Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 0.0e+00 1353.2 676 100.0
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 9.2e-210 734.2 660 57.7
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 1.9e-194 683.3 679 53.8
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 7.1e-186 654.8 670 53.6
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 1.8e-181 640.2 664 51.4
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 2.6e-180 636.3 654 53.1
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 4.4e-180 635.6 672 50.4
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 2.9e-179 632.9 673 51.1
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 1.1e-178 630.9 667 51.3
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.2e-177 627.5 668 50.3
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 3.5e-177 625.9 668 51.0
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.3e-176 624.0 669 50.5
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 1.7e-176 623.6 672 51.0
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 1.5e-175 620.5 657 50.4
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 2.8e-174 616.3 669 49.6
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 2.8e-174 616.3 654 50.5
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 6.2e-174 615.1 673 49.3
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 6.9e-173 611.7 531 61.8
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.5e-172 610.5 667 49.9
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 2.0e-172 610.1 667 49.8
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 2.6e-172 609.8 661 48.6
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 5.8e-172 608.6 661 49.5
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 9.9e-172 607.8 671 49.6
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 3.8e-171 605.9 663 49.2
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 1.3e-168 597.4 662 48.3
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 2.3e-168 596.7 659 49.2
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 3.3e-167 592.8 673 49.0
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 1.8e-165 587.0 694 47.4
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 4.9e-163 578.9 652 48.8
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 5.4e-162 575.5 700 46.6
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 9.3e-162 574.7 660 47.6
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 1.2e-161 574.3 658 48.5
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.6e-161 573.9 689 46.9
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 3.9e-160 569.3 660 48.0
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 6.7e-160 568.5 657 47.6
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 2.5e-159 566.6 663 47.1
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 2.0e-156 557.0 668 47.5
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 1.3e-155 554.3 670 46.9
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 2.2e-155 553.5 611 49.4
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 6.5e-155 552.0 656 45.9
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 1.9e-154 550.4 672 45.8
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 2.5e-154 550.1 682 45.3
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 6.9e-149 531.9 660 43.8
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 2.2e-147 526.9 667 44.4
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 2.5e-146 523.5 673 45.0
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 2.1e-145 520.4 677 43.7
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 3.5e-145 519.6 664 43.8
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 5.1e-144 515.8 660 44.2
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 3.3e-143 513.1 660 43.9
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 4.8e-142 509.2 652 44.2
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 6.3e-142 508.8 648 44.4
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 1.5e-140 504.2 767 40.8
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 5.9e-140 502.3 658 43.3
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 7.7e-140 501.9 652 42.8
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 1.0e-139 501.5 565 48.1
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 8.5e-139 498.4 483 55.1
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 2.5e-138 496.9 662 42.4
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 3.2e-138 496.5 656 42.1
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 1.2e-137 494.6 662 41.8
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 2.7e-137 493.4 700 40.7
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 1.4e-136 491.1 662 42.3
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 1.4e-136 491.1 482 52.9
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 3.3e-135 486.5 694 40.8
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 5.1e-128 462.6 605 43.6
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 8.8e-128 461.8 531 49.5
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 1.2e-124 451.4 528 48.7
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 1.5e-124 451.1 670 40.7
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 1.0e-123 448.4 653 41.3
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 1.4e-120 438.0 419 58.2
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 3.0e-120 436.8 568 44.7
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 1.2e-113 414.8 522 46.4
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 2.7e-113 413.7 625 41.6
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 1.2e-111 408.3 467 48.4
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 5.7e-111 406.0 523 45.1
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 1.5e-106 391.3 339 58.4
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 2.0e-103 380.9 539 42.5
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.0e-95 354.4 283 61.5
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 1.4e-85 321.6 372 50.5
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 2.7e-84 317.4 446 43.9
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 5.6e-66 256.5 251 55.0
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 1.1e-58 232.3 663 30.9
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 5.4e-53 213.4 637 29.2
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 1.3e-51 208.8 320 39.4
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 2.3e-51 208.0 170 58.8
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 1.9e-50 204.9 171 62.6
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 1.6e-49 201.8 494 32.6
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 2.6e-47 194.5 197 54.3
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 1.4e-45 188.7 595 27.1
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 3.4e-39 167.5 217 44.2
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 7.4e-34 149.8 140 54.3
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 1.3e-33 149.1 202 45.0
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.5e-31 140.6 122 54.1
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 3.2e-29 134.4 124 54.0
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 4.2e-29 134.0 267 34.1
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 3.6e-28 131.0 186 41.4
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.0e-27 127.9 172 41.9
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 3.0e-27 127.9 181 39.8
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.1e-27 127.1 157 43.3
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 2.8e-25 121.3 189 37.0
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 2.0e-23 115.2 96 59.4
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 2.7e-20 104.8 101 52.5
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 3.6e-20 104.4 95 49.5
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 1.1e-18 99.4 98 49.0
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 7.4e-18 96.7 76 59.2
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.7e-17 94.4 108 48.1
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 2.0e-10 72.0 102 39.2
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 3.1e-08 64.7 65 49.2
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 7.0e-08 63.5 56 50.0
Psat6g076200 Pisum sativum HOM05D006439 ORTHO05D008152 1.6e-07 62.4 47 55.3


User provided reference genes

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