Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G04259 Aquilegia oxysepala HOM05D005493 ORTHO05D007154 9.5e-152 540.4 329 100.0
TAR626G1878 Trochodendron aralioides HOM05D005493 ORTHO05D007154 2.9e-108 396.0 324 64.5
PSO339G5884 Papaver somniferum HOM05D005493 ORTHO05D007154 5.3e-102 375.2 296 68.9
Manes.13G088900 Manihot esculenta HOM05D005493 ORTHO05D007154 8.4e-100 367.9 328 62.2
TWI38G1153 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 1.1e-99 367.5 323 64.4
CiPaw.10G081900 Carya illinoinensis HOM05D005493 ORTHO05D007154 1.9e-99 366.7 322 64.0
Duzib192G0504 Durio zibethinus HOM05D005493 ORTHO05D007154 9.3e-99 364.4 321 60.1
Gorai.009G184000 Gossypium raimondii HOM05D005493 ORTHO05D007154 9.3e-99 364.4 319 61.8
Gohir.D05G178600 Gossypium hirsutum HOM05D005493 ORTHO05D007154 1.6e-98 363.6 320 61.9
ClCG01G010900 Citrullus lanatus HOM05D005493 ORTHO05D007154 4.6e-98 362.1 280 68.6
Thecc.06G236400 Theobroma cacao HOM05D005493 ORTHO05D007154 6.0e-98 361.7 323 60.4
Sed0001140 Sechium edule HOM05D005493 ORTHO05D007154 1.0e-97 360.9 294 69.4
Duzib160G0837 Durio zibethinus HOM05D005493 ORTHO05D007154 1.1e-96 357.5 328 60.7
CAN.G1156.21 Capsicum annuum HOM05D005493 ORTHO05D007154 1.9e-96 356.7 312 59.6
DCAR_006316 Daucus carota HOM05D005493 ORTHO05D007154 2.8e-95 352.8 292 62.7
TWI63G0139 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 3.7e-95 352.4 324 59.0
CSS0047473 Camellia sinensis var. sinensis HOM05D005493 ORTHO05D007154 4.8e-95 352.1 319 63.0
Lsat_1_v5_gn_4_63901 Lactuca sativa HOM05D005493 ORTHO05D007154 1.4e-94 350.5 323 59.1
Potri.016G005500 Populus trichocarpa HOM05D005493 ORTHO05D007154 1.8e-94 350.1 291 67.4
Potri.006G004900 Populus trichocarpa HOM05D005493 ORTHO05D007154 2.4e-94 349.7 324 65.7
Gohir.A05G175500 Gossypium hirsutum HOM05D005493 ORTHO05D007154 9.0e-94 347.8 299 62.2
Phvul.006G138500 Phaseolus vulgaris HOM05D005493 ORTHO05D007154 1.2e-93 347.4 324 59.6
Glyma.09G014500 Glycine max HOM05D005493 ORTHO05D007154 2.6e-93 346.3 283 66.4
Hma1.2p1_1175F.1_g264030 Hydrangea macrophylla HOM05D005493 ORTHO05D007154 5.8e-93 345.1 288 62.8
THA.LOC104806738 Tarenaya hassleriana HOM05D005493 ORTHO05D007154 5.8e-93 345.1 295 65.1
VMungo0540G1721 Vigna mungo HOM05D005493 ORTHO05D007154 7.6e-93 344.7 271 66.4
Cpa.g.sc27.228 Carica papaya HOM05D005493 ORTHO05D007154 1.3e-92 344.0 282 63.1
PGR042G0366 Punica granatum HOM05D005493 ORTHO05D007154 1.3e-92 344.0 311 65.0
CDE05G0023 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 2.9e-92 342.8 304 59.2
HanXRQChr16g0515751 Helianthus annuus HOM05D005493 ORTHO05D007154 4.9e-92 342.0 310 59.0
MELO3C026067.2 Cucumis melo HOM05D005493 ORTHO05D007154 6.4e-92 341.7 280 63.6
SalBow8G5358 Salvia bowleyana HOM05D005493 ORTHO05D007154 1.1e-91 340.9 317 57.1
Ah.11g043160 Amaranthus hybridus HOM05D005493 ORTHO05D007154 1.4e-91 340.5 294 64.6
