Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01779 Aquilegia oxysepala HOM05D004468 ORTHO05D008180 5.9e-135 484.2 243 100.0
TAR629G0415 Trochodendron aralioides HOM05D004468 ORTHO05D008180 2.4e-59 233.0 247 54.7
Dinv05249 Davidia involucrata HOM05D004468 ORTHO05D008180 1.2e-58 230.7 245 53.9
Dinv30712 Davidia involucrata HOM05D004468 ORTHO05D008180 1.3e-57 227.3 241 52.7
QL05p059278 Quercus lobata HOM05D004468 ORTHO05D008180 4.2e-56 222.2 246 52.4
Dinv33636 Davidia involucrata HOM05D004468 ORTHO05D008180 7.2e-56 221.5 245 52.2
Ciclev10016464m.g Citrus clementina HOM05D004468 ORTHO05D008180 2.1e-55 219.9 245 51.0
Prupe.4G077100 Prunus persica HOM05D004468 ORTHO05D008180 2.1e-55 219.9 244 51.6
CiPaw.09G126600 Carya illinoinensis HOM05D004468 ORTHO05D008180 3.6e-55 219.2 240 53.3
Nn4g26508 Nelumbo nucifera HOM05D004468 ORTHO05D008180 4.7e-55 218.8 216 56.9
MD10G1264900 Malus domestica HOM05D004468 ORTHO05D008180 1.4e-54 217.2 245 50.6
Potri.011G080000 Populus trichocarpa HOM05D004468 ORTHO05D008180 5.1e-54 215.3 244 51.6
MD05G1288800 Malus domestica HOM05D004468 ORTHO05D008180 7.4e-53 211.5 245 49.0
Gorai.011G042000 Gossypium raimondii HOM05D004468 ORTHO05D008180 6.3e-52 208.4 245 49.4
Thecc.06G154000 Theobroma cacao HOM05D004468 ORTHO05D008180 6.3e-52 208.4 243 51.0
Atru.chr10.1342 Acer truncatum HOM05D004468 ORTHO05D008180 1.1e-51 207.6 248 49.6
Gohir.A10G039100 Gossypium hirsutum HOM05D004468 ORTHO05D008180 1.4e-51 207.2 245 49.8
Haze_05549 Corylus avellana HOM05D004468 ORTHO05D008180 2.4e-51 206.5 246 49.2
Manes.15G119000 Manihot esculenta HOM05D004468 ORTHO05D008180 2.4e-51 206.5 244 49.6
PSO541G2725 Papaver somniferum HOM05D004468 ORTHO05D008180 2.6e-50 203.0 249 52.6
CiPaw.10G093500 Carya illinoinensis HOM05D004468 ORTHO05D008180 1.3e-49 200.7 238 51.7
Cfa000973 Carpinus fangiana HOM05D004468 ORTHO05D008180 6.5e-49 198.4 245 48.6
PGSC0003DMG400008295 Solanum tuberosum HOM05D004468 ORTHO05D008180 1.1e-48 197.6 244 49.2
PSO675G1482 Papaver somniferum HOM05D004468 ORTHO05D008180 1.9e-48 196.8 243 52.7
Sopen02g019960 Solanum pennellii HOM05D004468 ORTHO05D008180 4.2e-48 195.7 246 48.8
Duzib235G1094 Durio zibethinus HOM05D004468 ORTHO05D008180 9.4e-48 194.5 243 47.7
COL.COLO4_06070 Corchorus olitorius HOM05D004468 ORTHO05D008180 1.6e-47 193.7 243 49.4
Duzib160G0871 Durio zibethinus HOM05D004468 ORTHO05D008180 2.7e-47 193.0 244 48.8
Solyc02g070880.1 Solanum lycopersicum HOM05D004468 ORTHO05D008180 2.7e-47 193.0 246 48.8
Duzib192G0660 Durio zibethinus HOM05D004468 ORTHO05D008180 1.4e-46 190.7 243 47.3
Gohir.A05G150000 Gossypium hirsutum HOM05D004468 ORTHO05D008180 1.8e-46 190.3 243 46.5
Nitab4.5_0001040g0150 Nicotiana tabacum HOM05D004468 ORTHO05D008180 3.0e-46 189.5 226 50.4
vmacro10945 Vaccinium macrocarpon HOM05D004468 ORTHO05D008180 3.9e-46 189.1 241 47.3
