Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03309 Aquilegia oxysepala HOM05D005148 ORTHO05D006218 1.2e-177 627.1 534 100.0
Aqoxy3G00120 Aquilegia oxysepala HOM05D005148 ORTHO05D006218 1.7e-174 616.7 534 99.1
QL06p002269 Quercus lobata HOM05D005148 ORTHO05D006218 1.2e-68 265.0 174 78.7
Thecc.07G044600 Theobroma cacao HOM05D005148 ORTHO05D006218 5.2e-67 259.6 193 72.5
Prupe.4G208000 Prunus persica HOM05D005148 ORTHO05D006218 1.2e-66 258.5 174 76.4
MD03G1208700 Malus domestica HOM05D005148 ORTHO05D006218 2.0e-66 257.7 193 72.5
Duzib268G1307 Durio zibethinus HOM05D005148 ORTHO05D006218 4.4e-66 256.5 198 70.7
Gohir.A13G139300 Gossypium hirsutum HOM05D005148 ORTHO05D006218 5.8e-66 256.1 193 72.0
CiPaw.11G186500 Carya illinoinensis HOM05D005148 ORTHO05D006218 9.9e-66 255.4 193 71.0
Eucgr.F00968 Eucalyptus grandis HOM05D005148 ORTHO05D006218 1.7e-65 254.6 193 70.5
Nn1g03595 Nelumbo nucifera HOM05D005148 ORTHO05D006218 2.9e-65 253.8 174 74.1
Dinv40732 Davidia involucrata HOM05D005148 ORTHO05D006218 1.1e-64 251.9 199 67.8
TAR626G1940 Trochodendron aralioides HOM05D005148 ORTHO05D006218 1.1e-64 251.9 175 73.7
Gohir.D13G144100 Gossypium hirsutum HOM05D005148 ORTHO05D006218 2.4e-64 250.8 170 76.5
Gorai.013G161200 Gossypium raimondii HOM05D005148 ORTHO05D006218 2.4e-64 250.8 174 75.9
MD11G1223400 Malus domestica HOM05D005148 ORTHO05D006218 5.4e-64 249.6 193 69.9
Sed0006852 Sechium edule HOM05D005148 ORTHO05D006218 5.4e-64 249.6 174 74.1
Hma1.2p1_0938F.1_g239180 Hydrangea macrophylla HOM05D005148 ORTHO05D006218 7.1e-64 249.2 173 74.6
Nn1g07082 Nelumbo nucifera HOM05D005148 ORTHO05D006218 2.7e-63 247.3 175 74.3
QL03p062207 Quercus lobata HOM05D005148 ORTHO05D006218 7.8e-63 245.7 165 77.0
QL03p062820 Quercus lobata HOM05D005148 ORTHO05D006218 7.8e-63 245.7 165 77.0
Ciclev10008061m.g Citrus clementina HOM05D005148 ORTHO05D006218 1.7e-62 244.6 192 69.8
ATR0752G127 Amborella trichopoda HOM05D005148 ORTHO05D006218 8.6e-62 242.3 185 69.2
CSS0036538 Camellia sinensis var. sinensis HOM05D005148 ORTHO05D006218 1.9e-61 241.1 173 72.3
Duzib213G0030 Durio zibethinus HOM05D005148 ORTHO05D006218 2.5e-61 240.7 226 61.1
Rhsim04G0000500 Rhododendron simsii HOM05D005148 ORTHO05D006218 2.5e-61 240.7 177 70.6
Ca_14709_v3 Cicer arietinum L. HOM05D005148 ORTHO05D006218 7.3e-61 239.2 194 66.0
GSVIVG01030604001 Vitis vinifera HOM05D005148 ORTHO05D006218 7.3e-61 239.2 172 71.5
Atru.chr2.3744 Acer truncatum HOM05D005148 ORTHO05D006218 2.1e-60 237.7 176 71.6
FAN21G2996 Fragaria x ananassa HOM05D005148 ORTHO05D006218 2.1e-60 237.7 174 69.5
Atru.chr2.3757 Acer truncatum HOM05D005148 ORTHO05D006218 2.8e-60 237.3 173 72.8
Glyma.09G101200 Glycine max HOM05D005148 ORTHO05D006218 3.6e-60 236.9 175 70.9
TWI38G1498 Tripterygium wilfordii HOM05D005148 ORTHO05D006218 4.7e-60 236.5 185 65.9
CAN.G1781.10 Capsicum annuum HOM05D005148 ORTHO05D006218 8.1e-60 235.7 173 67.6
FAN16G3277 Fragaria x ananassa HOM05D005148 ORTHO05D006218 8.1e-60 235.7 174 69.5
