007116 4.2e-06 57.8 66 42.4


User provided reference genes

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