CAN.G257.6 Capsicum annuum HOM05D004468 ORTHO05D008180 1.1e-45 187.6 246 48.4
Sabra11G0068700 Salix brachista HOM05D004468 ORTHO05D008180 3.3e-45 186.0 244 48.0
Sabra11G0070800 Salix brachista HOM05D004468 ORTHO05D008180 3.3e-45 186.0 244 48.0
Peaxi162Scf00291g00015 Petunia axillaris HOM05D004468 ORTHO05D008180 4.4e-45 185.7 233 48.9
TWI53G1884 Tripterygium wilfordii HOM05D004468 ORTHO05D008180 2.2e-44 183.3 245 46.5
Gohir.D05G152600 Gossypium hirsutum HOM05D004468 ORTHO05D008180 8.2e-44 181.4 243 45.7
Gorai.009G156700 Gossypium raimondii HOM05D004468 ORTHO05D008180 1.1e-43 181.0 243 45.3
Manes.17G067600 Manihot esculenta HOM05D004468 ORTHO05D008180 1.1e-43 181.0 244 44.7
SalBow6G4733 Salvia bowleyana HOM05D004468 ORTHO05D008180 7.0e-43 178.3 193 52.3
SalBow7G0317 Salvia bowleyana HOM05D004468 ORTHO05D008180 7.0e-43 178.3 193 52.3
FvH4_3g06000 Fragaria vesca HOM05D004468 ORTHO05D008180 1.2e-42 177.6 246 44.7
FAN21G2255 Fragaria x ananassa HOM05D004468 ORTHO05D008180 2.0e-42 176.8 243 44.9
TPR.G4895 Trifolium pratense HOM05D004468 ORTHO05D008180 2.0e-42 176.8 245 46.5
FAN11G2204 Fragaria x ananassa HOM05D004468 ORTHO05D008180 5.9e-42 175.3 243 44.4
Oeu052384.1 Olea europaea HOM05D004468 ORTHO05D008180 1.0e-41 174.5 240 44.2
RhsimUnG0149400 Rhododendron simsii HOM05D004468 ORTHO05D008180 1.3e-41 174.1 245 45.3
RcHm_v2.0_Chr5g0013411 Rosa chinensis HOM05D004468 ORTHO05D008180 1.1e-40 171.0 248 44.4
FAN25G3280 Fragaria x ananassa HOM05D004468 ORTHO05D008180 1.5e-40 170.6 243 44.0
Hma1.2p1_0164F.1_g073090 Hydrangea macrophylla HOM05D004468 ORTHO05D008180 1.5e-40 170.6 249 47.4
Cc09_g09510 Coffea canephora HOM05D004468 ORTHO05D008180 7.2e-40 168.3 246 45.9
Sc17g0005060 Simmondsia chinensis HOM05D004468 ORTHO05D008180 9.4e-40 167.9 242 43.8
FAN16G0098 Fragaria x ananassa HOM05D004468 ORTHO05D008180 2.1e-39 166.8 243 43.2
Phvul.002G194400 Phaseolus vulgaris HOM05D004468 ORTHO05D008180 3.6e-39 166.0 247 44.1
Ca_18271_v3 Cicer arietinum L. HOM05D004468 ORTHO05D008180 1.4e-38 164.1 242 45.0
CsaV3_6G051560 Cucumis sativus L. HOM05D004468 ORTHO05D008180 1.8e-38 163.7 250 41.6
MSTRG.14764 Avicennia marina HOM05D004468 ORTHO05D008180 3.0e-38 162.9 247 44.5
Glyma.05G129400 Glycine max HOM05D004468 ORTHO05D008180 5.2e-38 162.2 239 43.5
arahy.Tifrunner.gnm1.ann1.2E3FWC Arachis hypogaea HOM05D004468 ORTHO05D008180 6.8e-38 161.8 229 46.7
Migut.H01376 Erythranthe guttata HOM05D004468 ORTHO05D008180 8.8e-38 161.4 235 43.8
Psat7g090880 Pisum sativum HOM05D004468 ORTHO05D008180 2.0e-37 160.2 244 42.6
MSTRG.13248 Avicennia marina HOM05D004468 ORTHO05D008180 3.4e-37 159.5 248 41.9
Medtr4g096660 Medicago truncatula HOM05D004468 ORTHO05D008180 1.3e-36 157.5 204 49.0
Hund21515 Selenicereus undatus HOM05D004468 ORTHO05D008180 1.3e-36 157.5 245 40.8
Nn3g20652 Nelumbo nucifera HOM05D004468 ORTHO05D008180 1.7e-36 157.1 167 52.1