Lsat_1_v5_gn_5_13800 Lactuca sativa HOM05D005148 ORTHO05D006218 8.1e-60 235.7 158 74.7
QL08p012200 Quercus lobata HOM05D005148 ORTHO05D006218 8.1e-60 235.7 126 88.1
FvH4_3g22101 Fragaria vesca HOM05D005148 ORTHO05D006218 1.1e-59 235.3 174 69.0
Lalb_Chr20g0114191 Lupinus albus HOM05D005148 ORTHO05D006218 1.1e-59 235.3 178 68.5
Dinv22285 Davidia involucrata HOM05D005148 ORTHO05D006218 1.4e-59 235.0 174 70.7
Manes.03G127500 Manihot esculenta HOM05D005148 ORTHO05D006218 1.8e-59 234.6 169 71.6
HanXRQChr08g0235221 Helianthus annuus HOM05D005148 ORTHO05D006218 2.4e-59 234.2 176 70.5
VMungo0540G1829 Vigna mungo HOM05D005148 ORTHO05D006218 2.4e-59 234.2 173 69.4
Cc05_g13470 Coffea canephora HOM05D005148 ORTHO05D006218 3.1e-59 233.8 172 69.2
Sc03g0008800 Simmondsia chinensis HOM05D005148 ORTHO05D006218 4.0e-59 233.4 164 70.7
PGSC0003DMG400014426 Solanum tuberosum HOM05D005148 ORTHO05D006218 4.0e-59 233.4 174 69.0
RcHm_v2.0_Chr5g0037921 Rosa chinensis HOM05D005148 ORTHO05D006218 6.8e-59 232.6 174 68.4
Sopen10g002340 Solanum pennellii HOM05D005148 ORTHO05D006218 6.8e-59 232.6 174 69.5
Nitab4.5_0005048g0010 Nicotiana tabacum HOM05D005148 ORTHO05D006218 1.5e-58 231.5 202 60.9
Potri.001G420400 Populus trichocarpa HOM05D005148 ORTHO05D006218 1.5e-58 231.5 178 69.1
arahy.Tifrunner.gnm1.ann1.XKJ78D Arachis hypogaea HOM05D005148 ORTHO05D006218 2.0e-58 231.1 178 67.4
ECA246G0930 Erigeron canadensis HOM05D005148 ORTHO05D006218 2.0e-58 231.1 172 70.3
Medtr3g049440 Medicago truncatula HOM05D005148 ORTHO05D006218 2.6e-58 230.7 172 69.2
Ah.04g165650 Amaranthus hybridus HOM05D001748 ORTHO05D001759 3.4e-58 230.3 168 68.5
Cpa.g.sc97.43 Carica papaya HOM05D005148 ORTHO05D006218 3.4e-58 230.3 152 77.6
arahy.Tifrunner.gnm1.ann1.ICWX02 Arachis hypogaea HOM05D005148 ORTHO05D006218 4.4e-58 229.9 176 67.6
Migut.H01845 Erythranthe guttata HOM05D005148 ORTHO05D006218 4.4e-58 229.9 173 67.1
Manes.15G074502 Manihot esculenta HOM05D005148 ORTHO05D006218 4.4e-58 229.9 219 60.3
CsaV3_3G023250 Cucumis sativus L. HOM05D005148 ORTHO05D006218 7.6e-58 229.2 172 68.0
HPP92_019925 Vanilla planifolia HOM05D005148 ORTHO05D006218 7.6e-58 229.2 177 68.9
Atru.chr2.3269 Acer truncatum HOM05D005148 ORTHO05D006218 1.7e-57 228.0 128 84.4
Lj6g0026690 Lotus japonicus HOM05D005148 ORTHO05D006218 1.7e-57 228.0 150 74.7
Cfa020393 Carpinus fangiana HOM05D001748 ORTHO05D001759 2.2e-57 227.6 193 63.2
Psat5g183400 Pisum sativum HOM05D005148 ORTHO05D006218 2.9e-57 227.3 193 64.2
Glyma.18G102900 Glycine max HOM05D005148 ORTHO05D006218 3.8e-57 226.9 146 76.0
CARHR096320 Cardamine hirsuta HOM05D005148 ORTHO05D006218 4.9e-57 226.5 171 67.3
Solyc10g006390.3 Solanum lycopersicum HOM05D005148 ORTHO05D006218 4.9e-57 226.5 174 68.4
AUR62008441 Chenopodium quinoa HOM05D005148 ORTHO05D006218 8.4e-57 225.7 151 71.5
PSO541G0017 Papaver somniferum HOM05D005148 ORTHO05D006218 8.4e-57 225.7 158 73.4
BcaB04g19113 Brassica carinata HOM05D005148 ORTHO05D006218 1.1e-56 225.3 193 61.7
