Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 0.0e+00 2149.0 1348 100.0
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 0.0e+00 1367.1 1428 61.2
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 0.0e+00 1309.7 1406 58.8
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 0.0e+00 1220.3 1371 58.0
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 5.0e-300 1035.0 1432 50.4
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 4.4e-272 942.2 1449 48.5
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 5.8e-256 888.6 1433 46.1
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 3.4e-248 862.8 1428 46.8
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 7.6e-248 861.7 1420 47.1
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 9.9e-248 861.3 1448 47.9
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 9.6e-243 844.7 1439 46.2
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 3.6e-242 842.8 1413 45.5
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 1.4e-241 840.9 1490 44.2
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 1.3e-239 834.3 1428 47.0
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.9e-238 830.5 1492 45.4
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.9e-238 830.5 1470 45.9
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 6.0e-237 825.5 1215 52.1
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 7.9e-237 825.1 1439 43.8
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 5.1e-236 822.4 1507 43.3
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 6.7e-236 822.0 1437 44.3
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 8.7e-236 821.6 1489 43.2
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 1.1e-235 821.2 1443 46.0
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.3e-235 819.7 1425 44.6
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 1.8e-233 813.9 1433 43.8
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 2.4e-233 813.5 1449 42.1
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.1e-233 813.1 1426 44.6
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 1.5e-232 810.8 1431 43.5
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 5.8e-232 808.9 1411 44.5
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 6.5e-231 805.4 1458 44.9
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 1.9e-230 803.9 1487 43.2
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 3.2e-230 803.1 1415 48.6
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 1.2e-229 801.2 1533 41.9
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.3e-228 797.7 1416 48.0
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 6.7e-228 795.4 1217 48.6
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 4.3e-227 792.7 1378 43.9
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 5.7e-227 792.3 1460 43.2
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 1.3e-226 791.2 1418 44.4
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 3.1e-225 786.6 1431 43.4
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 6.9e-225 785.4 1491 42.4
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 9.0e-225 785.0 1444 44.7
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 2.0e-224 783.9 1473 45.3
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.6e-224 783.5 1443 43.0
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 7.6e-224 781.9 1445 43.9
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 1.3e-223 781.2 1454 45.7
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 1.1e-222 778.1 1440 47.0
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 6.7e-220 768.8 1436 48.7
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 1.6e-218 764.2 1516 42.6
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 1.6e-218 764.2 1410 44.0
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 2.8e-218 763.5 1486 42.1
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 1.4e-217 761.1 1436 42.1
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 1.7e-215 754.2 1458 43.4
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 4.2e-214 749.6 1476 43.1
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 1.5e-211 741.1 1430 45.4
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 5.7e-211 739.2 1531 41.1
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 1.4e-209 734.6 1544 41.6
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 2.4e-209 733.8 1486 40.4
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 7.7e-208 728.8 1504 42.0
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 1.7e-207 727.6 1344 42.8
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 2.5e-206 723.8 1458 43.8
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 7.4e-203 712.2 1462 41.1
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 4.1e-201 706.4 1294 43.4
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 5.3e-201 706.1 1510 41.9
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 5.0e-199 699.5 1456 45.1
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 3.2e-198 696.8 1501 39.8
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 8.8e-196 688.7 1474 41.9
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 5.7e-195 686.0 1437 41.1
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 2.4e-193 680.6 1453 40.5
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 4.5e-192 676.4 714 57.4
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 6.1e-189 666.0 1461 41.2
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 1.8e-188 664.5 1424 42.7
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 1.8e-188 664.5 1539 41.1
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 2.0e-187 661.0 1449 41.5
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 2.6e-187 660.6 1430 40.8
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 4.4e-187 659.8 1460 42.3
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 7.5e-187 659.1 1466 40.9
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 6.3e-186 656.0 1452 42.6
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 8.0e-181 639.0 1225 42.4
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 2.0e-179 634.4 1665 37.1
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 2.6e-179 634.0 1461 40.1
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 4.1e-177 626.7 1437 41.7
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 5.4e-177 626.3 1439 38.6
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 1.5e-174 618.2 1451 44.2
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 1.9e-174 617.8 1410 43.2
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 6.1e-173 612.8 1422 44.0
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 6.1e-173 612.8 1422 44.0
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 1.5e-171 608.2 1408 42.1
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 2.0e-171 607.8 1409 42.3
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 4.1e-169 600.1 1395 37.7
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 1.2e-165 588.6 1454 37.6
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 3.6e-165 587.0 1376 40.5
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 1.4e-164 585.1 1433 41.1
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.9e-161 574.7 1091 40.3
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 3.2e-161 573.9 1423 36.7
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 6.4e-154 549.7 1383 39.7
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 7.6e-139 499.6 1477 34.7
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 6.2e-133 479.9 1451 35.6
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 1.8e-132 478.4 1311 43.0
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 9.9e-131 472.6 580 56.6
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 1.9e-121 441.8 1450 35.8
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.2e-120 439.1 1387 31.0
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 2.4e-116 424.9 1194 37.4
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 9.0e-116 422.9 1147 31.8
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 8.4e-114 416.4 808 41.8
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 4.3e-110 404.1 1250 32.9
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 4.3e-110 404.1 1240 35.2
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.6e-109 402.1 597 46.6
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 1.6e-96 359.0 698 43.7
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 2.3e-55 222.2 679 31.8
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 5.2e-55 221.1 1514 24.6
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 2.0e-54 219.2 807 30.7
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 2.6e-54 218.8 494 41.3
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 2.2e-53 215.7 815 32.4
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 2.9e-53 215.3 341 34.9
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 3.1e-47 195.3 198 55.6
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 1.5e-46 193.0 1462 26.9
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.1e-36 160.2 171 51.5
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 5.4e-36 157.9 403 40.2
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 8.6e-34 150.6 354 35.9
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 9.5e-33 147.1 447 41.6
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 1.2e-32 146.7 92 71.7
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 3.0e-26 125.6 130 56.9
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 6.9e-23 114.4 289 36.3
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 1.2e-22 113.6 61 90.2
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 1.2e-19 103.6 89 61.8
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.3e-18 100.1 285 48.1
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 5.1e-18 98.2 64 68.8
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.9e-17 96.3 211 37.0
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.1e-15 90.5 174 38.5
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 1.1e-15 90.5 287 31.4
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 5.3e-15 88.2 313 26.5
MBI02_g24140_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.2e-14 87.0 122 45.9
A02p33250 Brassica napus HOM05D004594 ORTHO05D005225 3.4e-14 85.5 79 55.7
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 7.6e-14 84.3 241 34.9
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 2.2e-13 82.8 61 67.2
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 1.9e-12 79.7 50 66.0
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.4e-12 79.3 50 70.0
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 7.1e-12 77.8 63 52.4
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 3.5e-11 75.5 718 24.4
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 3.0e-10 72.4 147 42.9
MBI07_g23220_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 7.4e-09 67.8 103 36.9
RcHm_v2.0_Chr3g0458311 Rosa chinensis HOM05D004594 ORTHO05D005225 6.2e-08 64.7 95 44.2
BraA02t08348Z Brassica rapa HOM05D004594 ORTHO05D005225 1.1e-07 63.9 57 54.4
QL03p068414 Quercus lobata HOM05D004594 ORTHO05D005225 1.1e-07 63.9 57 50.9
BcaB05g23630 Brassica carinata HOM05D004594 ORTHO05D005225 2.4e-07 62.8 161 35.4
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 3.1e-07 62.4 94 43.6


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