Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 5.0e-57 224.2 109 100.0
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.3e-44 183.0 109 81.7
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.1e-43 177.9 109 80.7
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.6e-42 175.3 109 79.8
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 5.0e-41 171.0 109 75.2
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 6.5e-41 170.6 108 73.1
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.8e-35 152.5 108 64.8
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 2.0e-34 149.1 109 63.3
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 5.0e-33 144.4 109 60.6
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 5.0e-33 144.4 110 61.8
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 8.5e-33 143.7 109 63.3
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.1e-32 143.3 110 60.0
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.1e-32 143.3 109 62.4
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.1e-32 143.3 109 62.4
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.1e-32 143.3 109 62.4
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.5e-32 142.9 110 60.0
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 1.5e-32 142.9 109 58.7
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.5e-32 142.9 108 60.2
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.9e-32 142.5 109 59.6
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 3.2e-32 141.7 110 60.0
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 2.1e-31 139.0 110 58.2
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.6e-31 138.3 109 59.6
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 3.6e-31 138.3 109 59.6
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.6e-31 138.3 109 60.6
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.7e-31 137.9 110 62.7
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 4.7e-31 137.9 109 59.6
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 6.1e-31 137.5 109 60.6
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.0e-30 136.7 110 60.0
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.0e-30 136.7 110 60.0
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.0e-30 136.7 111 60.4
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.4e-30 136.3 110 60.9
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.4e-30 136.3 110 61.8
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.8e-30 136.0 105 59.0
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 4.0e-30 134.8 109 56.0
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 5.2e-30 134.4 107 60.7
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.2e-30 134.4 107 60.7
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 5.2e-30 134.4 113 55.8
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 6.8e-30 134.0 110 60.0
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 6.8e-30 134.0 110 58.2
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 6.8e-30 134.0 109 55.0
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 6.8e-30 134.0 110 60.0
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 8.8e-30 133.7 109 57.8
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 8.8e-30 133.7 109 57.8
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 1.2e-29 133.3 108 60.2
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.2e-29 133.3 110 60.9
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 1.2e-29 133.3 110 60.0
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 1.5e-29 132.9 109 57.8
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 1.5e-29 132.9 110 57.3
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 1.5e-29 132.9 110 59.1
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 2.0e-29 132.5 110 58.2
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 2.0e-29 132.5 109 58.7
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.6e-29 132.1 110 58.2
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.6e-29 132.1 111 58.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 3.4e-29 131.7 110 57.3
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.4e-29 131.7 110 60.0
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 3.4e-29 131.7 108 59.3
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.4e-29 131.3 109 56.0
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 4.4e-29 131.3 109 56.0
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 4.4e-29 131.3 111 59.5
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 5.7e-29 131.0 108 57.4
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 5.7e-29 131.0 111 57.7
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 7.5e-29 130.6 109 59.6
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 7.5e-29 130.6 109 56.0
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 7.5e-29 130.6 109 56.0
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 9.8e-29 130.2 110 56.4
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 9.8e-29 130.2 110 59.1
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 9.8e-29 130.2 110 57.3
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 9.8e-29 130.2 109 56.9
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.7e-28 129.4 107 60.7
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 1.7e-28 129.4 110 56.4
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.8e-28 128.6 111 56.8
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 3.7e-28 128.3 110 59.1
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 3.7e-28 128.3 110 56.4
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 3.7e-28 128.3 110 58.2
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 4.8e-28 127.9 110 54.5
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 4.8e-28 127.9 110 54.5
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 4.8e-28 127.9 107 58.9
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 6.3e-28 127.5 110 55.5
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 6.3e-28 127.5 110 53.6
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 8.3e-28 127.1 110 55.5
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 1.1e-27 126.7 109 54.1
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 1.1e-27 126.7 110 54.5
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 1.4e-27 126.3 109 52.3
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.8e-27 125.9 110 55.5
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 2.4e-27 125.6 110 55.5
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 3.1e-27 125.2 110 50.9
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 7.0e-27 124.0 111 54.1
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.0e-27 124.0 109 54.1
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 9.1e-27 123.6 110 54.5
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.6e-26 122.9 109 50.5
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 1.6e-26 122.9 106 54.7
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 3.5e-26 121.7 109 51.4
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 4.5e-26 121.3 104 53.8
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.9e-26 120.9 109 54.1
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 1.7e-25 119.4 110 51.8
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.7e-25 119.4 110 51.8
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 2.3e-25 119.0 110 51.8
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 5.0e-25 117.9 106 52.8
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 6.5e-25 117.5 110 50.9
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 6.5e-25 117.5 110 50.9
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 6.5e-25 117.5 110 50.9
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.1e-24 116.7 109 48.6
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.5e-24 116.3 108 51.9
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.9e-24 115.9 109 50.5
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.9e-24 115.9 109 51.4
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.5e-24 114.4 110 53.6
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.1e-23 112.5 109 49.5
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 2.8e-23 112.1 110 50.9
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.8e-22 107.5 110 53.6
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.2e-21 106.7 105 51.4
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.5e-21 106.3 105 45.7
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.5e-21 106.3 110 52.7
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.0e-21 105.9 110 50.9
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 3.4e-21 105.1 103 51.5
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 5.7e-21 104.4 110 50.0
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 5.7e-21 104.4 105 50.5
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 4.9e-20 101.3 105 50.5
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 8.3e-20 100.5 110 46.4
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 3.1e-19 98.6 110 50.0
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.2e-15 86.7 93 49.5
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.2e-15 86.7 105 40.0
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 6.1e-15 84.3 98 41.8
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 1.2e-13 80.1 105 39.0


User provided reference genes

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