Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01192 Aquilegia oxysepala HOM05D001732 ORTHO05D006715 1.2e-83 313.2 155 100.0
Aqoxy6G01904 Aquilegia oxysepala HOM05D001732 ORTHO05D006715 2.7e-56 222.2 180 71.7
TAR625G1178 Trochodendron aralioides HOM05D001732 ORTHO05D006715 4.2e-41 171.8 161 63.4
CDE08G0347 Ceratophyllum demersum HOM05D001732 ORTHO05D006715 4.6e-40 168.3 161 60.2
PSO210G2512 Papaver somniferum HOM05D001732 ORTHO05D006715 1.1e-38 163.7 162 59.3
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 2.5e-38 162.5 171 57.9
PSO170G3407 Papaver somniferum HOM05D001732 ORTHO05D006715 2.5e-38 162.5 162 58.6
Sabra02G0012000 Salix brachista HOM05D001732 ORTHO05D006715 7.3e-38 161.0 163 57.7
Eucgr.F03702 Eucalyptus grandis HOM05D001732 ORTHO05D006715 1.6e-37 159.8 165 55.8
Actinidia37958 Actinidia chinensis HOM05D001732 ORTHO05D006715 3.6e-37 158.7 164 53.7
Potri.002G015002 Populus trichocarpa HOM05D001732 ORTHO05D006715 6.2e-37 157.9 163 57.1
Thecc.08G053200 Theobroma cacao HOM05D001732 ORTHO05D006715 1.1e-36 157.1 162 56.2
Nitab4.5_0005243g0020 Nicotiana tabacum HOM05D001732 ORTHO05D006715 1.8e-36 156.4 175 54.9
Atru.chr13.201 Acer truncatum HOM05D001732 ORTHO05D006715 3.1e-36 155.6 172 50.6
Duzib116G0808 Durio zibethinus HOM05D001732 ORTHO05D006715 1.2e-35 153.7 162 54.9
RcHm_v2.0_Chr6g0303781 Rosa chinensis HOM05D001732 ORTHO05D006715 1.2e-35 153.7 171 52.6
CAN.G691.13 Capsicum annuum HOM05D001732 ORTHO05D006715 1.5e-35 153.3 181 50.3
CiPaw.04G051700 Carya illinoinensis HOM05D001732 ORTHO05D006715 1.5e-35 153.3 175 50.3
ECA233G1657 Erigeron canadensis HOM05D001732 ORTHO05D006715 1.5e-35 153.3 160 53.8
Gohir.A11G330000 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.0e-35 152.9 145 59.3
QL12p036301 Quercus lobata HOM05D001732 ORTHO05D006715 2.0e-35 152.9 158 55.7
Cfa007703 Carpinus fangiana HOM05D001732 ORTHO05D006715 2.6e-35 152.5 172 50.6
EL10Ac1g02055 Beta vulgaris HOM05D001732 ORTHO05D006715 3.4e-35 152.1 165 52.1
ClCG05G015370 Citrullus lanatus HOM05D001732 ORTHO05D006715 3.4e-35 152.1 160 55.0
CSS0027369 Camellia sinensis var. sinensis HOM05D001732 ORTHO05D006715 4.5e-35 151.8 164 54.9
Cpa.g.sc128.68 Carica papaya HOM05D001732 ORTHO05D006715 5.8e-35 151.4 163 54.0
COL.COLO4_26069 Corchorus olitorius HOM05D001732 ORTHO05D006715 7.6e-35 151.0 162 53.1
Manes.02G226700 Manihot esculenta HOM05D001732 ORTHO05D006715 7.6e-35 151.0 174 51.7
Nitab4.5_0000743g0150 Nicotiana tabacum HOM05D001732 ORTHO05D006715 9.9e-35 150.6 166 53.0
PGSC0003DMG402016244 Solanum tuberosum HOM05D001732 ORTHO05D006715 9.9e-35 150.6 181 49.2
GSVIVG01008724001 Vitis vinifera HOM05D001732 ORTHO05D006715 9.9e-35 150.6 169 52.7
Migut.N02762 Erythranthe guttata HOM05D001732 ORTHO05D006715 1.7e-34 149.8 161 53.4
Sed0004106 Sechium edule HOM05D001732 ORTHO05D006715 1.7e-34 149.8 153 56.2
CsaV3_4G036990 Cucumis sativus L. HOM05D001732 ORTHO05D006715 2.2e-34 149.4 160 55.0
MSTRG.2679 Avicennia marina HOM05D001732 ORTHO05D006715 2.9e-34 149.1 161 50.9
