Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01890 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 1.3e-257 892.5 443 100.0
Aqoxy1G01891 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 4.0e-198 694.9 442 77.4
TAR626G0427 Trochodendron aralioides HOM05D003673 ORTHO05D004764 8.2e-191 670.6 435 76.6
Nn7g37943 Nelumbo nucifera HOM05D003673 ORTHO05D004764 2.0e-189 666.0 432 75.7
Dinv07706 Davidia involucrata HOM05D003673 ORTHO05D004764 7.1e-187 657.5 441 74.1
Cpa.g.sc50.111 Carica papaya HOM05D003673 ORTHO05D004764 1.3e-185 653.3 436 73.6
CSS0042622 Camellia sinensis var. sinensis HOM05D003673 ORTHO05D004764 8.7e-185 650.6 429 75.1
CiPaw.03G191900 Carya illinoinensis HOM05D003673 ORTHO05D004764 1.9e-184 649.4 441 73.5
ClCG11G016540 Citrullus lanatus HOM05D003673 ORTHO05D004764 2.5e-184 649.0 434 74.0
Ciclev10031587m.g Citrus clementina HOM05D003673 ORTHO05D004764 5.7e-184 647.9 420 76.0
Potri.002G057400 Populus trichocarpa HOM05D003673 ORTHO05D004764 9.7e-184 647.1 423 75.2
Manes.02G088900 Manihot esculenta HOM05D003673 ORTHO05D004764 1.6e-183 646.4 425 75.3
vmacro04781 Vaccinium macrocarpon HOM05D003673 ORTHO05D004764 1.6e-183 646.4 428 74.3
Sabra02G0046800 Salix brachista HOM05D003673 ORTHO05D004764 2.8e-183 645.6 434 73.3
HanXRQChr14g0451901 Helianthus annuus HOM05D003673 ORTHO05D004764 1.1e-182 643.7 428 74.3
Cfa023358 Carpinus fangiana HOM05D003673 ORTHO05D004764 3.1e-182 642.1 439 72.4
COL.COLO4_38400 Corchorus olitorius HOM05D003673 ORTHO05D004764 5.3e-182 641.3 427 74.5
CsaV3_4G032000 Cucumis sativus L. HOM05D003673 ORTHO05D004764 6.9e-182 641.0 431 73.5
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea HOM05D003673 ORTHO05D004764 1.5e-181 639.8 421 75.1
MELO3C022961.2 Cucumis melo HOM05D003673 ORTHO05D004764 1.5e-181 639.8 431 73.3
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea HOM05D003673 ORTHO05D004764 4.5e-181 638.3 421 74.8
Carub.0001s0594 Capsella rubella HOM05D003673 ORTHO05D004764 1.0e-180 637.1 433 72.7
FAN14G2563 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.0e-180 637.1 429 73.7
Sed0005423 Sechium edule HOM05D003673 ORTHO05D004764 1.3e-180 636.7 440 71.8
Thecc.01G168600 Theobroma cacao HOM05D003673 ORTHO05D004764 1.3e-180 636.7 431 73.3
FvH4_6g38670 Fragaria vesca HOM05D003673 ORTHO05D004764 2.2e-180 636.0 429 73.7
CANSAT64G2396 Cannabis sativa HOM05D003673 ORTHO05D004764 5.0e-180 634.8 417 75.8
FAN05G2105 Fragaria x ananassa HOM05D003673 ORTHO05D004764 8.5e-180 634.0 430 73.0
Prupe.3G177700 Prunus persica HOM05D003673 ORTHO05D004764 1.1e-179 633.6 440 71.6
TWI59G0698 Tripterygium wilfordii HOM05D003673 ORTHO05D004764 1.1e-179 633.6 432 72.5
CANSAT64G0060 Cannabis sativa HOM05D003673 ORTHO05D004764 1.4e-179 633.3 421 74.1
Haze_13556 Corylus avellana HOM05D003673 ORTHO05D004764 1.4e-179 633.3 434 71.7
Sp1g05330 Schrenkiella parvula HOM05D003673 ORTHO05D004764 1.4e-179 633.3 436 72.2
Gorai.001G092000 Gossypium raimondii HOM05D003673 ORTHO05D004764 1.9e-179 632.9 438 71.7
RcHm_v2.0_Chr2g0152131 Rosa chinensis HOM05D003673 ORTHO05D004764 1.9e-179 632.9 433 71.8
AL1G16600 Arabidopsis lyrata HOM05D003673 ORTHO05D004764 2.5e-179 632.5 419 74.7
