Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 5.5e-245 850.5 427 100.0
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.1e-157 560.5 448 67.2
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 2.0e-157 559.7 448 67.0
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 5.7e-157 558.1 449 67.3
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 1.0e-137 494.2 448 59.4
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 8.5e-137 491.1 445 58.9
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 3.2e-136 489.2 450 59.6
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 7.2e-136 488.0 440 59.1
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 1.2e-135 487.3 411 61.3
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 6.1e-135 485.0 466 58.6
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 1.0e-134 484.2 441 59.9
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 1.4e-134 483.8 448 58.3
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 1.4e-134 483.8 405 63.5
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 5.2e-134 481.9 456 58.3
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 5.2e-134 481.9 450 58.2
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 8.8e-134 481.1 442 58.4
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 1.2e-133 480.7 428 60.5
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 4.4e-133 478.8 406 62.8
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 1.3e-132 477.2 406 61.6
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 2.2e-132 476.5 406 61.6
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 2.8e-132 476.1 416 60.6
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 2.8e-132 476.1 401 60.3
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 2.8e-132 476.1 406 61.8
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 2.8e-132 476.1 445 59.3
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.7e-132 475.7 448 60.3
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 3.7e-132 475.7 435 58.6
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 6.3e-132 474.9 406 61.6
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 3.1e-131 472.6 450 58.0
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 9.1e-131 471.1 445 56.4
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 9.1e-131 471.1 436 58.5
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 2.0e-130 469.9 414 59.7
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 2.0e-130 469.9 411 59.9
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 7.7e-130 468.0 449 55.9
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 1.7e-129 466.8 424 59.7
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 3.8e-129 465.7 416 58.2
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 3.8e-129 465.7 461 56.4
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 3.8e-129 465.7 474 55.1
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 3.8e-129 465.7 406 61.1
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 3.8e-129 465.7 434 56.9
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 5.0e-129 465.3 445 56.9
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 6.6e-129 464.9 438 57.1
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 8.6e-129 464.5 428 58.2
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 8.6e-129 464.5 434 56.9
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 8.6e-129 464.5 395 61.5
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 1.1e-128 464.2 406 59.6
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 1.5e-128 463.8 434 56.5
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 1.5e-128 463.8 434 56.0
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 1.5e-128 463.8 406 59.6
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 1.9e-128 463.4 416 58.4
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 3.3e-128 462.6 439 56.5
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 3.3e-128 462.6 442 55.9
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 3.3e-128 462.6 429 57.3
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 2.8e-127 459.5 439 56.5
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 3.6e-127 459.1 457 56.0
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 3.6e-127 459.1 402 58.5
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 4.7e-127 458.8 439 56.7
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 4.7e-127 458.8 438 56.6
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 4.7e-127 458.8 490 52.0
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 8.0e-127 458.0 446 55.6
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 1.8e-126 456.8 415 58.3
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 1.8e-126 456.8 436 57.1
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 3.0e-126 456.1 415 57.8
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 3.0e-126 456.1 434 56.9
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 4.0e-126 455.7 415 59.0
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 5.2e-126 455.3 415 57.6
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 5.2e-126 455.3 439 56.3
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 6.8e-126 454.9 503 51.3
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 8.9e-126 454.5 415 57.6
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 1.2e-125 454.1 445 56.4
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 4.4e-125 452.2 415 57.3
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 3.7e-124 449.1 405 58.8
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 4.9e-124 448.7 402 58.0
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 8.3e-124 448.0 400 59.8
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 8.3e-124 448.0 402 57.7
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 4.1e-123 445.7 406 58.9
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 7.0e-123 444.9 395 59.0
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 6.6e-121 438.3 400 59.2
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 2.5e-120 436.4 462 53.7
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 3.3e-120 436.0 414 57.5
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 5.6e-120 435.3 380 60.5
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 7.3e-120 434.9 395 59.0
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 3.4e-117 426.0 426 54.7
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.2e-114 417.5 405 55.3
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 3.5e-114 416.0 345 61.7
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 5.0e-113 412.1 359 60.7
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 7.3e-112 408.3 335 62.7
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 3.6e-111 406.0 424 53.1
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 1.4e-110 404.1 437 51.9
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 6.8e-110 401.7 370 57.3
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 9.8e-109 397.9 392 54.8
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 7.0e-107 391.7 313 62.9
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 7.3e-104 381.7 335 60.9
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 6.4e-100 368.6 399 49.1
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 3.2e-99 366.3 330 57.3
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 9.2e-99 364.8 437 47.4
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 6.2e-95 352.1 405 48.1
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 2.1e-90 337.0 414 48.8
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.7e-89 334.0 429 47.6
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.4e-86 324.3 233 68.7
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 2.7e-82 310.1 352 51.1
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 1.9e-80 303.9 232 64.2
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 2.5e-80 303.5 365 46.3
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 1.5e-72 277.7 392 44.1
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 2.1e-71 273.9 415 38.6
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 8.7e-57 225.3 359 38.2
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 1.1e-40 171.8 158 55.1
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 2.4e-38 164.1 175 53.1
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 1.9e-35 154.5 175 49.7
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 2.1e-34 151.0 85 83.5
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 9.7e-32 142.1 189 46.6
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 2.4e-30 137.5 165 46.7
SEGI_28059 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.9e-20 104.0 89 59.6
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 1.2e-16 92.0 166 35.5
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 2.8e-15 87.4 85 49.4
SEGI_40123 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.0e-13 81.3 53 69.8
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 5.9e-13 79.7 50 78.0
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 6.6e-12 76.3 84 51.2
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 1.9e-11 74.7 49 73.5
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 2.3e-09 67.8 59 61.0
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 3.2e-06 57.4 51 56.9
CAN.G96.10 Capsicum annuum HOM05D002380 ORTHO05D026288 4.1e-06 57.0 40 67.5


User provided reference genes

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