Solyc11g008730.2 Solanum lycopersicum HOM05D001732 ORTHO05D006715 2.9e-34 149.1 181 49.2
Sopen11g004510 Solanum pennellii HOM05D001732 ORTHO05D006715 2.9e-34 149.1 181 49.2
Gorai.007G379800 Gossypium raimondii HOM05D001732 ORTHO05D006715 4.9e-34 148.3 162 53.7
SGA_v2.0_scaffold145G36108 Striga asiatica HOM05D001732 ORTHO05D006715 6.4e-34 147.9 154 54.5
MD08G1006500 Malus domestica HOM05D001732 ORTHO05D006715 8.4e-34 147.5 162 52.5
Gohir.A11G200232 Gossypium hirsutum HOM05D001732 ORTHO05D006715 1.4e-33 146.7 162 53.1
PGR031G2961 Punica granatum HOM05D001732 ORTHO05D006715 1.4e-33 146.7 161 52.8
Gohir.1Z049315 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.4e-33 146.0 162 53.1
Gohir.D08G006900 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.4e-33 146.0 162 53.1
DCAR_016903 Daucus carota HOM05D001732 ORTHO05D006715 5.4e-33 144.8 160 52.5
Gohir.D02G000300 Gossypium hirsutum HOM05D001732 ORTHO05D006715 5.4e-33 144.8 162 52.5
Gorai.005G000800 Gossypium raimondii HOM05D001732 ORTHO05D006715 5.4e-33 144.8 162 52.5
Ciclev10002649m.g Citrus clementina HOM05D001732 ORTHO05D006715 7.1e-33 144.4 169 50.3
Gorai.006G274900 Gossypium raimondii HOM05D001732 ORTHO05D006715 9.3e-33 144.1 155 53.5
SGA_v2.0_scaffold236G43748 Striga asiatica HOM05D001732 ORTHO05D006715 9.3e-33 144.1 161 52.2
Gohir.D04G192600 Gossypium hirsutum HOM05D001732 ORTHO05D006715 1.6e-32 143.3 162 51.9
Gohir.A01G232000 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.1e-32 142.9 162 52.5
TWI12G0398 Tripterygium wilfordii HOM05D001732 ORTHO05D006715 2.1e-32 142.9 166 49.4
Zm00001eb067320 Zea mays HOM05D001732 ORTHO05D006715 3.5e-32 142.1 156 51.3
Gohir.D08G275600 Gossypium hirsutum HOM05D001732 ORTHO05D006715 6.0e-32 141.4 162 51.9
Cc10_g01020 Coffea canephora HOM05D001732 ORTHO05D006715 7.9e-32 141.0 161 50.9
CANSAT25G2855 Cannabis sativa HOM05D001732 ORTHO05D006715 1.3e-31 140.2 167 50.9
Gohir.A13G000800 Gossypium hirsutum HOM05D001732 ORTHO05D006715 1.3e-31 140.2 162 51.2
Lalb_Chr19g0139341 Lupinus albus HOM05D001732 ORTHO05D006715 1.3e-31 140.2 163 49.1
Glyma.11G102700 Glycine max HOM05D001732 ORTHO05D006715 1.8e-31 139.8 161 50.9
Glyma.11G102900 Glycine max HOM05D001732 ORTHO05D006715 1.8e-31 139.8 161 50.9
VMungo1215G0739 Vigna mungo HOM05D001732 ORTHO05D006715 1.8e-31 139.8 161 50.3
Gohir.1Z049638 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.3e-31 139.4 162 51.2
Gohir.1Z049365 Gossypium hirsutum HOM05D001732 ORTHO05D006715 3.9e-31 138.7 162 51.2
Gohir.A08G000020 Gossypium hirsutum HOM05D001732 ORTHO05D006715 3.9e-31 138.7 162 51.2
Phvul.002G058300 Phaseolus vulgaris HOM05D001732 ORTHO05D006715 3.9e-31 138.7 161 50.9
Os04g0663500 Oryza sativa ssp. japonica HOM05D001732 ORTHO05D006715 6.7e-31 137.9 153 51.6
Nn5g30866 Nelumbo nucifera HOM05D001732 ORTHO05D006715 1.9e-30 136.3 153 54.2
TWI77G0460 Tripterygium wilfordii HOM05D001732 ORTHO05D006715 2.5e-30 136.0 162 49.4
Gorai.004G294300 Gossypium raimondii HOM05D001732 ORTHO05D006715 4.3e-30 135.2 132 56.8