Ca_06264_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 3.2e-179 632.1 427 72.1
Ca_30265_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 3.2e-179 632.1 427 72.1
Gohir.A07G080400 Gossypium hirsutum HOM05D003673 ORTHO05D004764 3.2e-179 632.1 438 71.9
TPR.G10168 Trifolium pratense HOM05D003673 ORTHO05D004764 3.2e-179 632.1 428 72.2
Gohir.D07G086000 Gossypium hirsutum HOM05D003673 ORTHO05D004764 4.2e-179 631.7 438 71.7
Rhsim07G0197900 Rhododendron simsii HOM05D003673 ORTHO05D004764 4.2e-179 631.7 437 71.6
EL10Ac9g22832 Beta vulgaris HOM05D003673 ORTHO05D004764 5.5e-179 631.3 420 74.0
FAN02G0649 Fragaria x ananassa HOM05D003673 ORTHO05D004764 5.5e-179 631.3 430 72.8
Ah.01g013590 Amaranthus hybridus HOM05D003673 ORTHO05D004764 7.2e-179 630.9 421 73.2
Medtr5g091060 Medicago truncatula HOM05D003673 ORTHO05D004764 7.2e-179 630.9 419 74.0
ECA238G4715 Erigeron canadensis HOM05D003673 ORTHO05D004764 9.4e-179 630.6 434 70.3
FAN09G3261 Fragaria x ananassa HOM05D003673 ORTHO05D004764 1.2e-178 630.2 430 72.8
PGR042G2748 Punica granatum HOM05D003673 ORTHO05D004764 2.1e-178 629.4 428 72.7
Lalb_Chr04g0248921 Lupinus albus HOM05D003673 ORTHO05D004764 7.9e-178 627.5 421 74.3
QL08p044989 Quercus lobata HOM05D003673 ORTHO05D004764 7.9e-178 627.5 435 72.0
Sc19g0001760 Simmondsia chinensis HOM05D003673 ORTHO05D004764 7.9e-178 627.5 433 71.8
Hund22282 Selenicereus undatus HOM05D003673 ORTHO05D004764 1.8e-177 626.3 427 71.2
AUR62015128 Chenopodium quinoa HOM05D003673 ORTHO05D004764 5.1e-177 624.8 446 69.1
Thhalv10007634m.g Eutrema salsugineum HOM05D003673 ORTHO05D004764 5.1e-177 624.8 419 74.2
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla HOM05D003673 ORTHO05D004764 5.1e-177 624.8 426 72.3
BcaNung07075 Brassica carinata HOM05D003673 ORTHO05D004764 6.7e-177 624.4 430 72.3
BcaC07g42060 Brassica carinata HOM05D003673 ORTHO05D004764 8.8e-177 624.0 432 71.5
A09p66930 Brassica napus HOM05D003673 ORTHO05D004764 1.1e-176 623.6 422 73.2
AUR62017589 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.5e-176 623.2 437 69.6
Aa31LG1G7910 Aethionema arabicum HOM05D003673 ORTHO05D004764 2.5e-176 622.5 419 72.3
PSO675G0095 Papaver somniferum HOM05D003673 ORTHO05D004764 4.3e-176 621.7 434 69.8
C05p04810 Brassica napus HOM05D003673 ORTHO05D004764 7.4e-176 620.9 424 72.4
MD17G1134800 Malus domestica HOM05D003673 ORTHO05D004764 1.3e-175 620.2 440 69.8
C08p51160 Brassica napus HOM05D003673 ORTHO05D004764 2.2e-175 619.4 430 71.4
BolC5t29254H Brassica oleracea HOM05D003673 ORTHO05D004764 2.2e-175 619.4 430 71.9
BolC8t52642H Brassica oleracea HOM05D003673 ORTHO05D004764 2.2e-175 619.4 430 71.4
THA.LOC104815838 Tarenaya hassleriana HOM05D003673 ORTHO05D004764 2.2e-175 619.4 424 73.1
A10p05210 Brassica napus HOM05D003673 ORTHO05D004764 6.3e-175 617.8 424 72.4
Eucgr.A02022 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.4e-174 616.7 434 70.5
BraA09t42028Z Brassica rapa HOM05D003673 ORTHO05D004764 1.8e-174 616.3 430 71.9
BraA10t42788Z Brassica rapa HOM05D003673 ORTHO05D004764 2.4e-174 615.9 424 71.9
LjContig00049g0013493 Lotus japonicus HOM05D003673 ORTHO05D004764 3.1e-174 615.5 427 71.7
Nitab4.5_0000006g0440 Nicotiana tabacum HOM05D003673 ORTHO05D004764 9.1e-174 614.0 425 70.4
