Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 0.0e+00 1112.8 574 100.0
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 2.5e-264 915.2 562 82.9
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 1.1e-256 889.8 570 80.4
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 8.8e-254 880.2 563 79.9
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 2.6e-253 878.6 567 79.4
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 2.4e-251 872.1 547 80.8
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 1.3e-249 866.3 562 78.6
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 3.8e-249 864.8 565 78.2
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 1.5e-248 862.8 566 77.6
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 1.2e-247 859.8 563 78.2
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.6e-247 859.4 565 77.7
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 3.6e-247 858.2 565 77.5
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 6.7e-246 854.0 564 78.0
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 4.4e-245 851.3 563 76.0
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 9.7e-245 850.1 563 76.4
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 1.3e-244 849.7 571 77.1
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 6.3e-244 847.4 551 78.6
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 8.2e-244 847.0 559 77.3
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 1.4e-243 846.3 563 75.5
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 2.7e-242 842.0 561 76.1
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 3.5e-242 841.6 563 76.2
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 5.9e-242 840.9 565 76.5
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 2.9e-241 838.6 564 76.1
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 3.8e-241 838.2 563 76.9
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 1.1e-240 836.6 550 78.0
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 3.6e-239 831.6 562 75.4
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 3.6e-239 831.6 570 75.4
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 4.7e-239 831.2 564 74.3
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 1.0e-238 830.1 566 75.3
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 1.4e-238 829.7 560 74.5
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 5.2e-238 827.8 559 75.7
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 6.8e-238 827.4 564 73.9
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 2.6e-237 825.5 571 75.0
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 4.4e-237 824.7 571 75.0
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 4.8e-236 821.2 566 74.4
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 6.3e-236 820.8 568 73.8
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 8.3e-236 820.5 564 73.6
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 1.1e-235 820.1 558 73.3
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 7.0e-235 817.4 564 72.9
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 1.6e-234 816.2 580 73.4
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 2.0e-234 815.8 564 75.2
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 4.5e-234 814.7 565 74.2
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 4.5e-234 814.7 566 72.6
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 1.6e-231 806.2 624 69.4
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 2.7e-231 805.4 560 73.9
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 1.4e-230 803.1 563 73.2
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 8.8e-230 800.4 563 73.0
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 4.4e-229 798.1 550 74.2
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 4.4e-229 798.1 553 74.7
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 5.7e-229 797.7 561 72.4
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 9.8e-229 797.0 551 73.3
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 2.2e-228 795.8 572 71.2
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 3.7e-228 795.0 562 72.8
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 6.3e-228 794.3 562 72.4
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 6.3e-228 794.3 560 72.3
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 8.3e-228 793.9 562 72.8
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 1.4e-227 793.1 546 72.7
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 1.8e-227 792.7 562 71.5
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 1.8e-227 792.7 562 72.8
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 3.1e-227 792.0 562 72.2
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 5.4e-227 791.2 584 70.7
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 2.0e-226 789.3 562 72.1
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 2.0e-226 789.3 562 71.9
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 2.7e-226 788.9 562 71.0
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 1.3e-225 786.6 547 73.5
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 3.8e-225 785.0 562 71.7
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 5.0e-225 784.6 568 71.7
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 1.9e-224 782.7 559 71.2
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 2.8e-223 778.9 547 74.4
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 1.8e-222 776.2 559 70.8
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 2.0e-221 772.7 566 72.3
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 1.6e-218 763.1 584 68.0
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 1.3e-217 760.0 564 69.1
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 2.3e-217 759.2 610 67.7
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 3.9e-217 758.4 560 68.6
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 3.3e-216 755.4 554 70.8
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 7.3e-216 754.2 581 68.5
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 4.0e-214 748.4 557 69.3
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 2.0e-213 746.1 570 68.2
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 9.2e-211 737.3 568 68.7
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 3.5e-210 735.3 535 73.1
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 2.1e-207 726.1 612 65.8
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 2.3e-206 722.6 585 67.4
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 1.7e-204 716.5 560 65.7
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 3.5e-202 708.8 580 66.6
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 4.4e-197 691.8 548 67.0
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 4.9e-196 688.3 511 69.9
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 3.3e-192 675.6 429 80.9
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 4.5e-173 612.1 564 57.8
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.9e-171 606.7 431 73.3
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 4.2e-171 605.5 570 55.8
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 6.9e-166 588.2 685 50.5
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.3e-156 557.4 560 54.6
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 6.3e-151 538.5 555 53.7
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 1.5e-144 517.3 563 49.6
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 1.8e-118 430.6 319 70.5
PGSC0003DMG403014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 1.1e-107 394.8 273 73.6
HPP92_009392 Vanilla planifolia HOM05D006362 ORTHO05D008295 4.7e-106 389.4 275 72.0
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 2.3e-97 360.5 283 64.3
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 8.6e-92 342.0 219 79.0
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 4.0e-73 280.0 195 72.8
SEGI_18975 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 1.3e-55 221.9 163 68.7
CBR_g57499 Chara braunii HOM05D006362 ORTHO05D008295 1.4e-49 201.8 240 43.3
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 8.4e-47 192.6 294 44.9
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 2.6e-40 171.0 142 61.3
Gorai.002G084600 Gossypium raimondii HOM05D006362 ORTHO05D008295 1.1e-38 165.6 120 66.7
Gohir.D01G063866 Gossypium hirsutum HOM05D006362 ORTHO05D008295 6.1e-37 159.8 120 65.0
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 8.8e-36 156.0 112 74.1
SEGI_13710 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 3.3e-35 154.1 136 55.9
Hma1.2p1_1609F.1_g293480 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 7.7e-32 142.9 182 47.8
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 6.5e-31 139.8 113 66.4
HPP92_009393 Vanilla planifolia HOM05D006362 ORTHO05D008295 1.2e-21 109.0 115 53.0
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 2.6e-19 101.3 117 47.9
SMO347G0562 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 3.3e-19 100.9 179 37.4
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 1.8e-17 95.1 82 59.8
SMO228G0126 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.9e-14 85.1 187 33.7
Cc02_g13940 Coffea canephora HOM05D006362 ORTHO05D008295 5.2e-12 77.0 55 74.5
SMO167G0061 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 5.2e-12 77.0 142 39.4
SMO111G0176 Selaginella moellendorffii HOM05D013632 ORTHO05D008295 1.2e-11 75.9 95 42.1
BcaB04g20946 Brassica carinata HOM05D006362 ORTHO05D008295 1.8e-09 68.6 45 68.9
Cpa.g.sc131.91 Carica papaya HOM05D006362 ORTHO05D116658 2.7e-08 64.7 37 86.5
SMO122G0015 Selaginella moellendorffii HOM05D006362 ORTHO05D374567 1.1e-06 59.3 95 35.8


User provided reference genes

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