Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 5.7e-156 554.3 296 100.0
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.9e-114 416.4 268 77.6
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 4.1e-114 415.2 261 79.3
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 9.2e-114 414.1 264 79.2
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 9.2e-114 414.1 263 79.8
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 1.2e-113 413.7 256 80.1
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 2.0e-113 412.9 257 81.3
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 2.7e-113 412.5 261 79.7
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 6.6e-112 407.9 266 77.1
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 6.6e-112 407.9 266 77.1
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 6.6e-112 407.9 262 78.6
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 1.5e-111 406.8 262 79.0
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 1.9e-111 406.4 261 77.8
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.9e-111 406.4 262 79.0
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.3e-111 405.6 266 76.7
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 4.3e-111 405.2 261 77.8
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 7.3e-111 404.4 264 76.9
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 1.2e-110 403.7 261 77.4
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 1.6e-110 403.3 258 79.1
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.6e-110 403.3 260 77.7
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 2.1e-110 402.9 261 78.5
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 2.1e-110 402.9 257 78.2
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 3.6e-110 402.1 261 78.2
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 4.7e-110 401.7 264 77.7
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 6.2e-110 401.4 264 76.1
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 8.1e-110 401.0 261 76.6
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 1.4e-109 400.2 259 78.4
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 4.0e-109 398.7 259 77.2
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 4.0e-109 398.7 261 77.4
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 5.2e-109 398.3 263 76.0
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 6.8e-109 397.9 276 74.6
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 8.9e-109 397.5 264 76.9
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 8.9e-109 397.5 259 76.8
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 8.9e-109 397.5 261 77.4
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 1.2e-108 397.1 265 75.1
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 1.2e-108 397.1 265 75.5
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 1.2e-108 397.1 267 76.8
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 1.5e-108 396.7 263 75.3
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 2.0e-108 396.4 257 77.8
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 2.0e-108 396.4 259 76.4
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 2.6e-108 396.0 269 77.0
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.6e-108 396.0 270 76.3
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.6e-108 396.0 269 77.0
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 3.4e-108 395.6 264 75.4
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 5.8e-108 394.8 260 76.9
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 9.8e-108 394.0 269 75.8
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 9.8e-108 394.0 269 75.8
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 9.8e-108 394.0 274 74.5
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.7e-107 393.3 259 77.6
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 2.9e-107 392.5 265 75.5
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 4.9e-107 391.7 261 75.9
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 8.3e-107 391.0 260 74.6
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 8.3e-107 391.0 266 75.9
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 3.2e-106 389.0 291 69.8
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 5.4e-106 388.3 265 74.0
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 9.2e-106 387.5 262 75.2
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 1.6e-105 386.7 264 74.6
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.6e-105 386.7 269 74.3
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 2.1e-105 386.3 263 75.3
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.1e-105 386.3 257 75.9
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 2.7e-105 386.0 268 72.8
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 1.7e-104 383.3 212 86.3
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.3e-104 382.9 261 74.7
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 2.3e-104 382.9 263 72.6
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 5.1e-104 381.7 274 72.6
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 6.6e-104 381.3 265 73.6
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 8.6e-104 380.9 262 74.0
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.1e-103 380.6 261 73.6
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 3.3e-103 379.0 256 74.6
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 4.3e-103 378.6 265 73.2
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 1.8e-101 373.2 274 67.2
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 1.8e-101 373.2 274 67.2
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 2.3e-101 372.9 269 69.9
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 4.0e-101 372.1 273 69.2
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 5.2e-101 371.7 270 70.0
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 5.2e-101 371.7 290 68.3
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 6.8e-101 371.3 274 66.4
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 6.8e-101 371.3 273 69.2
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 6.8e-101 371.3 274 66.4
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 8.9e-101 370.9 258 73.6
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 8.9e-101 370.9 272 68.8
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 1.5e-100 370.2 273 68.9
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 1.5e-100 370.2 272 69.1
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 2.0e-100 369.8 274 69.3
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 2.0e-100 369.8 269 69.9
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 3.4e-100 369.0 274 69.3
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 4.4e-100 368.6 261 72.0
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 7.6e-100 367.9 274 69.7
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 7.6e-100 367.9 248 75.0
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 9.9e-100 367.5 275 69.1
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.4e-98 363.6 270 69.6
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 1.9e-98 363.2 259 72.2
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 5.4e-98 361.7 291 65.6
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 7.1e-98 361.3 275 68.0
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 9.2e-98 360.9 254 71.3
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 3.5e-97 359.0 260 70.4
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 2.5e-95 352.8 304 62.5
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.1e-93 347.4 279 67.4
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 7.6e-92 341.3 209 76.1
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 9.9e-92 340.9 231 75.3
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 2.2e-91 339.7 268 65.7
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 1.4e-90 337.0 254 66.1
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 2.4e-90 336.3 258 66.7
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 2.1e-89 333.2 265 65.7
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 1.5e-87 327.0 255 63.5
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 2.1e-81 306.6 244 65.6
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 7.9e-81 304.7 216 74.1
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.4e-77 293.9 241 63.9
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 3.1e-77 292.7 257 63.8
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 4.2e-74 282.3 230 60.9
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 5.5e-74 282.0 256 58.6
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 7.1e-74 281.6 193 72.5
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.3e-72 276.6 175 78.9
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 3.0e-72 276.2 176 76.7
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 1.3e-70 270.8 216 65.3
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 2.8e-70 269.6 175 74.9
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 2.5e-66 256.5 175 70.9
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 4.6e-65 252.3 173 72.8
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 1.1e-61 241.1 275 46.2
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 2.2e-59 233.4 247 49.4
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 1.1e-58 231.1 220 53.6
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 1.4e-50 204.1 171 57.9
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 2.7e-49 199.9 263 47.9
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 1.2e-44 184.5 200 46.5
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 6.1e-41 172.2 179 53.1
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 2.4e-37 160.2 233 36.9
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.4e-32 144.4 88 85.2
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 2.2e-27 127.1 174 39.7
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 1.1e-26 124.8 269 32.7
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.7e-25 120.2 86 74.4
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 5.2e-24 115.9 54 100.0
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 2.8e-22 110.2 56 92.9
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 3.8e-19 99.8 52 88.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 1.7e-06 57.8 157 29.3
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 3.7e-06 56.6 191 27.7
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 6.4e-06 55.8 191 27.7
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 6.4e-06 55.8 197 26.4


User provided reference genes

Program Settings