MD05G1288000 Malus domestica HOM05D004468 ORTHO05D008180 3.1e-35 152.9 216 42.6
Sed0014650 Sechium edule HOM05D004468 ORTHO05D008180 7.0e-35 151.8 244 40.6
MD05G1288300 Malus domestica HOM05D004468 ORTHO05D008180 9.1e-35 151.4 216 42.6
THA.LOC104820641 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 2.7e-34 149.8 201 44.8
Sed0007839 Sechium edule HOM05D004468 ORTHO05D008180 3.8e-33 146.0 247 38.5
Lalb_Chr13g0291991 Lupinus albus HOM05D004468 ORTHO05D008180 5.0e-33 145.6 237 42.2
Lj4g0016525 Lotus japonicus HOM05D004468 ORTHO05D008180 8.5e-33 144.8 240 41.7
Glyma.08G084100 Glycine max HOM05D004468 ORTHO05D008180 1.1e-32 144.4 238 40.8
Gohir.D10G039900 Gossypium hirsutum HOM05D004468 ORTHO05D008180 1.5e-32 144.1 245 42.4
VMungo0251G1661 Vigna mungo HOM05D004468 ORTHO05D008180 4.2e-32 142.5 241 40.2
Nitab4.5_0001655g0240 Nicotiana tabacum HOM05D004468 ORTHO05D008180 2.1e-31 140.2 226 41.6
Lj1P1184T76 Lonicera japonica HOM05D004468 ORTHO05D008180 3.6e-31 139.4 208 43.8
Sp1g25810 Schrenkiella parvula HOM05D004468 ORTHO05D008180 2.3e-30 136.7 211 43.1
Thhalv10009888m.g Eutrema salsugineum HOM05D004468 ORTHO05D008180 4.0e-30 136.0 208 44.2
Os01g0626900 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 5.2e-30 135.6 258 40.3
CDE02G0697 Ceratophyllum demersum HOM05D004468 ORTHO05D008180 2.0e-29 133.7 246 39.8
Os02g0315600 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 2.0e-29 133.7 272 36.8
CANSAT35G0919 Cannabis sativa HOM05D004468 ORTHO05D008180 2.6e-29 133.3 247 38.1
BcaB03g13850 Brassica carinata HOM05D004468 ORTHO05D008180 3.4e-29 132.9 239 40.2
Os03g0591300 Oryza sativa ssp. japonica HOM05D004468 ORTHO05D008180 5.7e-29 132.1 216 41.7
RhsimUnG0174800 Rhododendron simsii HOM05D004468 ORTHO05D008180 1.3e-28 131.0 224 41.5
Lsat_1_v5_gn_1_96101 Lactuca sativa HOM05D004468 ORTHO05D008180 2.8e-28 129.8 196 42.3
Oeu040960.2 Olea europaea HOM05D004468 ORTHO05D008180 3.7e-28 129.4 205 42.0
AL1G43790 Arabidopsis lyrata HOM05D004468 ORTHO05D008180 4.8e-28 129.0 221 40.3
THA.LOC104812665 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 6.3e-28 128.6 198 39.9
unitig_8.g4884 Utricularia gibba HOM05D004468 ORTHO05D008180 1.1e-27 127.9 207 42.0
Actinidia39559 Actinidia chinensis HOM05D004468 ORTHO05D008180 3.1e-27 126.3 243 35.8
Dinv32278 Davidia involucrata HOM05D004468 ORTHO05D011136 5.4e-27 125.6 131 48.9
Zm00001eb384990 Zea mays HOM05D004468 ORTHO05D008180 9.1e-27 124.8 208 41.8
C07p15630 Brassica napus HOM05D004468 ORTHO05D008180 5.9e-26 122.1 205 42.0
Actinidia07680 Actinidia chinensis HOM05D004468 ORTHO05D011136 1.2e-23 114.4 217 37.8
A08p24790 Brassica napus HOM05D004468 ORTHO05D008180 2.8e-23 113.2 245 36.7
BraA08t34433Z Brassica rapa HOM05D004468 ORTHO05D008180 2.8e-23 113.2 245 36.7
C03p76270 Brassica napus HOM05D004468 ORTHO05D008180 8.0e-23 111.7 244 35.7