PGR042G3618 Punica granatum HOM05D005148 ORTHO05D006218 1.9e-56 224.6 187 64.7
Carub.0003s2052 Capsella rubella HOM05D005148 ORTHO05D006218 2.4e-56 224.2 173 66.5
COL.COLO4_09623 Corchorus olitorius HOM05D005148 ORTHO05D006218 2.4e-56 224.2 157 73.2
AL3G34380 Arabidopsis lyrata HOM05D005148 ORTHO05D006218 3.2e-56 223.8 172 66.9
Sp3g18560 Schrenkiella parvula HOM05D005148 ORTHO05D006218 3.2e-56 223.8 171 65.5
Phvul.006G037500 Phaseolus vulgaris HOM05D005148 ORTHO05D006218 4.2e-56 223.4 173 65.9
PSO675G4432 Papaver somniferum HOM05D005148 ORTHO05D006218 5.4e-56 223.0 152 75.0
CANSAT54G0232 Cannabis sativa HOM05D005148 ORTHO05D006218 1.2e-55 221.9 175 65.1
RcHm_v2.0_Chr4g0405041 Rosa chinensis HOM05D005148 ORTHO05D006218 1.6e-55 221.5 174 64.9
CDE05G0897 Ceratophyllum demersum HOM05D005148 ORTHO05D006218 2.1e-55 221.1 177 65.5
Nitab4.5_0001393g0210 Nicotiana tabacum HOM05D005148 ORTHO05D006218 2.1e-55 221.1 131 77.1
MSTRG.12962 Avicennia marina HOM05D005148 ORTHO05D006218 3.5e-55 220.3 163 67.5
C03p51180 Brassica napus HOM05D005148 ORTHO05D006218 3.5e-55 220.3 192 60.4
TPR.G13552 Trifolium pratense HOM05D005148 ORTHO05D006218 6.0e-55 219.5 119 86.6
BraA03t13333Z Brassica rapa HOM05D005148 ORTHO05D006218 1.0e-54 218.8 192 59.9
BcaC01g03550 Brassica carinata HOM05D005148 ORTHO05D006218 1.3e-54 218.4 192 59.9
A03p41800 Brassica napus HOM05D005148 ORTHO05D006218 1.3e-54 218.4 192 59.9
BolC3t17407H Brassica oleracea HOM05D005148 ORTHO05D006218 1.3e-54 218.4 192 59.9
EL10Ac4g07904 Beta vulgaris HOM05D005148 ORTHO05D006218 6.6e-54 216.1 126 77.0
AUR62021649 Chenopodium quinoa HOM05D005148 ORTHO05D006218 2.5e-53 214.2 166 65.1
SEGI_03914 Sequoiadendron giganteum HOM05D005148 ORTHO05D006218 5.6e-53 213.0 190 61.6
SGA_v2.0_scaffold115G32129 Striga asiatica HOM05D005148 ORTHO05D006218 1.3e-52 211.8 157 66.2
AT3G20550 Arabidopsis thaliana HOM05D005148 ORTHO05D006218 1.6e-52 211.5 125 77.6
EL10Ac5g11049 Beta vulgaris HOM05D005148 ORTHO05D006218 1.1e-51 208.8 153 68.0
Zm00001eb286040 Zea mays HOM05D005148 ORTHO05D006218 1.8e-51 208.0 176 63.1
CDE02G2943 Ceratophyllum demersum HOM05D005148 ORTHO05D006218 5.3e-51 206.5 176 63.1
Hund14204 Selenicereus undatus HOM05D005148 ORTHO05D006218 5.8e-50 203.0 145 67.6
Aqoxy5G02091 Aquilegia oxysepala HOM05D005148 ORTHO05D006218 9.9e-50 202.2 164 67.1
Haze_06035 Corylus avellana HOM05D001748 ORTHO05D006218 1.7e-49 201.4 219 54.8
Aa31LG8G7350 Aethionema arabicum HOM05D005148 ORTHO05D006218 5.4e-48 196.4 174 60.3
Medtr5g081620 Medicago truncatula HOM05D005148 ORTHO05D006218 9.3e-48 195.7 103 87.4
CBR_g38419 Chara braunii HOM05D005148 ORTHO05D006218 3.5e-47 193.7 125 74.4
Mapoly0068s0031 Marchantia polymorpha HOM05D005148 ORTHO05D006218 1.0e-46 192.2 193 56.5
Os05g0545600 Oryza sativa ssp. japonica HOM05D005148 ORTHO05D006218 1.7e-46 191.4 172 59.9
AagrBONN_evm.TU.Sc2ySwM_362.1748 Anthoceros agrestis HOM05D005148 ORTHO05D006218 2.3e-46 191.0 172 59.9
Pp3c19_14080 Physcomitrium patens HOM05D005148 ORTHO05D006218 1.1e-45 188.7 175 58.9