Sopen07g023610 Solanum pennellii HOM05D003673 ORTHO05D004764 3.4e-173 612.1 431 69.6
Medtr5g090990 Medicago truncatula HOM05D003673 ORTHO05D004764 1.3e-172 610.1 417 71.2
Nitab4.5_0002201g0040 Nicotiana tabacum HOM05D003673 ORTHO05D004764 1.3e-172 610.1 427 69.8
PGSC0003DMG400017420 Solanum tuberosum HOM05D003673 ORTHO05D004764 1.3e-172 610.1 430 70.0
PGSC0003DMG400017707 Solanum tuberosum HOM05D003673 ORTHO05D004764 1.3e-172 610.1 434 69.4
Sopen05g024810 Solanum pennellii HOM05D003673 ORTHO05D004764 1.7e-172 609.8 419 71.4
Solyc07g045050.3 Solanum lycopersicum HOM05D003673 ORTHO05D004764 2.9e-172 609.0 431 69.6
Peaxi162Scf00416g00004 Petunia axillaris HOM05D003673 ORTHO05D004764 5.0e-172 608.2 430 68.6
MSTRG.14903 Avicennia marina HOM05D003673 ORTHO05D004764 8.5e-172 607.4 424 70.8
Glyma.14G030400 Glycine max HOM05D003673 ORTHO05D004764 2.5e-171 605.9 423 69.5
Eucgr.A02024 Eucalyptus grandis HOM05D003673 ORTHO05D004764 5.5e-171 604.7 429 68.3
CAN.G7.15 Capsicum annuum HOM05D003673 ORTHO05D004764 9.4e-171 604.0 425 69.2
Migut.M00071 Erythranthe guttata HOM05D003673 ORTHO05D004764 4.7e-170 601.7 425 68.9
DCAR_023045 Daucus carota HOM05D003673 ORTHO05D004764 6.1e-170 601.3 425 69.6
Medtr1g022325 Medicago truncatula HOM05D003673 ORTHO05D004764 6.1e-170 601.3 429 69.2
VMungo0647G2026 Vigna mungo HOM05D003673 ORTHO05D004764 3.0e-169 599.0 424 69.6
Oeu051389.1 Olea europaea HOM05D003673 ORTHO05D004764 6.7e-169 597.8 424 70.3
Psat2g017880 Pisum sativum HOM05D003673 ORTHO05D004764 6.7e-169 597.8 421 69.4
SGA_v2.0_scaffold73G24479 Striga asiatica HOM05D003673 ORTHO05D004764 6.7e-169 597.8 421 69.6
CDE05G0951 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 2.8e-167 592.4 440 69.1
Phvul.008G194300 Phaseolus vulgaris HOM05D003673 ORTHO05D004764 8.2e-167 590.9 424 67.9
PSO675G5654 Papaver somniferum HOM05D003673 ORTHO05D004764 5.9e-165 584.7 434 67.1
Eucgr.A02023 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.7e-164 583.2 431 65.9
CANSAT64G0777 Cannabis sativa HOM05D003673 ORTHO05D004764 3.8e-164 582.0 436 68.3
MBI18_g13605_MAGBIO Magnolia biondii HOM05D003673 ORTHO05D004764 5.0e-164 581.6 441 66.4
EL10Ac9g22831 Beta vulgaris HOM05D003673 ORTHO05D004764 3.2e-163 578.9 406 69.7
COL.COLO4_38402 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.2e-162 577.0 415 68.7
unitig_899.g15456 Utricularia gibba HOM05D003673 ORTHO05D004764 8.0e-162 574.3 420 68.8
SalBow1G2057 Salvia bowleyana HOM05D003673 ORTHO05D004764 2.6e-160 569.3 410 70.2
BcaB02g06780 Brassica carinata HOM05D003673 ORTHO05D004764 2.8e-159 565.8 422 68.7
Lsat_1_v5_gn_6_42781 Lactuca sativa HOM05D003673 ORTHO05D004764 3.1e-158 562.4 417 65.2
Dinv07089 Davidia involucrata HOM05D003673 ORTHO05D004764 1.5e-155 553.5 389 71.7
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.5e-155 553.5 399 70.2
PSO144G0168 Papaver somniferum HOM05D003673 ORTHO05D004764 7.2e-155 551.2 433 64.2
PSO210G5105 Papaver somniferum HOM05D003673 ORTHO05D004764 8.0e-154 547.7 430 62.6
Lsat_1_v5_gn_2_96721 Lactuca sativa HOM05D003673 ORTHO05D004764 1.4e-153 547.0 379 71.5
PSO170G5322 Papaver somniferum HOM05D003673 ORTHO05D004764 1.5e-152 543.5 435 63.2
SEGI_30126 Sequoiadendron giganteum HOM05D003673 ORTHO05D004764 2.6e-152 542.7 425 65.4