BolC3t19884H Brassica oleracea HOM05D004468 ORTHO05D008180 8.0e-23 111.7 244 35.7
BcaC01g00145 Brassica carinata HOM05D004468 ORTHO05D008180 1.0e-22 111.3 245 35.9
BcaC06g35475 Brassica carinata HOM05D004468 ORTHO05D008180 5.2e-22 109.0 204 38.7
BolC7t42051H Brassica oleracea HOM05D004468 ORTHO05D008180 5.2e-22 109.0 204 38.7
CARHR029490 Cardamine hirsuta HOM05D004468 ORTHO05D008180 2.0e-21 107.1 211 37.0
AT1G29950 Arabidopsis thaliana HOM05D004468 ORTHO05D008180 2.2e-20 103.6 211 36.0
THA.LOC104814285 Tarenaya hassleriana HOM05D004468 ORTHO05D008180 8.3e-20 101.7 198 35.9
BcaB03g12186 Brassica carinata HOM05D004468 ORTHO05D008180 1.4e-19 100.9 244 34.0
Carub.0001s2818 Capsella rubella HOM05D004468 ORTHO05D008180 1.2e-18 97.8 226 34.1
A07p10110 Brassica napus HOM05D004468 ORTHO05D008180 1.3e-17 94.4 234 33.8
QL05p059480 Quercus lobata HOM05D004468 ORTHO05D008180 2.3e-17 93.6 129 48.8
MELO3C007151.2 Cucumis melo HOM05D004468 ORTHO05D008180 6.6e-17 92.0 248 29.8
Lsat_1_v5_gn_7_32861 Lactuca sativa HOM05D004468 ORTHO05D008180 6.6e-17 92.0 212 35.4
Zm00001eb278170 Zea mays HOM05D004468 ORTHO05D008180 1.6e-15 87.4 213 31.9
Zm00001eb277350 Zea mays HOM05D004468 ORTHO05D008180 4.0e-14 82.8 204 32.8
MD05G1288500 Malus domestica HOM05D004468 ORTHO05D008180 3.4e-13 79.7 112 48.2
HanXRQChr04g0118301 Helianthus annuus HOM05D004468 ORTHO05D008180 5.8e-13 79.0 213 32.4
Eucgr.D00317 Eucalyptus grandis HOM05D004468 ORTHO05D008180 2.2e-12 77.0 190 28.9
BraA07t28804Z Brassica rapa HOM05D004468 ORTHO05D008180 2.9e-12 76.6 196 31.1
ECA236G0629 Erigeron canadensis HOM05D004468 ORTHO05D011136 3.5e-10 69.7 172 35.5
C07p15610 Brassica napus HOM05D004468 ORTHO05D008180 7.8e-10 68.6 125 40.8
HanXRQChr12g0382221 Helianthus annuus HOM05D004468 ORTHO05D008180 5.0e-09 65.9 111 44.1
BcaC06g35479 Brassica carinata HOM05D000171 ORTHO05D008180 1.9e-08 63.9 35 71.4
BolC7t42047H Brassica oleracea HOM05D004468 ORTHO05D008180 1.9e-08 63.9 35 71.4
Migut.L01931 Erythranthe guttata HOM05D001755 ORTHO05D001665 6.2e-07 58.9 199 27.6
BraA02t09252Z Brassica rapa HOM05D001755 ORTHO05D001665 1.1e-06 58.2 187 29.4
Oeu049222.1 Olea europaea HOM05D001755 ORTHO05D001665 1.1e-06 58.2 238 26.5
CDE08G0998 Ceratophyllum demersum HOM05D004468 ORTHO05D011136 1.4e-06 57.8 138 37.7
MELO3C024839.2 Cucumis melo HOM05D001755 ORTHO05D001665 2.3e-06 57.0 287 27.2
Manes.18G061300 Manihot esculenta HOM05D001755 ORTHO05D001665 5.2e-06 55.8 254 26.8
Lsat_1_v5_gn_1_2200 Lactuca sativa HOM05D001755 ORTHO05D001665 6.8e-06 55.5 244 26.6
SEGI_08629 Sequoiadendron giganteum HOM05D001755 ORTHO05D001665 6.8e-06 55.5 350 22.6
Sc26g0000240 Simmondsia chinensis HOM05D001755 ORTHO05D001665 6.8e-06 55.5 252 26.2
A02p43280 Brassica napus HOM05D001755 ORTHO05D001665 8.9e-06 55.1 175 29.7


User provided reference genes

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