Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy199s002 Aquilegia oxysepala HOM05D001435 ORTHO05D001304 5.9e-61 237.7 149 100.0
Aqoxy7G01333 Aquilegia oxysepala HOM05D001435 ORTHO05D001304 3.6e-42 175.3 145 84.8
Nn6g35391 Nelumbo nucifera HOM05D001435 ORTHO05D001304 4.3e-11 72.0 117 46.2
Gorai.001G023800 Gossypium raimondii HOM05D001435 ORTHO05D001304 4.8e-10 68.6 117 40.2
TAR383G0608 Trochodendron aralioides HOM05D001435 ORTHO05D001304 8.1e-10 67.8 150 54.7
Ciclev10009045m.g Citrus clementina HOM05D001435 ORTHO05D001304 1.1e-09 67.4 125 49.6
CANSAT25G0463 Cannabis sativa HOM05D001435 ORTHO05D001304 1.4e-09 67.0 129 38.8
Gohir.D07G023100 Gossypium hirsutum HOM05D001435 ORTHO05D001304 1.4e-09 67.0 117 39.3
Cfa017930 Carpinus fangiana HOM05D001435 ORTHO05D001304 1.8e-09 66.6 126 40.5
Gohir.A07G022148 Gossypium hirsutum HOM05D001435 ORTHO05D001304 1.8e-09 66.6 117 39.3
Manes.16G077700 Manihot esculenta HOM05D001435 ORTHO05D001304 4.0e-09 65.5 114 38.6
Duzib150G0044 Durio zibethinus HOM05D001435 ORTHO05D001304 5.3e-09 65.1 109 41.3
Duzib168G0652 Durio zibethinus HOM05D001435 ORTHO05D001304 5.3e-09 65.1 128 46.1
Thecc.09G050800 Theobroma cacao HOM05D001435 ORTHO05D001304 5.3e-09 65.1 114 42.1
RcHm_v2.0_Chr6g0310471 Rosa chinensis HOM05D001435 ORTHO05D001304 9.0e-09 64.3 125 39.2
Gohir.A05G044000 Gossypium hirsutum HOM05D001435 ORTHO05D001304 2.0e-08 63.2 122 40.2
Gorai.009G047000 Gossypium raimondii HOM05D001435 ORTHO05D001304 2.0e-08 63.2 122 40.2
Nn8g38956 Nelumbo nucifera HOM05D000927 ORTHO05D000850 2.0e-08 63.2 128 43.0
Manes.03G046400 Manihot esculenta HOM05D001435 ORTHO05D001304 2.6e-08 62.8 114 47.4
Actinidia01205 Actinidia chinensis HOM05D000927 ORTHO05D000850 4.5e-08 62.0 119 40.3
Prupe.1G415100 Prunus persica HOM05D001435 ORTHO05D001304 4.5e-08 62.0 124 40.3
Lj7A282T45 Lonicera japonica HOM05D001435 ORTHO05D001304 7.6e-08 61.2 133 39.1
Gohir.D05G045600 Gossypium hirsutum HOM05D001435 ORTHO05D001304 9.9e-08 60.8 122 39.3
CsaV3_4G035460 Cucumis sativus L. HOM05D001435 ORTHO05D001304 1.3e-07 60.5 118 38.1
Sc09g0009650 Simmondsia chinensis HOM05D001435 ORTHO05D001304 2.2e-07 59.7 90 40.0
Actinidia30299 Actinidia chinensis HOM05D001435 ORTHO05D001304 2.9e-07 59.3 112 40.2
Oeu057698.1 Olea europaea HOM05D001435 ORTHO05D001304 3.8e-07 58.9 105 41.0
MELO3C010764.2 Cucumis melo HOM05D001435 ORTHO05D001304 4.9e-07 58.5 141 36.2
GSVIVG01035342001 Vitis vinifera HOM05D001435 ORTHO05D001304 4.9e-07 58.5 39 71.8
PGR044G0779 Punica granatum HOM05D001435 ORTHO05D001304 1.1e-06 57.4 122 36.1
TWI34G0225 Tripterygium wilfordii HOM05D001435 ORTHO05D001304 1.1e-06 57.4 119 39.5
CSS0005800 Camellia sinensis var. sinensis HOM05D001435 ORTHO05D001304 1.4e-06 57.0 144 40.3
ClCG05G017720 Citrullus lanatus HOM05D001435 ORTHO05D001304 1.4e-06 57.0 133 33.8
Glyma.06G050600 Glycine max HOM05D001435 ORTHO05D001304 2.4e-06 56.2 123 43.1
FvH4_2g32200 Fragaria vesca HOM05D001435 ORTHO05D001304 3.2e-06 55.8 114 38.6
FAN15G3292 Fragaria x ananassa HOM05D001435 ORTHO05D001304 3.2e-06 55.8 114 38.6
FAN24G1394 Fragaria x ananassa HOM05D001435 ORTHO05D001304 3.2e-06 55.8 114 38.6
FAN27G2292 Fragaria x ananassa HOM05D001435 ORTHO05D001304 3.2e-06 55.8 114 38.6
arahy.Tifrunner.gnm1.ann1.BT0S58 Arachis hypogaea HOM05D001435 ORTHO05D001304 4.2e-06 55.5 139 37.4
arahy.Tifrunner.gnm1.ann1.R3WVNU Arachis hypogaea HOM05D001435 ORTHO05D001304 4.2e-06 55.5 139 37.4
Duzib187G1149 Durio zibethinus HOM05D001435 ORTHO05D001304 4.2e-06 55.5 133 38.3
FAN20G1683 Fragaria x ananassa HOM05D001435 ORTHO05D001304 4.2e-06 55.5 114 38.6
Glyma.04G050000 Glycine max HOM05D001435 ORTHO05D001304 4.2e-06 55.5 123 39.0
Potri.018G059200 Populus trichocarpa HOM05D001435 ORTHO05D001304 4.2e-06 55.5 126 44.4
MBI01_g16590_MAGBIO Magnolia biondii HOM05D001435 ORTHO05D001304 5.5e-06 55.1 93 40.9
Atru.chr7.2022 Acer truncatum HOM05D001435 ORTHO05D001304 7.1e-06 54.7 43 62.8
COL.COLO4_21025 Corchorus olitorius HOM05D001435 ORTHO05D001304 7.1e-06 54.7 45 62.2
Dinv27963 Davidia involucrata HOM05D001435 ORTHO05D001304 7.1e-06 54.7 159 43.4
Potri.006G233100 Populus trichocarpa HOM05D001435 ORTHO05D001304 7.1e-06 54.7 61 52.5
Sabra06G0181600 Salix brachista HOM05D001435 ORTHO05D001304 7.1e-06 54.7 40 70.0
VMungo1309G0835 Vigna mungo HOM05D001435 ORTHO05D001304 7.1e-06 54.7 137 40.9
MSTRG.11673 Avicennia marina HOM05D001435 ORTHO05D001304 9.3e-06 54.3 35 65.7
Sed0022728 Sechium edule HOM05D001435 ORTHO05D001304 9.3e-06 54.3 128 38.3


User provided reference genes

Program Settings