COL.COLO4_31918 Corchorus olitorius HOM05D005493 ORTHO05D007154 1.4e-91 340.5 239 74.9
PGSC0003DMG400013365 Solanum tuberosum HOM05D005493 ORTHO05D007154 1.9e-91 340.1 290 63.1
CsaV3_1G015560 Cucumis sativus L. HOM05D005493 ORTHO05D007154 2.4e-91 339.7 323 57.3
Dinv02850 Davidia involucrata HOM05D005493 ORTHO05D007154 4.2e-91 339.0 269 63.9
Glyma.15G120100 Glycine max HOM05D005493 ORTHO05D007154 7.1e-91 338.2 320 59.1
Cc09_g00320 Coffea canephora HOM05D005493 ORTHO05D007154 1.2e-90 337.4 309 57.3
Lj1A1246T23 Lonicera japonica HOM05D005493 ORTHO05D007154 6.0e-90 335.1 267 68.9
EL10Ac8g19414 Beta vulgaris HOM05D005493 ORTHO05D007154 1.0e-89 334.3 310 61.3
Lalb_Chr18g0057311 Lupinus albus HOM05D005493 ORTHO05D007154 1.0e-89 334.3 290 66.2
Rhsim13G0140700 Rhododendron simsii HOM05D005493 ORTHO05D007154 2.3e-89 333.2 303 60.7
SGA_v2.0_scaffold7G03695 Striga asiatica HOM05D005493 ORTHO05D007154 2.3e-89 333.2 298 61.4
Actinidia39254 Actinidia chinensis HOM05D005493 ORTHO05D007154 5.1e-89 332.0 333 54.4
Hund29945 Selenicereus undatus HOM05D005493 ORTHO05D007154 8.7e-89 331.3 288 63.9
Lj6g0009296 Lotus japonicus HOM05D005493 ORTHO05D007154 5.6e-88 328.6 299 61.9
Psat1g172480 Pisum sativum HOM05D005493 ORTHO05D007154 7.4e-88 328.2 291 63.2
TPR.G17550 Trifolium pratense HOM05D005493 ORTHO05D007154 9.6e-88 327.8 287 62.0
AUR62033011 Chenopodium quinoa HOM05D005493 ORTHO05D007154 2.8e-87 326.2 279 64.2
Atru.chr1.2258 Acer truncatum HOM05D005493 ORTHO05D007154 6.2e-87 325.1 268 64.9
Nn1g07522 Nelumbo nucifera HOM05D005493 ORTHO05D007154 8.2e-87 324.7 271 63.8
Nitab4.5_0001296g0130 Nicotiana tabacum HOM05D005493 ORTHO05D007154 8.2e-87 324.7 275 65.5
Haze_07019 Corylus avellana HOM05D005493 ORTHO05D007154 1.4e-86 323.9 221 72.4
Medtr2g027010 Medicago truncatula HOM05D005493 ORTHO05D007154 3.1e-86 322.8 289 60.6
Cfa000035 Carpinus fangiana HOM05D005493 ORTHO05D007154 5.3e-86 322.0 222 71.6
Eucgr.E03858 Eucalyptus grandis HOM05D005493 ORTHO05D007154 1.5e-85 320.5 301 58.1
CANSAT56G4202 Cannabis sativa HOM05D005493 ORTHO05D007154 2.0e-85 320.1 295 66.8
ECA232G3574 Erigeron canadensis HOM05D005493 ORTHO05D007154 5.8e-85 318.5 318 61.3
QL05p067786 Quercus lobata HOM05D005493 ORTHO05D007154 1.0e-84 317.8 342 58.2
FAN28G0158 Fragaria x ananassa HOM05D005493 ORTHO05D007154 2.9e-84 316.2 291 64.3
MSTRG.16053 Avicennia marina HOM05D005493 ORTHO05D007154 1.1e-83 314.3 292 57.2
BcaB07g30764 Brassica carinata HOM05D005493 ORTHO05D007154 1.4e-83 313.9 334 60.5
MBI14_g10146_MAGBIO Magnolia biondii HOM05D005493 ORTHO05D007154 2.5e-83 313.2 290 66.6
Solyc11g012760.2 Solanum lycopersicum HOM05D005493 ORTHO05D007154 9.3e-83 311.2 189 78.3
Sopen11g007500 Solanum pennellii HOM05D005493 ORTHO05D007154 9.3e-83 311.2 224 68.3
Carub.0008s0010 Capsella rubella HOM05D005493 ORTHO05D007154 1.6e-82 310.5 294 65.6
Peaxi162Scf00827g00517 Petunia axillaris HOM05D005493 ORTHO05D007154 1.6e-82 310.5 219 68.5