Potri.011G136102 Populus trichocarpa HOM05D005148 ORTHO05D006218 4.8e-44 183.3 139 68.3
DCAR_019897 Daucus carota HOM05D005148 ORTHO05D006218 9.0e-43 179.1 180 55.6
FAN05G2630 Fragaria x ananassa HOM05D005148 ORTHO05D006218 6.4e-41 172.9 113 71.7
FAN09G4771 Fragaria x ananassa HOM05D005148 ORTHO05D006218 4.2e-40 170.2 113 69.9
FvH4_6g43590 Fragaria vesca HOM05D005148 ORTHO05D006218 2.7e-39 167.5 113 68.1
Oeu007601.1 Olea europaea HOM05D005148 ORTHO05D006218 2.7e-39 167.5 92 78.3
SMO367G0870 Selaginella moellendorffii HOM05D005148 ORTHO05D006218 1.1e-37 162.2 108 71.3
FAN14G1203 Fragaria x ananassa HOM05D005148 ORTHO05D006218 4.3e-37 160.2 113 66.4
Rhsim04G0001600 Rhododendron simsii HOM05D005148 ORTHO05D006218 2.0e-34 151.4 172 55.8
ClCG05G014480 Citrullus lanatus HOM05D005148 ORTHO05D006218 3.2e-32 144.1 225 44.4
Peaxi162Scf00032g02417 Petunia axillaris HOM05D005148 ORTHO05D006218 1.6e-31 141.7 135 54.1
FAN11G3177 Fragaria x ananassa HOM05D005148 ORTHO05D006218 2.7e-31 141.0 186 47.8
MCO09G834 Micromonas commoda HOM05D005148 ORTHO05D006218 6.7e-30 136.3 116 60.3
Haze_09643 Corylus avellana HOM05D005148 ORTHO05D006218 1.1e-29 135.6 119 63.0
Actinidia10720 Actinidia chinensis HOM05D005148 ORTHO05D006218 1.3e-28 132.1 70 80.0
MELO3C018081.2 Cucumis melo HOM05D005148 ORTHO05D006218 5.3e-27 126.7 80 77.5
Cre09.g390430 Chlamydomonas reinhardtii HOM05D005148 ORTHO05D006218 4.5e-26 123.6 123 55.3
unitig_22.g5751 Utricularia gibba HOM05D005148 ORTHO05D006218 2.9e-25 120.9 171 46.2
vmacro09737 Vaccinium macrocarpon HOM05D005148 ORTHO05D006218 5.5e-24 116.7 139 51.1
MELO3C030736.2 Cucumis melo HOM05D005148 ORTHO05D006218 5.1e-22 110.2 55 89.1
PRCOL_00003554 Prasinoderma coloniale HOM05D005148 ORTHO05D006218 1.1e-21 109.0 98 56.1
Sabra16G0285400 Salix brachista HOM05D005148 ORTHO05D006218 4.3e-21 107.1 145 50.3
Haze_09642 Corylus avellana HOM05D005148 ORTHO05D006218 7.4e-21 106.3 74 68.9
SalBow7G4088 Salvia bowleyana HOM05D005148 ORTHO05D006218 1.3e-20 105.5 171 40.9
Thhalv10011119m.g Eutrema salsugineum HOM05D005148 ORTHO05D006218 3.7e-20 104.0 55 76.4
Thhalv10024125m.g Eutrema salsugineum HOM05D005148 ORTHO05D006218 3.7e-20 104.0 55 76.4
TPR.G40522 Trifolium pratense HOM05D005148 ORTHO05D006218 2.2e-17 94.7 49 85.7
TPR.G13540 Trifolium pratense HOM05D005148 ORTHO05D006218 6.5e-17 93.2 49 83.7
AT2G24410 Arabidopsis thaliana HOM05D005148 ORTHO05D006218 3.2e-16 90.9 65 66.2
Cfa025954 Carpinus fangiana HOM05D005148 ORTHO05D006218 2.1e-15 88.2 178 38.2
MD06G1125500 Malus domestica HOM05D005148 ORTHO05D006218 1.4e-14 85.5 101 42.6
C01p18700 Brassica napus HOM05D005148 ORTHO05D006218 9.7e-13 79.3 52 69.2
Actinidia10719 Actinidia chinensis HOM05D005148 ORTHO05D006218 2.8e-12 77.8 89 61.8
RcHm_v2.0_Chr2g0160171 Rosa chinensis HOM05D005148 ORTHO05D006218 9.1e-11 72.8 63 57.1
Lsat_1_v5_gn_5_38280 Lactuca sativa HOM05D005148 ORTHO05D006218 1.1e-08 65.9 48 62.5


User provided reference genes

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