PSO210G1881 Papaver somniferum HOM05D003673 ORTHO05D004764 4.4e-152 542.0 429 62.5
PSO210G6115 Papaver somniferum HOM05D003673 ORTHO05D004764 7.5e-152 541.2 437 62.2
CARHR006180 Cardamine hirsuta HOM05D003673 ORTHO05D004764 1.6e-149 533.5 368 72.8
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis HOM05D003673 ORTHO05D004764 4.5e-149 531.9 427 63.0
Zm00001eb232960 Zea mays HOM05D003673 ORTHO05D004764 1.7e-148 530.0 417 63.5
AT1G06570 Arabidopsis thaliana HOM05D003673 ORTHO05D004764 2.2e-148 529.6 366 72.4
RcHm_v2.0_Chr2g0152141 Rosa chinensis HOM05D003673 ORTHO05D004764 2.2e-148 529.6 378 69.6
CDE02G2922 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 1.2e-146 523.9 426 65.5
Actinidia24401 Actinidia chinensis HOM05D003673 ORTHO05D004764 1.6e-146 523.5 438 63.2
Pp3c1_27020 Physcomitrium patens HOM05D003673 ORTHO05D004764 8.0e-146 521.2 428 62.6
Mapoly0126s0038 Marchantia polymorpha HOM05D003673 ORTHO05D004764 1.8e-145 520.0 423 61.2
HanXRQChr02g0055101 Helianthus annuus HOM05D003673 ORTHO05D004764 2.3e-145 519.6 415 62.2
Pp3c2_15470 Physcomitrium patens HOM05D003673 ORTHO05D004764 7.5e-144 514.6 427 62.1
Thecc.01G168800 Theobroma cacao HOM05D003673 ORTHO05D004764 4.1e-142 508.8 429 61.8
HPP92_002268 Vanilla planifolia HOM05D003673 ORTHO05D004764 2.3e-140 503.1 394 62.9
ECA233G6193 Erigeron canadensis HOM05D003673 ORTHO05D004764 1.2e-136 490.7 379 64.6
Lj8C8T1 Lonicera japonica HOM05D003673 ORTHO05D004764 1.3e-135 487.3 331 73.4
Cre09.g399030 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 4.5e-133 478.8 433 58.2
SMO358G0369 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.5e-131 473.8 445 57.3
Cre09.g398993 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 1.0e-129 467.6 432 56.7
PRCOL_00001771 Prasinoderma coloniale HOM05D003673 ORTHO05D004764 5.8e-128 461.8 429 56.6
CBR_g41741 Chara braunii HOM05D003673 ORTHO05D004764 1.7e-124 450.3 445 52.1
CBR_g46667 Chara braunii HOM05D003673 ORTHO05D004764 8.6e-124 448.0 443 52.4
CBR_g8495 Chara braunii HOM05D003673 ORTHO05D004764 1.5e-123 447.2 445 52.1
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis HOM05D003673 ORTHO05D004764 1.1e-121 441.0 422 54.5
Zm00001eb304950 Zea mays HOM05D003673 ORTHO05D004764 1.5e-120 437.2 413 53.8
Glyma.02G284600 Glycine max HOM05D003673 ORTHO05D004764 6.4e-119 431.8 346 63.0
MCO11G070 Micromonas commoda HOM05D003673 ORTHO05D004764 8.3e-119 431.4 441 52.8
Potri.005G205200 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.1e-118 431.0 431 55.0
Solyc05g041200.4 Solanum lycopersicum HOM05D003673 ORTHO05D004764 3.4e-112 409.5 308 65.9
Ah.02g114000 Amaranthus hybridus HOM05D003673 ORTHO05D004764 2.7e-109 399.8 373 55.0
Medtr5g090980 Medicago truncatula HOM05D003673 ORTHO05D004764 7.8e-109 398.3 372 56.7
SMO118G0557 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.9e-107 393.7 439 49.4
MD09G1148400 Malus domestica HOM05D003673 ORTHO05D004764 2.8e-106 389.8 385 57.1
ATR0763G164 Amborella trichopoda HOM05D003673 ORTHO05D004764 9.9e-104 381.3 276 68.5
TPR.G25540 Trifolium pratense HOM05D003673 ORTHO05D004764 3.8e-103 379.4 421 49.2
Os02g0168100 Oryza sativa ssp. japonica HOM05D003673 ORTHO05D004764 8.1e-98 361.7 225 73.8