Zm00001eb253250 Zea mays HOM05D005493 ORTHO05D007154 2.1e-82 310.1 271 63.5
arahy.Tifrunner.gnm1.ann1.N8508C Arachis hypogaea HOM05D005493 ORTHO05D007154 2.7e-82 309.7 317 58.4
Aa31sc219G70 Aethionema arabicum HOM05D005493 ORTHO05D007154 6.0e-82 308.5 326 56.1
Ciclev10015889m.g Citrus clementina HOM05D005493 ORTHO05D007154 6.0e-82 308.5 308 59.7
Sp2g12390 Schrenkiella parvula HOM05D005493 ORTHO05D007154 6.0e-82 308.5 334 59.9
Migut.M01444 Erythranthe guttata HOM05D005493 ORTHO05D007154 7.9e-82 308.1 190 76.3
arahy.Tifrunner.gnm1.ann1.2D6L40 Arachis hypogaea HOM05D005493 ORTHO05D007154 1.3e-81 307.4 289 65.4
Thhalv10000943m.g Eutrema salsugineum HOM05D005493 ORTHO05D007154 1.5e-80 303.9 298 66.1
C07p31340 Brassica napus HOM05D005493 ORTHO05D007154 1.9e-80 303.5 328 59.5
Dinv15338 Davidia involucrata HOM05D005493 ORTHO05D007154 1.9e-80 303.5 257 65.4
A06p44860 Brassica napus HOM05D005493 ORTHO05D007154 3.3e-80 302.8 298 65.1
CARHR173630 Cardamine hirsuta HOM05D005493 ORTHO05D007154 7.4e-80 301.6 294 63.3
Sabra06G0004100 Salix brachista HOM05D005493 ORTHO05D007154 7.4e-80 301.6 249 63.1
BraA06t27358Z Brassica rapa HOM05D005493 ORTHO05D007154 9.7e-80 301.2 298 64.8
Prupe.4G003700 Prunus persica HOM05D005493 ORTHO05D007154 9.7e-80 301.2 225 66.2
ATR0751G138 Amborella trichopoda HOM05D005493 ORTHO05D007154 4.8e-79 298.9 295 61.0
MSTRG.7128 Avicennia marina HOM05D005493 ORTHO05D007154 6.3e-79 298.5 285 65.3
BcaC04g21607 Brassica carinata HOM05D005493 ORTHO05D007154 6.3e-79 298.5 316 63.0
A09p23180 Brassica napus HOM05D005493 ORTHO05D007154 8.2e-79 298.1 337 59.6
BraA09t37921Z Brassica rapa HOM05D005493 ORTHO05D007154 8.2e-79 298.1 337 59.6
CDE05G0194 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 8.2e-79 298.1 298 56.0
BolC9t55855H Brassica oleracea HOM05D005493 ORTHO05D007154 1.1e-78 297.7 320 62.2
C09p29920 Brassica napus HOM05D005493 ORTHO05D007154 1.8e-78 297.0 316 62.7
Oeu025962.1 Olea europaea HOM05D005493 ORTHO05D007154 2.4e-78 296.6 190 73.7
RcHm_v2.0_Chr2g0120371 Rosa chinensis HOM05D005493 ORTHO05D007154 3.1e-78 296.2 277 66.4
Rhsim13G0140600 Rhododendron simsii HOM05D005493 ORTHO05D007154 5.3e-78 295.4 311 55.9
vmacro03608 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 5.3e-78 295.4 364 48.9
SGA_v2.0_scaffold186G40127 Striga asiatica HOM05D005493 ORTHO05D007154 7.6e-77 291.6 280 55.7
FvH4_1g24140 Fragaria vesca HOM05D005493 ORTHO05D007154 1.4e-75 287.3 335 57.3
FAN19G1729 Fragaria x ananassa HOM05D005493 ORTHO05D007154 1.4e-75 287.3 335 57.3
FAN23G1811 Fragaria x ananassa HOM05D005493 ORTHO05D007154 1.4e-75 287.3 335 57.9
MD10G1339200 Malus domestica HOM05D005493 ORTHO05D007154 1.4e-75 287.3 220 64.5
Ca_00763_v3 Cicer arietinum L. HOM05D005493 ORTHO05D007154 3.3e-72 276.2 254 61.0
AT5G47680 Arabidopsis thaliana HOM05D005493 ORTHO05D007154 4.3e-72 275.8 287 63.8
BcaC06g31350 Brassica carinata HOM05D005493 ORTHO05D007154 7.4e-72 275.0 298 62.8