HPP92_015011 Vanilla planifolia HOM05D001732 ORTHO05D006715 5.6e-30 134.8 154 51.3
FAN27G1331 Fragaria x ananassa HOM05D001732 ORTHO05D006715 9.6e-30 134.0 154 50.6
Oeu017913.1 Olea europaea HOM05D001732 ORTHO05D006715 9.6e-30 134.0 146 50.7
arahy.Tifrunner.gnm1.ann1.60EZUA Arachis hypogaea HOM05D001732 ORTHO05D006715 1.3e-29 133.7 159 47.8
arahy.Tifrunner.gnm1.ann1.ND8TJ1 Arachis hypogaea HOM05D001732 ORTHO05D006715 1.3e-29 133.7 159 47.8
SalBow7G3452 Salvia bowleyana HOM05D001732 ORTHO05D006715 1.3e-29 133.7 173 47.4
Haze_14372 Corylus avellana HOM05D001732 ORTHO05D006715 2.1e-29 132.9 172 47.1
Lj3g0013314 Lotus japonicus HOM05D001732 ORTHO05D006715 1.1e-28 130.6 154 50.6
Aa31LG5G18420 Aethionema arabicum HOM05D001732 ORTHO05D006715 1.8e-28 129.8 172 45.9
unitig_0.g2094 Utricularia gibba HOM05D000560 ORTHO05D000417 2.4e-28 129.4 162 46.9
MBI08_g41940_MAGBIO Magnolia biondii HOM05D001732 ORTHO05D006715 3.1e-28 129.0 275 34.9
Medtr4g074450 Medicago truncatula HOM05D001732 ORTHO05D006715 6.9e-28 127.9 164 46.3
Ca_03030_v3 Cicer arietinum L. HOM05D001732 ORTHO05D006715 9.0e-28 127.5 155 49.0
TPR.G32336 Trifolium pratense HOM05D001732 ORTHO05D006715 1.2e-27 127.1 147 49.7
THA.LOC104809864 Tarenaya hassleriana HOM05D001732 ORTHO05D006715 2.0e-27 126.3 164 48.2
FAN15G0072 Fragaria x ananassa HOM05D001732 ORTHO05D006715 4.5e-27 125.2 190 40.5
BcaB03g14676 Brassica carinata HOM05D001732 ORTHO05D006715 2.2e-26 122.9 172 44.8
AT3G07860 Arabidopsis thaliana HOM05D001732 ORTHO05D006715 4.9e-26 121.7 169 46.7
Carub.0003s0744 Capsella rubella HOM05D001732 ORTHO05D006715 6.5e-26 121.3 173 45.1
Medtr4g108000 Medicago truncatula HOM05D003598 ORTHO05D004198 6.5e-26 121.3 170 44.7
BraA03t12726Z Brassica rapa HOM05D001732 ORTHO05D006715 8.4e-26 120.9 172 44.2
AL3G19230 Arabidopsis lyrata HOM05D001732 ORTHO05D006715 1.4e-25 120.2 169 46.2
BcaB03g14675 Brassica carinata HOM05D001732 ORTHO05D006715 1.4e-25 120.2 172 43.6
A03p35490 Brassica napus HOM05D001732 ORTHO05D006715 1.4e-25 120.2 172 44.2
C03p43150 Brassica napus HOM05D001732 ORTHO05D006715 1.4e-25 120.2 172 43.6
BolC3t16584H Brassica oleracea HOM05D001732 ORTHO05D006715 1.4e-25 120.2 172 43.6
Thhalv10021648m.g Eutrema salsugineum HOM05D001732 ORTHO05D006715 1.9e-25 119.8 156 46.8
Gohir.D11G222700 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.5e-25 119.4 155 48.4
Sp3g06780 Schrenkiella parvula HOM05D001732 ORTHO05D006715 7.1e-25 117.9 163 45.4
CARHR082580 Cardamine hirsuta HOM05D001732 ORTHO05D006715 2.1e-24 116.3 177 42.4
ATR0661G291 Amborella trichopoda HOM05D001732 ORTHO05D006715 6.0e-24 114.8 177 44.6
Peaxi162Scf00254g00422 Petunia axillaris HOM05D001732 ORTHO05D006715 6.0e-24 114.8 162 45.1
CSS0031494 Camellia sinensis var. sinensis HOM05D001732 ORTHO05D006715 1.0e-23 114.0 131 52.7
Dinv24804 Davidia involucrata HOM05D001732 ORTHO05D006715 1.0e-23 114.0 133 51.9
Gorai.007G240300 Gossypium raimondii HOM05D001732 ORTHO05D006715 2.3e-23 112.8 134 51.5
Mapoly0095s0017 Marchantia polymorpha HOM05D001732 ORTHO05D006715 3.9e-23 112.1 163 42.3
