Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 1.0e-229 799.7 398 100.0
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 4.0e-205 718.0 406 88.2
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 4.1e-202 708.0 403 88.6
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 2.7e-201 705.3 404 86.9
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 5.1e-192 674.5 409 84.8
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 8.5e-155 550.8 418 68.9
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 2.6e-148 529.3 415 66.3
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 3.4e-148 528.9 415 66.3
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 3.4e-148 528.9 415 66.3
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 4.2e-146 521.9 423 66.0
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 9.4e-146 520.8 420 66.7
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 2.1e-145 519.6 416 66.3
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 2.1e-145 519.6 410 65.9
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 2.7e-145 519.2 416 66.1
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 3.6e-145 518.8 412 65.0
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 3.6e-145 518.8 415 65.5
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 3.6e-145 518.8 412 66.0
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 6.1e-145 518.1 419 66.1
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.0e-144 515.8 410 65.6
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 8.8e-144 514.2 413 64.6
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.1e-143 513.8 420 66.2
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.6e-143 512.7 410 65.4
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 5.7e-143 511.5 406 65.5
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 5.7e-143 511.5 419 65.6
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 9.7e-143 510.8 424 64.2
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.7e-142 510.0 417 65.2
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 1.7e-142 510.0 415 64.3
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.7e-142 508.8 410 64.9
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.4e-141 506.9 420 61.9
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.1e-141 505.4 415 64.8
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 5.3e-141 505.0 411 64.0
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 5.3e-141 505.0 404 63.1
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 1.2e-140 503.8 429 61.3
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 1.2e-140 503.8 417 64.3
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.5e-140 503.4 419 64.2
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 2.0e-140 503.1 416 63.2
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 2.6e-140 502.7 417 64.3
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 7.7e-140 501.1 440 62.3
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.2e-139 499.6 419 63.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.9e-139 499.2 416 63.7
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 6.5e-139 498.0 416 63.9
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 8.5e-139 497.7 412 64.3
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.9e-138 496.5 416 63.7
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 2.5e-138 496.1 416 62.3
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 2.5e-138 496.1 420 63.3
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 3.6e-137 492.3 423 62.6
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 2.3e-136 489.6 405 63.2
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 3.9e-136 488.8 409 63.3
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 2.2e-134 483.0 417 60.9
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 3.7e-134 482.3 420 61.0
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 8.2e-134 481.1 407 63.1
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 8.2e-134 481.1 410 62.0
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.1e-133 480.7 409 63.6
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.4e-133 480.3 417 61.6
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.4e-133 479.6 419 60.6
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 2.4e-133 479.6 408 62.7
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 2.4e-133 479.6 408 62.7
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 3.1e-133 479.2 413 61.3
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 4.1e-133 478.8 417 60.9
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.2e-132 477.2 410 61.5
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.6e-132 476.9 411 64.2
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.6e-132 476.9 409 62.8
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 2.0e-132 476.5 420 60.0
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 4.5e-132 475.3 417 60.9
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 4.5e-132 475.3 420 60.7
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 4.5e-132 475.3 408 62.0
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 6.5e-131 471.5 411 61.8
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 6.5e-131 471.5 408 61.0
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.5e-130 470.3 427 59.5
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 7.2e-130 468.0 417 60.0
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 9.4e-130 467.6 421 59.6
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.2e-129 467.2 421 59.9
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.2e-129 467.2 421 59.9
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.2e-129 467.2 421 59.9
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.2e-129 467.2 421 59.9
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 3.6e-129 465.7 418 60.5
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 6.1e-129 464.9 416 59.6
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 8.3e-126 454.5 394 62.4
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.1e-125 454.1 361 65.7
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 3.1e-125 452.6 378 62.4
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.0e-125 451.4 407 59.0
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 7.0e-125 451.4 404 61.9
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 9.1e-125 451.1 406 58.9
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 4.5e-124 448.7 405 60.2
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 5.0e-123 445.3 405 59.5
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 3.2e-122 442.6 408 58.6
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 2.7e-121 439.5 406 59.9
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 4.7e-121 438.7 404 60.6
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.4e-120 437.2 465 54.8
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 3.4e-119 432.6 405 59.8
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 1.7e-118 430.3 398 60.3
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.8e-117 426.8 402 58.5
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.2e-116 424.1 404 58.4
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 3.5e-116 422.5 405 58.8
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 4.4e-111 405.6 466 49.4
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 3.9e-107 392.5 400 54.8
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 4.0e-96 355.9 404 50.2
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.2e-95 354.4 255 73.3
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 5.8e-95 352.1 357 56.3
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.9e-91 339.3 256 69.1
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 1.5e-90 337.4 462 41.6
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.6e-89 334.0 399 50.6
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 1.9e-85 320.5 460 41.1
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 1.2e-84 317.8 236 71.2
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.1e-83 312.4 297 57.2
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 6.8e-80 302.0 248 64.1
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 2.1e-73 280.4 437 40.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 7.9e-60 235.3 288 50.0
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 7.9e-52 208.8 185 61.6
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 8.4e-46 188.7 182 52.7
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 4.2e-37 159.8 484 26.4
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 1.2e-36 158.3 467 30.0
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 5.1e-35 152.9 503 25.6
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 7.2e-29 132.5 136 51.5
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.3e-27 127.5 175 45.1
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 2.0e-26 124.4 191 43.5
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 2.6e-23 114.0 98 59.2
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 7.7e-23 112.5 108 54.6
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.1e-21 108.6 70 74.3
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 1.2e-12 78.6 140 41.4


User provided reference genes

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