Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 4.6e-139 499.2 244 100.0
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 2.8e-67 260.8 198 64.6
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 3.6e-67 260.4 189 67.2
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 8.0e-67 259.2 199 61.8
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 3.4e-65 253.8 171 67.8
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 7.5e-65 252.7 198 61.6
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.7e-64 251.5 231 55.0
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.9e-64 250.8 197 62.9
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 2.9e-64 250.8 217 59.9
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 3.7e-64 250.4 195 61.0
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 4.9e-64 250.0 195 61.0
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 6.4e-64 249.6 195 60.5
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.1e-63 248.8 167 68.3
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.4e-63 248.4 196 63.8
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 2.4e-63 247.7 171 66.7
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 1.2e-62 245.4 199 60.3
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 1.6e-62 245.0 196 61.2
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 4.6e-62 243.4 196 60.7
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 6.0e-62 243.0 197 60.9
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 1.7e-61 241.5 195 59.0
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 1.7e-61 241.5 196 58.7
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 3.0e-61 240.7 177 64.4
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 3.0e-61 240.7 169 67.5
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 3.0e-61 240.7 169 68.0
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 3.9e-61 240.4 191 58.6
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 3.3e-60 237.3 197 59.4
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 5.6e-60 236.5 196 59.7
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 9.5e-60 235.7 169 62.7
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 9.5e-60 235.7 203 58.1
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 1.2e-59 235.3 195 59.5
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 4.7e-59 233.4 200 55.5
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 4.7e-59 233.4 195 56.9
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 6.2e-59 233.0 163 65.6
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 8.1e-59 232.6 195 57.9
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 8.1e-59 232.6 165 65.5
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.1e-58 232.3 191 56.5
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.1e-58 232.3 176 60.8
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 1.8e-58 231.5 195 57.4
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 2.3e-58 231.1 165 64.8
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 3.1e-58 230.7 198 57.1
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 5.2e-58 229.9 170 61.8
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 6.8e-58 229.6 197 56.3
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 8.9e-58 229.2 196 57.7
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 1.2e-57 228.8 210 53.8
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.5e-57 228.4 191 55.5
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 3.4e-57 227.3 197 55.8
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 3.4e-57 227.3 193 56.0
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 9.9e-57 225.7 163 62.6
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 9.9e-57 225.7 208 53.4
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 1.7e-56 224.9 171 58.5
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.7e-56 224.9 194 56.7
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 3.7e-56 223.8 164 60.4
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 4.9e-56 223.4 224 51.3
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 4.9e-56 223.4 192 55.2
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 6.4e-56 223.0 158 62.7
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 1.1e-55 222.2 224 51.3
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 1.4e-55 221.9 215 51.2
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 1.4e-55 221.9 157 63.1
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.9e-55 221.5 171 57.9
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 2.4e-55 221.1 228 51.8
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 3.2e-55 220.7 236 49.2
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 3.2e-55 220.7 195 54.9
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 4.1e-55 220.3 196 52.0
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 4.1e-55 220.3 176 56.8
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 5.4e-55 219.9 167 59.3
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 2.1e-54 218.0 212 51.4
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 3.5e-54 217.2 194 55.2
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 4.6e-54 216.9 196 55.1
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 7.8e-54 216.1 175 57.1
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 7.8e-54 216.1 196 55.1
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 7.8e-54 216.1 184 54.3
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 1.3e-53 215.3 195 52.8
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 6.6e-53 213.0 228 47.4
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.5e-52 211.8 156 61.5
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 2.5e-52 211.1 157 57.3
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 2.8e-51 207.6 221 47.5
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.6e-51 207.2 177 52.5
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 4.7e-51 206.8 177 52.0
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 8.1e-51 206.1 164 61.0
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 3.1e-50 204.1 165 58.2
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.7e-48 198.4 136 66.2
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 2.4e-47 194.5 149 57.7
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.2e-46 192.2 130 65.4
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 1.0e-45 189.1 203 48.3
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 1.5e-44 185.3 129 62.8
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 4.7e-43 180.3 191 46.1
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 1.4e-42 178.7 160 49.4
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 2.7e-38 164.5 207 44.9
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 1.1e-36 159.1 175 44.6
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 4.8e-35 153.7 157 49.0
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 2.6e-33 147.9 130 53.8
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 1.8e-29 135.2 108 60.2
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 6.7e-29 133.3 116 52.6
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 7.6e-25 119.8 74 73.0
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 9.9e-25 119.4 129 46.5
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 3.5e-22 110.9 135 37.8
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 7.9e-22 109.8 128 39.1
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 5.1e-21 107.1 130 36.2
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 4.3e-20 104.0 139 36.7
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 4.5e-17 94.0 125 35.2
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 4.2e-15 87.4 56 67.9
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 7.9e-14 83.2 53 66.0
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 5.1e-13 80.5 43 79.1
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 1.5e-12 79.0 45 71.1
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 1.5e-12 79.0 54 61.1
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.3e-12 77.8 43 79.1
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.3e-12 77.8 43 79.1
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 1.3e-11 75.9 74 52.7
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 1.8e-10 72.0 42 78.6
MD05G1251100 Malus domestica HOM05D006866 ORTHO05D008689 1.8e-10 72.0 44 77.3
EL10Ac8g19311 Beta vulgaris HOM05D006866 ORTHO05D008689 4.5e-09 67.4 35 82.9
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 3.8e-08 64.3 47 63.8
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 5.0e-08 63.9 52 55.8
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 5.0e-08 63.9 154 33.8
Lj5g0020884 Lotus japonicus HOM05D000132 ORTHO05D000058 5.0e-08 63.9 38 76.3
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 9.4e-07 59.7 195 29.2
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 1.6e-06 58.9 41 63.4


User provided reference genes

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