Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.6e-104 383.3 271 100.0
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 5.0e-58 228.8 278 73.4
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 6.3e-53 211.8 279 66.7
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 7.0e-52 208.4 282 67.4
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.2e-46 191.0 279 64.2
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.2e-46 191.0 279 64.2
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.5e-46 190.7 281 64.1
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 3.4e-46 189.5 279 62.4
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 7.5e-46 188.3 283 63.6
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 5.0e-42 175.6 280 61.4
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 8.6e-42 174.9 153 69.9
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 4.7e-40 169.1 275 60.7
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.2e-40 168.7 233 68.2
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 6.8e-39 165.2 275 60.0
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.5e-38 164.1 275 61.8
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 1.5e-38 164.1 277 60.3
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 2.0e-38 163.7 276 61.6
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 2.0e-38 163.7 278 62.9
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 7.5e-38 161.8 277 51.6
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 9.8e-38 161.4 282 58.9
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 1.3e-37 161.0 281 58.7
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 1.3e-37 161.0 282 60.3
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 2.9e-37 159.8 282 60.6
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 4.9e-37 159.1 280 59.3
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.4e-37 158.7 280 59.6
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 8.3e-37 158.3 290 58.3
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 3.2e-36 156.4 237 67.5
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 2.1e-35 153.7 276 59.8
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 2.7e-35 153.3 238 64.7
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.5e-35 152.9 276 59.1
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 3.5e-35 152.9 282 57.8
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 6.0e-35 152.1 285 60.4
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 3.0e-34 149.8 281 58.0
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 1.9e-33 147.1 280 60.0
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 2.5e-33 146.7 274 58.4
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 7.3e-33 145.2 277 58.8
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.2e-32 144.4 286 60.1
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 1.2e-32 144.4 273 58.6
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.6e-32 144.1 282 59.2
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.1e-32 143.7 275 57.8
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 3.6e-32 142.9 277 55.6
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 8.1e-32 141.7 273 38.1
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 8.1e-32 141.7 274 58.0
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 1.4e-31 141.0 274 58.4
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.5e-30 137.5 300 53.3
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 3.4e-30 136.3 277 57.0
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 5.8e-30 135.6 283 56.2
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 7.5e-30 135.2 246 63.4
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 7.5e-30 135.2 285 55.8
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 6.4e-29 132.1 274 57.7
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.1e-28 131.3 274 55.1
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 2.7e-27 126.7 271 55.0
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 3.5e-27 126.3 113 62.8
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.0e-26 124.8 291 56.0
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.7e-26 124.0 309 41.7
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 2.3e-26 123.6 279 56.3
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 3.0e-26 123.2 282 54.6
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 3.9e-26 122.9 286 57.3
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 5.1e-26 122.5 280 54.6
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 8.6e-26 121.7 276 56.5
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.5e-25 120.9 273 56.0
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 2.5e-25 120.2 279 54.8
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 3.3e-25 119.8 149 55.0
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 3.3e-25 119.8 273 53.5
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 3.3e-25 119.8 247 42.1
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 5.6e-25 119.0 270 54.4
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 7.3e-25 118.6 282 51.8
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 9.5e-25 118.2 296 54.7
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.1e-24 117.1 273 54.2
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 2.8e-24 116.7 241 52.7
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 1.4e-23 114.4 274 57.3
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.4e-23 113.6 153 53.6
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 2.4e-23 113.6 102 58.8
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 4.0e-23 112.8 289 53.3
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 4.0e-23 112.8 283 50.5
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 5.2e-23 112.5 128 53.1
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 2.6e-22 110.2 273 50.2
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 3.4e-22 109.8 288 52.4
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 1.7e-21 107.5 277 53.8
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 3.8e-21 106.3 285 52.3
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 4.9e-21 105.9 327 45.9
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 6.4e-21 105.5 247 56.3
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 8.4e-21 105.1 97 59.8
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 8.4e-21 105.1 97 59.8
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 4.2e-20 102.8 275 49.1
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 4.6e-19 99.4 268 53.7
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 4.6e-19 99.4 323 40.9
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 7.8e-19 98.6 268 56.0
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 1.7e-18 97.4 281 51.2
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 3.0e-18 96.7 268 54.9
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 5.1e-18 95.9 294 47.6
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 6.6e-18 95.5 150 50.0
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 8.7e-18 95.1 283 52.7
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 2.5e-17 93.6 140 42.9
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 4.3e-17 92.8 277 53.4
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 7.3e-17 92.0 283 52.3
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 1.7e-13 80.9 101 49.5
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.2e-11 74.7 275 34.2
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 6.0e-11 72.4 302 46.4
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 1.3e-10 71.2 110 45.5
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 2.8e-08 63.5 141 66.7
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 1.5e-06 57.8 146 31.5


User provided reference genes

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