Gene: Solyc10g006390.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g006390.3
  • Transcript Identifier Solyc10g006390.3.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 889834-895968 : negative

Gene Family Information

  • ID HOM05D005148
  • #Genes/#Species 146/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g006390.3.1
  • uniprot A0A3Q7IB77
  • gene_id Solyc10g006390

Descriptions

  • Description Smad nuclear-interacting protein 1 (AHRD V3.3 *** A0A2G2YIQ3_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035196
IBA
GOA Databaseproduction of miRNAs involved in gene silencing by miRNA
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT3G20550
GO:0048638
ISO
PLAZA Integrative Orthologyregulation of developmental growth AT3G20550

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT3G20550

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G20550

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000253 Forkhead-associated (FHA) domain
IPR008984 SMAD/FHA domain superfamily
Mapman id Description
16.9.2.2 RNA processing.mRNA silencing.miRNA pathway.pri-miRNA-DCL1 association factor (DAWDLE)