Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.5e-273 945.7 504 100.0
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.1e-119 434.5 518 49.8
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 9.5e-103 378.3 546 45.1
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 1.2e-97 361.3 558 42.1
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 3.6e-94 349.7 615 40.7
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 2.6e-92 343.6 553 43.2
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 2.9e-91 340.1 651 37.9
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.4e-90 337.8 659 39.0
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 1.9e-90 337.4 664 39.0
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 3.2e-90 336.7 646 39.3
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.5e-89 333.2 537 40.8
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 1.0e-88 331.6 650 36.3
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 2.3e-88 330.5 640 37.8
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 4.7e-86 322.8 644 36.0
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 6.2e-86 322.4 655 36.3
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 1.3e-83 314.7 692 34.0
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.7e-83 314.3 650 34.6
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 2.9e-83 313.5 706 34.3
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 3.8e-83 313.2 695 32.9
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 8.4e-83 312.0 694 32.9
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.1e-82 311.6 704 34.8
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 9.3e-82 308.5 651 36.3
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 1.2e-81 308.1 613 38.0
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 2.7e-81 307.0 710 33.9
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 4.6e-81 306.2 320 53.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 1.0e-80 305.1 621 36.7
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.3e-80 304.7 649 35.3
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 2.3e-80 303.9 566 38.5
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 6.6e-80 302.4 647 35.1
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 8.7e-80 302.0 705 32.5
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 1.5e-79 301.2 647 34.9
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 3.3e-79 300.1 612 36.8
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 3.3e-79 300.1 701 32.7
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 7.3e-79 298.9 616 35.6
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 1.6e-78 297.7 663 34.7
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 1.1e-77 295.0 638 35.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 3.1e-77 293.5 697 33.1
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 5.3e-77 292.7 586 35.8
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.2e-76 291.6 626 34.0
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 1.5e-76 291.2 622 35.9
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 2.0e-76 290.8 608 36.3
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 2.0e-76 290.8 647 33.7
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 4.5e-76 289.7 313 52.7
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 5.8e-76 289.3 419 44.9
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 5.8e-76 289.3 587 36.8
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 7.6e-76 288.9 624 34.3
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.6e-76 288.9 608 36.2
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 2.2e-75 287.3 606 36.0
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 2.9e-75 287.0 500 39.2
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 6.4e-75 285.8 705 34.2
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 6.4e-75 285.8 609 36.0
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.4e-74 284.6 623 36.6
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.4e-74 284.6 702 33.5
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 7.9e-73 278.9 627 33.7
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 8.7e-72 275.4 607 35.4
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 8.7e-72 275.4 624 34.8
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.5e-71 274.6 711 32.5
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 2.5e-71 273.9 616 35.1
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 7.4e-71 272.3 605 35.5
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 7.4e-71 272.3 540 37.2
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 9.6e-71 271.9 595 36.5
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.1e-70 270.8 631 34.9
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 8.1e-70 268.9 238 59.2
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 5.3e-69 266.2 350 46.3
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 6.9e-69 265.8 613 35.4
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 6.9e-69 265.8 646 33.9
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 3.4e-68 263.5 692 32.2
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 9.9e-68 261.9 487 39.8
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 2.9e-67 260.4 682 32.0
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 2.4e-66 257.3 580 35.7
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.2e-66 256.9 389 42.4
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 3.2e-66 256.9 718 31.5
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 4.2e-66 256.5 536 36.8
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.5e-66 256.1 665 32.5
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.2e-65 255.0 657 32.1
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-65 254.6 551 35.8
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 2.1e-65 254.2 575 33.6
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 2.7e-65 253.8 616 34.3
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 2.7e-65 253.8 542 35.2
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 3.0e-64 250.4 585 34.4
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 3.9e-64 250.0 623 33.2
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 6.7e-64 249.2 585 34.2
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.9e-63 247.7 587 34.4
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.9e-63 247.7 587 34.4
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.9e-63 247.7 587 34.4
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 5.6e-63 246.1 515 36.5
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 4.8e-62 243.0 551 34.1
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.4e-61 241.5 526 34.8
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 1.8e-61 241.1 523 35.6
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 1.8e-61 241.1 712 31.6
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 1.5e-60 238.0 289 48.1
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.6e-60 237.3 530 35.3
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 2.6e-60 237.3 523 37.1
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 7.9e-57 225.7 550 33.3
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.3e-56 224.9 197 57.4
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 7.4e-55 219.2 509 34.6
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 4.1e-53 213.4 518 33.4
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 4.1e-53 213.4 518 34.9
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 9.0e-53 212.2 497 34.0
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 2.6e-52 210.7 213 52.6
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.5e-50 204.1 583 31.2
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 6.1e-49 199.5 611 32.1
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.1e-45 188.7 554 31.8
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 2.5e-42 177.6 128 65.6
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 9.4e-42 175.6 192 52.6
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.2e-38 164.5 133 59.4
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 4.2e-34 150.2 459 32.5
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 9.1e-29 132.5 273 38.1
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.6e-28 131.0 643 25.3
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 1.0e-24 119.0 251 39.0
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 7.5e-23 112.8 245 29.8
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 1.1e-21 109.0 148 43.9
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 9.1e-21 105.9 438 26.7
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 7.7e-20 102.8 503 25.0
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 1.3e-19 102.1 305 30.2
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 2.5e-18 97.8 350 30.3
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.5e-18 97.8 249 35.7
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 2.7e-12 77.8 595 24.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 5.5e-10 70.1 136 36.8
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 2.8e-09 67.8 86 38.4
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 3.6e-09 67.4 237 31.2
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 3.0e-08 64.3 194 32.5
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 6.8e-08 63.2 183 34.4


User provided reference genes

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