Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 5.9e-283 976.9 492 100.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 4.5e-158 562.0 492 58.9
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.0e-157 560.8 497 58.8
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.1e-155 553.1 489 58.7
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 3.7e-152 542.3 424 62.3
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 7.0e-151 538.1 467 58.0
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 2.7e-150 536.2 440 59.5
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 3.5e-150 535.8 440 60.5
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.9e-148 530.0 490 55.7
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 3.3e-148 529.3 471 56.3
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.2e-147 527.3 483 57.6
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.6e-147 526.9 481 57.6
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 2.8e-147 526.2 427 60.9
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 2.8e-147 526.2 496 54.6
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.3e-146 523.1 443 59.8
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 1.2e-145 520.8 489 55.6
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.5e-145 520.4 496 54.2
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 2.0e-145 520.0 421 60.6
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 4.4e-145 518.8 427 60.7
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 2.9e-144 516.2 483 56.7
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 6.4e-144 515.0 491 54.8
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 8.3e-144 514.6 431 58.0
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.1e-143 514.2 431 59.2
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.9e-143 513.5 482 57.3
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 3.2e-143 512.7 484 55.0
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 3.2e-143 512.7 426 59.2
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 5.4e-143 511.9 483 55.5
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 5.4e-143 511.9 425 60.0
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 2.0e-142 510.0 414 61.6
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 3.0e-141 506.1 477 55.3
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 5.0e-141 505.4 494 53.6
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 6.6e-141 505.0 450 57.6
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 3.3e-140 502.7 480 54.2
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.6e-140 501.9 474 54.2
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.6e-139 500.4 426 58.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.1e-139 500.0 487 53.2
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 4.7e-139 498.8 422 59.2
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 4.7e-139 498.8 494 52.4
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 6.2e-139 498.4 463 54.0
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 6.2e-139 498.4 421 57.5
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 8.0e-139 498.0 426 58.7
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 8.0e-139 498.0 426 58.2
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.1e-138 497.7 464 53.2
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.1e-138 497.7 509 52.1
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.8e-138 496.9 427 57.8
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 1.8e-138 496.9 455 56.9
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.8e-138 496.9 492 53.5
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.3e-138 496.5 465 52.9
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.0e-138 495.7 423 57.7
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 6.8e-138 495.0 457 56.0
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.5e-137 493.8 422 58.5
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 2.0e-137 493.4 422 58.1
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 3.4e-137 492.7 418 58.6
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 4.4e-137 492.3 422 58.3
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.9e-136 489.6 552 49.6
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 3.7e-136 489.2 452 56.6
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 8.3e-136 488.0 416 54.3
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.4e-135 487.3 446 54.7
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 3.2e-135 486.1 442 54.5
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 5.4e-135 485.3 427 57.1
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 7.0e-135 485.0 426 56.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.6e-134 483.8 436 56.2
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.6e-134 483.8 427 57.6
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.7e-134 483.0 489 53.0
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.7e-134 483.0 417 58.3
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 3.5e-134 482.6 457 56.0
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 3.5e-134 482.6 472 51.3
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 6.0e-134 481.9 421 57.2
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.3e-133 480.7 483 53.0
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.6e-132 475.3 479 48.2
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 9.5e-132 474.6 425 55.3
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.6e-131 473.8 418 53.8
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.6e-131 473.8 398 59.0
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 3.6e-131 472.6 373 61.1
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.1e-130 471.1 428 56.3
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.8e-130 470.3 406 57.1
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 5.2e-130 468.8 369 61.2
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.2e-128 463.4 423 54.1
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.4e-127 459.9 411 56.4
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 9.2e-127 458.0 393 58.0
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 2.7e-126 456.4 367 62.4
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 6.0e-126 455.3 393 56.7
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 6.6e-125 451.8 476 51.1
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 8.6e-125 451.4 390 57.7
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 2.5e-124 449.9 442 53.4
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 4.3e-124 449.1 453 52.3
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 7.3e-124 448.4 410 54.6
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 3.4e-121 439.5 515 46.8
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.2e-118 431.0 415 50.1
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 3.0e-117 426.4 365 55.1
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 8.7e-117 424.9 492 49.0
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.5e-116 424.1 443 53.5
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 5.8e-113 412.1 389 56.6
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 2.7e-110 403.3 361 52.6
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.0e-105 387.1 465 44.3
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 2.4e-98 363.6 423 44.4
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.2e-97 361.3 424 46.0
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.6e-97 360.1 426 43.9
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 8.4e-96 355.1 416 45.2
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 8.2e-91 338.6 422 43.6
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 3.8e-88 329.7 280 59.3
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 3.2e-87 326.6 396 42.2
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 6.9e-82 308.9 366 45.6
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.7e-80 304.3 297 50.5
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 9.4e-71 271.9 270 54.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.6e-68 263.8 222 55.9
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 3.8e-64 250.0 253 53.4
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 2.6e-60 237.3 282 49.6
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.4e-50 204.9 220 47.3
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 8.8e-45 185.7 449 30.7
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.2e-41 175.3 454 31.1
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 5.4e-34 149.8 163 52.1
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 4.3e-31 140.2 156 55.8
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 9.5e-31 139.0 113 58.4
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 4.0e-29 133.7 116 56.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 9.8e-28 129.0 396 28.3
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.3e-27 128.6 95 64.2
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 7.8e-25 119.4 112 52.7
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.6e-22 110.5 96 56.2
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 2.6e-20 104.4 122 51.6
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.8e-20 103.2 90 52.2
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 3.1e-13 80.9 69 58.0
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 6.4e-11 73.2 74 59.5
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.7e-09 67.8 51 58.8
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.0e-08 65.9 69 47.8


User provided reference genes

Program Settings