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea HOM05D003673 ORTHO05D004764 1.0e-92 344.7 379 54.9
MD13G1156600 Malus domestica HOM05D003673 ORTHO05D004764 2.3e-92 343.6 389 48.1
Atru.chr6.2046 Acer truncatum HOM05D003673 ORTHO05D004764 6.9e-81 305.4 166 85.5
Thecc.01G169100 Theobroma cacao HOM05D003673 ORTHO05D004764 3.4e-80 303.1 249 65.5
AUR62016194 Chenopodium quinoa HOM05D003673 ORTHO05D004764 7.6e-80 302.0 308 52.9
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea HOM05D003673 ORTHO05D004764 3.0e-76 290.0 240 63.3
AUR62039301 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.4e-62 244.6 203 58.1
AUR62044533 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.4e-62 244.6 203 58.1
AUR62035118 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.7e-61 240.4 198 59.1
AUR62039293 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.7e-61 240.4 198 59.1
AUR62039297 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.7e-61 240.4 198 59.1
AUR62035117 Chenopodium quinoa HOM05D003673 ORTHO05D017143 3.1e-49 200.3 213 51.2
AUR62039294 Chenopodium quinoa HOM05D003673 ORTHO05D017143 3.1e-49 200.3 213 51.2
AUR62039298 Chenopodium quinoa HOM05D003673 ORTHO05D017143 3.1e-49 200.3 213 51.2
Cc05_g01440 Coffea canephora HOM05D003673 ORTHO05D004764 9.1e-49 198.7 107 86.0
GSVIVG01020837001 Vitis vinifera HOM05D003673 ORTHO05D004764 1.7e-47 194.5 112 80.4
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 1.4e-36 158.3 107 69.2
FvH4_5g31130 Fragaria vesca HOM05D003673 ORTHO05D004764 8.8e-36 155.6 89 80.9
FAN18G0200 Fragaria x ananassa HOM05D003673 ORTHO05D004764 9.8e-35 152.1 89 78.7
Atru.chr6.2045 Acer truncatum HOM05D003673 ORTHO05D017143 6.3e-34 149.4 106 66.0
Cfa023357 Carpinus fangiana HOM05D003673 ORTHO05D017143 4.1e-33 146.7 92 75.0
AUR62044532 Chenopodium quinoa HOM05D003673 ORTHO05D017143 5.9e-32 142.9 129 55.0
Haze_25279 Corylus avellana HOM05D003673 ORTHO05D004764 5.9e-32 142.9 162 50.0
MD05G1024200 Malus domestica HOM05D003673 ORTHO05D004764 1.7e-26 124.8 76 72.4
Dinv21956 Davidia involucrata HOM05D003673 ORTHO05D004764 3.7e-26 123.6 110 60.9
COL.COLO4_38401 Corchorus olitorius HOM05D003673 ORTHO05D004764 3.5e-24 117.1 148 47.3
ATR0763G191 Amborella trichopoda HOM05D003673 ORTHO05D017143 7.7e-24 115.9 114 53.5
COL.COLO4_20758 Corchorus olitorius HOM05D003673 ORTHO05D004764 9.5e-22 109.0 71 76.1
GSVIVG01013079001 Vitis vinifera HOM05D003673 ORTHO05D004764 6.1e-21 106.3 64 75.0
CARHR006190 Cardamine hirsuta HOM05D003673 ORTHO05D004764 3.0e-20 104.0 54 85.2
AUR62039302 Chenopodium quinoa HOM05D003673 ORTHO05D017143 4.0e-20 103.6 138 49.3
TPR.G10161 Trifolium pratense HOM05D003673 ORTHO05D004764 5.2e-20 103.2 54 83.3
COL.COLO4_19675 Corchorus olitorius HOM05D003673 ORTHO05D163473 4.3e-14 83.6 282 30.5
FAN10G3644 Fragaria x ananassa HOM05D003673 ORTHO05D025527 9.5e-14 82.4 137 38.0
Lj8C8T3 Lonicera japonica HOM05D003673 ORTHO05D004764 6.2e-13 79.7 41 85.4
FvH4_6g00910 Fragaria vesca HOM05D003673 ORTHO05D025527 1.3e-07 62.0 68 50.0
MD05G1024100 Malus domestica HOM05D003673 ORTHO05D017143 2.3e-07 61.2 46 56.5


User provided reference genes

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