Prupe.1G358400 Prunus persica HOM05D001732 ORTHO05D006715 6.7e-23 111.3 140 50.0
Rhsim07G0251800 Rhododendron simsii HOM05D001732 ORTHO05D006715 8.7e-23 110.9 131 49.6
vmacro04384 Vaccinium macrocarpon HOM05D001732 ORTHO05D006715 1.5e-22 110.2 132 50.0
SHI43126 Sapria himalayana HOM05D001732 ORTHO05D006715 1.9e-22 109.8 209 36.8
Gorai.009G456200 Gossypium raimondii HOM05D001732 ORTHO05D006715 4.8e-21 105.1 133 48.9
AUR62036745 Chenopodium quinoa HOM05D001732 ORTHO05D006715 1.4e-20 103.6 124 50.0
AUR62013855 Chenopodium quinoa HOM05D001732 ORTHO05D006715 1.8e-20 103.2 124 50.0
Sc02g0008940 Simmondsia chinensis HOM05D001732 ORTHO05D006715 1.2e-19 100.5 65 67.7
Pp3c18_13370 Physcomitrium patens HOM05D001732 ORTHO05D006715 1.5e-19 100.1 155 40.6
HanXRQChr12g0366641 Helianthus annuus HOM05D001732 ORTHO05D006715 2.6e-19 99.4 63 68.3
BcaC04g20480 Brassica carinata HOM05D001732 ORTHO05D006715 5.8e-19 98.2 149 43.6
AagrBONN_evm.TU.Sc2ySwM_340.241 Anthoceros agrestis HOM05D001732 ORTHO05D006715 7.6e-19 97.8 153 38.6
Glyma.12G028033 Glycine max HOM05D001732 ORTHO05D006715 3.9e-15 85.5 64 59.4
C09p43050 Brassica napus HOM05D014803 ORTHO05D017502 5.7e-14 81.6 131 43.5
BolC9t57175H Brassica oleracea HOM05D014803 ORTHO05D017502 5.7e-14 81.6 131 43.5
Pp3c19_2430 Physcomitrium patens HOM05D001732 ORTHO05D006715 8.2e-13 77.8 166 34.3
BcaC03g15897 Brassica carinata HOM05D001732 ORTHO05D006715 1.8e-12 76.6 143 39.2
Nn3g18505 Nelumbo nucifera HOM05D001732 ORTHO05D006715 2.4e-12 76.3 58 70.7
CBR_g49713 Chara braunii HOM05D006523 ORTHO05D008212 1.2e-11 73.9 152 34.2
Manes.02G226801 Manihot esculenta HOM05D001732 ORTHO05D006715 5.9e-11 71.6 70 58.6
Pp3c21_7260 Physcomitrium patens HOM05D001732 ORTHO05D006715 5.9e-11 71.6 155 33.5
AagrBONN_evm.TU.Sc2ySwM_117.2831 Anthoceros agrestis HOM05D001732 ORTHO05D006715 7.7e-11 71.2 124 34.7
MBI08_g43115_MAGBIO Magnolia biondii HOM05D001732 ORTHO05D006715 7.7e-11 71.2 66 54.5
CBR_g48797 Chara braunii HOM05D001732 ORTHO05D006715 1.3e-10 70.5 152 32.2
BcaC07g41028 Brassica carinata HOM05D001732 ORTHO05D006715 3.8e-10 68.9 125 40.0
Lsat_1_v5_gn_8_28861 Lactuca sativa HOM05D001732 ORTHO05D006715 3.8e-10 68.9 49 71.4
MBI08_g46842_MAGBIO Magnolia biondii HOM05D001732 ORTHO05D006715 6.5e-10 68.2 58 56.9
Gohir.A07G233500 Gossypium hirsutum HOM05D001732 ORTHO05D006715 1.1e-09 67.4 35 77.1
BcaC06g35903 Brassica carinata HOM05D001732 ORTHO05D006715 1.9e-09 66.6 138 37.7
Actinidia29773 Actinidia chinensis HOM05D001732 ORTHO05D006715 2.5e-09 66.2 58 62.1
FAN20G1153 Fragaria x ananassa HOM05D001732 ORTHO05D006715 2.7e-08 62.8 43 69.8
Glyma.12G027967 Glycine max HOM05D001732 ORTHO05D006715 7.9e-08 61.2 49 63.3
HanXRQChr08g0215241 Helianthus annuus HOM05D001732 ORTHO05D006715 5.1e-07 58.5 93 40.9
C02p36660 Brassica napus HOM05D001732 ORTHO05D006715 8.8e-07 57.8 62 51.6
BcaB06g26153 Brassica carinata HOM05D001732 ORTHO05D006715 4.3e-06 55.5 62 51.6


User provided reference genes

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