Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 0.0e+00 1298.9 648 100.0
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 8.9e-295 1016.5 625 81.3
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 2.4e-292 1008.4 663 76.9
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 1.2e-291 1006.1 667 77.5
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 3.3e-289 998.0 649 77.2
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 5.6e-289 997.3 576 83.5
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 7.3e-289 996.9 665 75.5
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 1.2e-288 996.1 665 75.3
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 3.6e-288 994.6 571 83.9
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 4.7e-288 994.2 657 76.7
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 1.0e-287 993.0 571 84.9
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 1.8e-287 992.3 583 82.8
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 5.2e-287 990.7 582 82.6
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 5.2e-287 990.7 626 78.3
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 7.5e-286 986.9 587 81.4
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 7.5e-286 986.9 587 81.9
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 9.8e-286 986.5 629 78.1
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 9.8e-286 986.5 587 81.4
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.7e-285 985.7 578 82.9
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 2.9e-285 984.9 660 75.8
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 3.7e-285 984.6 614 78.0
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 4.9e-285 984.2 592 81.2
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 1.1e-284 983.0 570 83.0
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 1.4e-284 982.6 659 75.7
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 1.4e-284 982.6 584 82.5
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 2.4e-284 981.9 577 82.3
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 3.2e-284 981.5 583 82.3
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 4.1e-284 981.1 639 77.3
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 7.0e-284 980.3 590 80.0
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 9.2e-284 979.9 659 75.6
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 1.6e-283 979.2 588 81.5
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 3.5e-283 978.0 544 86.6
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 5.0e-282 974.2 679 73.9
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 1.1e-281 973.0 615 78.0
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 3.3e-281 971.5 659 75.3
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 9.5e-281 969.9 547 85.0
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 1.2e-280 969.5 606 78.2
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 1.6e-280 969.1 679 72.8
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 3.6e-280 968.0 617 77.5
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.4e-279 966.1 654 74.0
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 1.4e-279 966.1 645 75.2
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 1.4e-279 966.1 593 79.3
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.3e-279 965.3 570 81.8
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.3e-279 965.3 570 81.8
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 2.3e-279 965.3 580 80.9
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 3.1e-279 964.9 570 81.1
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 4.0e-279 964.5 577 80.1
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.8e-279 963.8 580 81.0
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 8.9e-279 963.4 671 73.8
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.2e-278 963.0 644 74.5
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 1.2e-278 963.0 575 81.7
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.2e-278 963.0 577 79.7
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 1.5e-278 962.6 570 81.2
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.5e-278 962.6 564 81.9
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 1.5e-278 962.6 571 80.2
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 2.0e-278 962.2 631 75.8
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 2.6e-278 961.8 625 75.5
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 4.4e-278 961.1 634 75.2
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 7.5e-278 960.3 593 78.2
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 1.3e-277 959.5 617 76.5
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 1.3e-277 959.5 571 80.6
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 2.2e-277 958.7 639 75.7
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 2.9e-277 958.4 626 75.9
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 2.9e-277 958.4 580 80.5
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 2.9e-277 958.4 649 73.8
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 4.9e-277 957.6 580 79.5
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 6.4e-277 957.2 627 74.6
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 6.4e-277 957.2 657 73.8
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 1.1e-276 956.4 617 76.0
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 3.2e-276 954.9 582 80.4
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 5.4e-276 954.1 622 75.9
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 1.2e-275 953.0 581 79.0
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 2.1e-275 952.2 582 79.7
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 6.0e-275 950.7 556 80.8
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 6.0e-275 950.7 528 86.4
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 7.8e-275 950.3 570 79.1
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 1.0e-274 949.9 570 79.1
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 1.3e-274 949.5 570 78.6
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 3.0e-274 948.3 593 77.1
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 3.9e-274 948.0 635 73.9
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 1.5e-273 946.0 570 79.3
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 5.6e-273 944.1 560 80.4
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 7.3e-273 943.7 623 73.8
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 9.5e-273 943.3 630 73.5
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 1.6e-272 942.6 544 81.6
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 1.6e-272 942.6 576 79.3