AL8G10270 Arabidopsis lyrata HOM05D005493 ORTHO05D007154 3.1e-70 269.6 320 57.5
Sc17g0007990 Simmondsia chinensis HOM05D005493 ORTHO05D007154 5.9e-69 265.4 238 60.5
BcaC06g34232 Brassica carinata HOM05D005493 ORTHO05D007154 2.2e-68 263.5 294 57.1
AUR62034063 Chenopodium quinoa HOM05D005493 ORTHO05D007154 6.1e-66 255.4 154 76.6
BolC7t43675H Brassica oleracea HOM05D005493 ORTHO05D007154 4.4e-64 249.2 250 66.8
Pp3c1_33120 Physcomitrium patens HOM05D005493 ORTHO05D007154 9.7e-64 248.1 275 48.7
SEGI_02626 Sequoiadendron giganteum HOM05D005493 ORTHO05D007154 3.1e-62 243.0 276 50.4
HPP92_027483 Vanilla planifolia HOM05D005493 ORTHO05D007154 7.0e-62 241.9 233 51.5
Mapoly0011s0174 Marchantia polymorpha HOM05D005493 ORTHO05D007154 5.7e-56 222.2 266 52.6
Pp3c2_12110 Physcomitrium patens HOM05D005493 ORTHO05D007154 9.7e-56 221.5 274 46.0
GSVIVG01002894001 Vitis vinifera HOM05D005493 ORTHO05D007154 3.1e-54 216.5 126 81.0
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 8.5e-52 208.4 236 45.8
Sabra16G0010400 Salix brachista HOM05D005493 ORTHO05D007154 8.5e-52 208.4 258 55.4
SMO358G0363 Selaginella moellendorffii HOM05D005493 ORTHO05D007154 3.6e-50 203.0 265 44.9
Os02g0725600 Oryza sativa ssp. japonica HOM05D005493 ORTHO05D007154 1.8e-46 190.7 115 83.5
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 5.0e-44 182.6 124 68.5
AagrBONN_evm.TU.Sc2ySwM_362.2751 Anthoceros agrestis HOM05D005493 ORTHO05D007154 2.0e-37 160.6 256 39.8
Zm00001eb264500 Zea mays HOM05D005493 ORTHO05D007154 8.6e-36 155.2 95 80.0
Zm00001eb070580 Zea mays HOM05D005493 ORTHO05D007154 1.1e-35 154.8 93 81.7
Cre06.g278500 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 3.3e-35 153.3 193 41.5
MCO13G503 Micromonas commoda HOM05D005493 ORTHO05D007154 7.2e-35 152.1 177 42.9
Actinidia11906 Actinidia chinensis HOM05D005493 ORTHO05D007154 1.1e-30 138.3 177 44.6
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-25 120.6 187 31.6
unitig_37.g12178 Utricularia gibba HOM05D005493 ORTHO05D007154 8.3e-23 112.1 171 53.2
Zm00001eb168490 Zea mays HOM05D000087 ORTHO05D011931 2.4e-22 110.5 68 77.9
PRCOL_00000725 Prasinoderma coloniale HOM05D005493 ORTHO05D007154 5.4e-22 109.4 196 31.1
Cfa025804 Carpinus fangiana HOM05D005493 ORTHO05D007154 2.2e-15 87.4 104 47.1
SHI50428 Sapria himalayana HOM05D005493 ORTHO05D007154 6.4e-15 85.9 123 39.8
Cre02.g119350 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 1.6e-13 81.3 183 30.6
Cre10.g456851 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 5.6e-11 72.8 191 28.3
vmacro23227 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 6.8e-09 65.9 70 50.0
unitig_37.g12179 Utricularia gibba HOM05D005493 ORTHO05D007154 3.4e-08 63.5 40 80.0
MCO11G471 Micromonas commoda HOM05D050729 ORTHO05D049153 1.7e-07 61.2 98 30.6


User provided reference genes

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