Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 0.0e+00 1298.5 686 100.0
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.6e-236 822.4 724 66.2
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 6.4e-235 817.8 728 65.8
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 8.1e-222 774.2 706 65.0
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.6e-193 680.2 710 60.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 5.6e-138 495.7 721 49.5
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 2.7e-132 476.9 470 61.9
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.0e-131 474.9 527 56.0
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.6e-130 469.2 717 48.1
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.2e-129 468.0 460 61.3
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.3e-126 458.0 507 56.2
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 4.9e-126 456.1 720 47.5
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.1e-125 454.9 458 60.3
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 3.2e-125 453.4 549 53.6
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 5.4e-125 452.6 480 52.9
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 5.1e-123 446.0 450 61.3
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.5e-122 444.5 730 45.8
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 9.5e-122 441.8 455 59.3
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.2e-121 441.4 632 48.7
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.2e-121 441.4 510 56.5
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.8e-120 437.6 445 61.1
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 6.8e-120 435.6 566 51.1
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 1.2e-119 434.9 468 58.3
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 1.2e-119 434.9 472 56.4
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 1.5e-119 434.5 460 57.0
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.0e-119 434.1 756 44.7
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 2.0e-119 434.1 450 60.0
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 3.4e-119 433.3 464 57.5
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 7.6e-119 432.2 732 44.7
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 7.6e-119 432.2 461 58.4
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 9.9e-119 431.8 742 44.5
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 9.9e-119 431.8 444 60.6
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 1.7e-118 431.0 519 54.5
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 3.8e-118 429.9 463 57.7
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 6.4e-118 429.1 707 45.0
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 8.4e-118 428.7 450 60.7
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.1e-117 428.3 452 59.5
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 2.4e-117 427.2 532 54.3
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 9.2e-117 425.2 464 57.1
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 9.2e-117 425.2 528 52.1
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 1.2e-116 424.9 458 57.4
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.2e-116 424.9 475 57.9
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 3.5e-116 423.3 513 56.1
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 3.5e-116 423.3 619 49.9
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 4.6e-116 422.9 462 56.7
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 7.8e-116 422.2 484 53.7
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 1.3e-115 421.4 445 60.0
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 1.7e-115 421.0 744 43.7
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 3.9e-115 419.9 457 57.1
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.9e-114 417.5 532 53.9
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 2.5e-114 417.2 471 58.0
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 4.3e-114 416.4 554 51.6
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 7.3e-114 415.6 467 57.0
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 2.1e-113 414.1 456 55.9
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 2.4e-112 410.6 450 55.8
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 2.4e-112 410.6 456 55.9
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 5.8e-111 406.0 779 38.8
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.3e-110 404.8 464 56.7
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.7e-110 404.4 493 52.9
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 6.4e-110 402.5 469 55.2
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 1.4e-109 401.4 459 56.2
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 3.2e-109 400.2 492 54.3
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.2e-108 398.3 513 51.5
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.6e-108 397.9 554 52.3
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 3.5e-108 396.7 474 55.5
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 1.0e-107 395.2 456 56.6
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.6e-107 392.5 457 57.1
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 3.3e-106 390.2 458 56.1
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 2.8e-105 387.1 466 54.3
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.2e-105 386.0 453 57.0
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.8e-104 384.4 456 56.1
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 9.0e-104 382.1 465 53.1
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 2.0e-103 380.9 468 53.4
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 2.0e-103 380.9 489 50.9
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 7.6e-103 379.0 476 52.5
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 9.9e-103 378.6 464 52.8
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.2e-102 377.5 468 53.4
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 4.9e-102 376.3 476 52.9
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 4.2e-101 373.2 454 55.3
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 7.1e-101 372.5 545 49.9
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 3.5e-100 370.2 392 58.2
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 9.6e-98 362.1 469 52.0
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 8.1e-97 359.0 529 49.1
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 4.0e-96 356.7 468 51.3
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 6.9e-96 355.9 468 52.1
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.9e-93 347.8 478 50.6
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 3.2e-93 347.1 490 50.0
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 3.2e-93 347.1 420 53.8
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 3.8e-86 323.6 447 52.1
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.5e-82 311.6 503 41.6
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 5.7e-82 309.7 474 47.9
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 1.1e-77 295.4 981 32.1
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.2e-76 292.0 741 37.7
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.2e-76 292.0 741 37.7
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 1.4e-75 288.5 471 42.0
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 3.9e-75 287.0 568 40.5
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 3.9e-75 287.0 778 34.6
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 6.5e-54 216.5 257 47.9
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 2.4e-48 198.0 270 43.7
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 7.0e-48 196.4 259 46.7
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.8e-41 174.5 166 59.0
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 2.0e-39 168.3 215 46.0
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.7e-38 165.2 186 48.9
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.3e-38 164.9 579 34.2
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 7.2e-37 159.8 225 46.2
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 4.0e-35 154.1 98 77.6
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 1.8e-32 145.2 402 37.3
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 7.8e-31 139.8 82 89.0
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 7.8e-31 139.8 110 70.0
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 1.6e-28 132.1 150 50.7
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.7e-23 114.8 170 45.3
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 3.0e-22 111.3 133 48.1
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 4.3e-21 107.5 143 45.5
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.6e-20 105.5 332 38.9
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 1.1e-19 102.8 183 40.4
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 2.6e-18 98.2 173 43.4
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.3e-14 85.9 334 29.3
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 3.9e-14 84.3 322 34.2
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 6.6e-14 83.6 259 39.0
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 9.5e-13 79.7 162 37.0
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 8.1e-12 76.6 50 78.0


User provided reference genes

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