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 2.1e-272 942.2 572 78.7
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 3.6e-272 941.4 628 73.4
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 2.3e-271 938.7 571 77.9
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 3.4e-270 934.9 571 78.3
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 4.4e-270 934.5 571 78.3
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 5.8e-270 934.1 544 81.4
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 7.6e-270 933.7 625 76.5
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 1.3e-269 932.9 639 73.1
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 2.2e-269 932.2 576 78.1
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 6.4e-269 930.6 571 77.9
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.1e-268 929.9 604 76.3
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 2.4e-268 928.7 571 77.9
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 7.1e-268 927.2 639 73.4
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 3.5e-267 924.9 746 66.1
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 1.3e-266 922.9 547 80.3
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 1.3e-266 922.9 532 82.3
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 4.0e-263 911.4 545 79.4
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 1.9e-260 902.5 533 81.1
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 7.1e-260 900.6 564 77.7
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 8.7e-258 893.6 568 76.2
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 1.9e-257 892.5 570 76.3
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 7.3e-257 890.6 624 71.5
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 1.3e-256 889.8 573 75.4
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 6.7e-250 867.5 620 68.5
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 4.8e-248 861.3 570 75.6
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 3.8e-245 851.7 572 72.6
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 1.6e-243 846.3 576 73.8
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 6.2e-240 834.3 531 78.0
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 6.0e-235 817.8 448 88.2
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 5.7e-233 811.2 548 69.3
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 1.6e-232 809.7 560 73.4
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 4.8e-232 808.1 581 65.7
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 1.1e-231 807.0 448 85.5
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 4.5e-230 801.6 600 68.7
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 1.3e-224 783.5 550 68.2
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 8.5e-221 770.8 439 83.8
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 3.3e-209 732.3 517 69.4
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.0e-198 696.4 576 67.7
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 1.7e-192 676.8 449 72.4
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 5.2e-186 655.2 538 59.9
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 9.8e-177 624.4 361 81.7
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 3.3e-164 582.8 572 58.0
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 3.1e-162 576.2 344 80.8
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 3.0e-149 533.1 383 72.1
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 1.6e-147 527.3 562 50.7
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 9.0e-146 521.5 551 55.0
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 3.8e-144 516.2 417 65.7
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 4.3e-140 502.7 278 87.1
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 9.0e-138 495.0 280 82.5
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 1.5e-129 467.6 291 78.7
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 8.2e-115 418.7 577 43.8
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 1.2e-105 388.3 288 63.9
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 1.4e-95 354.8 644 36.8
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 2.2e-88 330.9 184 84.8
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 1.9e-87 327.8 263 66.2
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.2e-84 318.5 179 87.2
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 3.1e-82 310.5 591 36.5
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 1.0e-80 305.4 188 74.5
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 2.5e-79 300.8 179 81.0
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 6.1e-78 296.2 497 37.0
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 8.8e-77 292.4 167 84.4
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 1.1e-74 285.4 585 34.4
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 4.0e-69 266.9 321 49.8
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.7e-67 261.5 140 89.3
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 2.7e-65 254.2 610 32.5
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 2.2e-59 234.6 159 67.3
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 3.2e-58 230.7 594 30.5
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.7e-51 208.4 117 84.6
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 1.3e-48 198.7 120 81.7
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 5.8e-44 183.3 100 86.0
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 4.1e-42 177.2 107 78.5
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.0e-40 172.6 119 76.5
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 5.6e-39 166.8 155 55.5
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 5.1e-32 143.7 106 73.6
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 2.4e-29 134.8 67 89.6
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 2.4e-29 134.8 77 77.9
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 9.9e-28 129.4 65 92.3
Lsat_1_v5_gn_4_11801 Lactuca sativa HOM05D004119 ORTHO05D004797 6.4e-27 126.7 139 49.6
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 4.2e-26 124.0 94 69.1
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 2.0e-20 105.1 63 76.2
TAR633G0263 Trochodendron aralioides HOM05D004119 ORTHO05D004797 6.9e-13 80.1 54 74.1
TPR.G25082 Trifolium pratense HOM05D004119 ORTHO05D004797 6.4e-11 73.6 119 40.3
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 3.5e-09 67.8 38 76.3
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 2.3e-08 65.1 59 61.0
BraA01t00507Z Brassica rapa HOM05D004119 ORTHO05D004797 1.3e-06 59.3 54 55.6
Actinidia39373 Actinidia chinensis HOM05D004119 ORTHO05D004797 8.2e-06 56.6 55 54.5


User provided reference genes

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