Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 6.0e-135 484.2 247 100.0
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.2e-103 380.2 251 77.3
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.5e-101 373.2 249 74.3
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 3.3e-101 372.1 250 77.2
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 4.4e-101 371.7 254 74.0
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 5.7e-101 371.3 250 75.6
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 9.7e-101 370.5 249 75.9
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 1.3e-100 370.2 254 74.4
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 1.3e-100 370.2 249 73.5
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 3.7e-100 368.6 249 73.1
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 6.3e-100 367.9 250 74.8
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 1.8e-99 366.3 252 71.8
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.2e-98 363.6 252 73.8
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.6e-98 363.2 258 72.5
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.6e-98 363.2 252 73.8
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 2.0e-98 362.8 249 71.9
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 2.6e-98 362.5 245 73.9
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 2.6e-98 362.5 254 72.8
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 3.5e-98 362.1 254 72.8
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 4.5e-98 361.7 250 72.4
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 1.0e-97 360.5 250 73.2
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 1.3e-97 360.1 251 72.1
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 1.3e-97 360.1 251 72.1
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 1.7e-97 359.8 231 77.5
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 1.7e-97 359.8 251 73.3
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 2.9e-97 359.0 256 71.5
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 3.8e-97 358.6 248 74.6
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 5.0e-97 358.2 254 72.0
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 5.0e-97 358.2 251 72.5
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 5.0e-97 358.2 250 72.8
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 5.0e-97 358.2 248 73.8
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 6.5e-97 357.8 250 74.8
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 8.5e-97 357.5 250 72.8
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.5e-96 356.7 252 72.6
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 2.5e-96 355.9 250 71.6
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 2.5e-96 355.9 256 71.5
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 2.5e-96 355.9 253 72.7
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 9.4e-96 354.0 247 72.9
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 9.4e-96 354.0 248 73.8
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 2.1e-95 352.8 252 72.2
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.1e-95 352.8 247 73.7
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 2.7e-95 352.4 256 70.7
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 2.7e-95 352.4 249 71.1
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 2.7e-95 352.4 249 71.1
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 2.7e-95 352.4 251 71.3
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 3.6e-95 352.1 251 69.3
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 6.1e-95 351.3 250 71.6
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 6.1e-95 351.3 228 75.9
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 8.0e-95 350.9 252 71.8
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 8.0e-95 350.9 251 72.1
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 1.4e-94 350.1 254 72.0
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 1.8e-94 349.7 248 70.6
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.8e-94 349.7 254 70.1
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 2.3e-94 349.4 250 70.4
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 2.3e-94 349.4 248 69.8
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 3.0e-94 349.0 250 70.8
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 4.0e-94 348.6 249 71.5
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 5.2e-94 348.2 249 71.1
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 5.2e-94 348.2 254 70.5
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 1.2e-93 347.1 261 68.6
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 2.6e-93 345.9 252 69.8
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 2.6e-93 345.9 257 70.0
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 3.4e-93 345.5 250 70.8
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 5.7e-93 344.7 253 70.4
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 5.7e-93 344.7 250 69.2
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 9.8e-93 344.0 249 69.5
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.7e-92 343.2 252 71.0
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 1.7e-92 343.2 251 71.3
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.2e-92 342.8 247 70.4
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 2.2e-92 342.8 251 69.7
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.2e-92 342.8 265 68.3
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 2.8e-92 342.4 232 75.0
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 6.3e-92 341.3 248 70.2
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 8.3e-92 340.9 247 69.6
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 2.4e-91 339.3 251 70.1
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 4.1e-91 338.6 250 68.8
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 5.4e-91 338.2 250 70.8
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 5.4e-91 338.2 250 68.4
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 7.0e-91 337.8 266 68.0
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 7.0e-91 337.8 250 68.4
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 3.5e-90 335.5 263 66.9
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 5.9e-90 334.7 248 68.1
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.7e-89 333.2 257 65.8
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 2.2e-89 332.8 223 74.9
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 3.8e-89 332.0 257 65.4
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 3.2e-88 328.9 273 63.7
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 5.5e-88 328.2 247 68.0
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 7.2e-88 327.8 300 60.0
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.1e-87 326.2 235 72.3
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 3.6e-87 325.5 251 64.9
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 6.1e-87 324.7 251 66.1
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 1.8e-86 323.2 236 69.9
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 5.7e-85 318.2 215 74.4
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 5.7e-85 318.2 254 67.3
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 7.5e-85 317.8 235 68.5
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 3.7e-84 315.5 235 65.5
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 3.5e-82 308.9 219 72.1
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 2.3e-81 306.2 248 62.9
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 3.4e-77 292.4 224 67.9
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 5.7e-77 291.6 231 64.1
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.3e-76 290.4 178 81.5
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.7e-76 290.0 256 60.9
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 9.2e-75 284.3 222 64.9
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.9e-73 278.9 201 71.1
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 4.3e-72 275.4 253 60.9
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 2.8e-71 272.7 201 71.1
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 6.1e-71 271.6 174 75.9
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 1.4e-67 260.4 165 76.4
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 7.0e-67 258.1 191 69.1
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 2.7e-66 256.1 231 59.7
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 6.2e-63 245.0 243 54.3
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 8.1e-63 244.6 176 69.9
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 1.4e-62 243.8 182 68.1
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 3.2e-59 232.6 244 54.1
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 1.2e-58 230.7 218 54.6
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 5.1e-57 225.3 216 59.7
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 7.3e-56 221.5 242 50.8
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 8.1e-55 218.0 231 55.8
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 2.7e-50 203.0 135 71.1
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.3e-49 200.7 115 82.6
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.9e-44 183.0 101 83.2
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 3.0e-41 172.9 146 62.3
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.1e-40 171.0 139 66.9
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.3e-39 167.5 260 40.4
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.9e-35 153.7 138 62.3
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 2.2e-28 130.2 65 87.7
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.1e-24 117.9 78 71.8
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 2.4e-22 110.2 117 52.1
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 3.4e-21 106.3 57 82.5
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 5.5e-19 99.0 54 79.6
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.3e-15 87.8 73 64.4
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.6e-15 87.4 75 64.0
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 1.4e-14 84.3 71 60.6
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 1.8e-14 84.0 72 65.3
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 2.9e-12 76.6 75 60.0
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 2.7e-10 70.1 37 89.2
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-09 68.2 60 61.7
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 3.7e-07 59.7 66 53.0
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 4.1e-06 56.2 104 40.4


User provided reference genes

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