Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g067880 Amaranthus hybridus HOM05D000715 ORTHO05D062004 5.3e-22 106.7 50 100.0
Sc04g0002690 Simmondsia chinensis HOM05D000715 ORTHO05D000024 5.7e-08 60.1 63 57.1
Nitab4.5_0001128g0070 Nicotiana tabacum HOM05D000715 ORTHO05D000024 9.7e-08 59.3 63 54.0
Ah.02g113610 Amaranthus hybridus HOM05D000715 ORTHO05D000024 1.3e-07 58.9 63 57.1
Ah.11g048340 Amaranthus hybridus HOM05D000715 ORTHO05D000024 1.3e-07 58.9 63 57.1
EL10Ac5g11029 Beta vulgaris HOM05D000715 ORTHO05D000024 1.3e-07 58.9 63 57.1
AUR62008425 Chenopodium quinoa HOM05D000715 ORTHO05D000024 1.3e-07 58.9 63 57.1
AUR62021670 Chenopodium quinoa HOM05D000715 ORTHO05D000024 1.3e-07 58.9 63 57.1
CAN.G837.27 Capsicum annuum HOM05D000715 ORTHO05D000024 1.7e-07 58.5 63 52.4
Sed0011956 Sechium edule HOM05D000715 ORTHO05D000024 1.7e-07 58.5 63 54.0
Hund02642 Selenicereus undatus HOM05D000715 ORTHO05D000024 1.7e-07 58.5 63 55.6
Nitab4.5_0000121g0140 Nicotiana tabacum HOM05D000715 ORTHO05D000024 3.7e-07 57.4 63 52.4
Oeu047289.1 Olea europaea HOM05D000715 ORTHO05D000024 3.7e-07 57.4 63 52.4
Dinv38720 Davidia involucrata HOM05D000715 ORTHO05D000024 4.8e-07 57.0 63 50.8
Nitab4.5_0011320g0010 Nicotiana tabacum HOM05D000715 ORTHO05D000024 4.8e-07 57.0 63 52.4
PGSC0003DMG400019528 Solanum tuberosum HOM05D000715 ORTHO05D000024 6.3e-07 56.6 63 50.8
MD14G1201600 Malus domestica HOM05D000715 ORTHO05D000024 8.2e-07 56.2 63 50.8
Oeu002092.1 Olea europaea HOM05D000715 ORTHO05D000024 8.2e-07 56.2 63 50.8
Peaxi162Scf00274g00447 Petunia axillaris HOM05D000715 ORTHO05D000024 8.2e-07 56.2 63 50.8
QL03p068694 Quercus lobata HOM05D000715 ORTHO05D000024 1.1e-06 55.8 60 51.7
Gohir.A11G070000 Gossypium hirsutum HOM05D000715 ORTHO05D000024 1.4e-06 55.5 63 52.4
Gohir.D11G073900 Gossypium hirsutum HOM05D000715 ORTHO05D000024 1.4e-06 55.5 63 52.4
Gorai.007G079300 Gossypium raimondii HOM05D000715 ORTHO05D000024 1.4e-06 55.5 63 52.4
Aqoxy3G03423 Aquilegia oxysepala HOM05D000715 ORTHO05D000024 1.8e-06 55.1 63 52.4
Cc04_g16510 Coffea canephora HOM05D000715 ORTHO05D000024 1.8e-06 55.1 63 52.4
Solyc03g115940.4 Solanum lycopersicum HOM05D000715 ORTHO05D000024 1.8e-06 55.1 63 50.8
Sopen03g034940 Solanum pennellii HOM05D000715 ORTHO05D000024 1.8e-06 55.1 63 50.8
TWI15G1180 Tripterygium wilfordii HOM05D000715 ORTHO05D000024 1.8e-06 55.1 63 50.8
GSVIVG01011433001 Vitis vinifera HOM05D000715 ORTHO05D000024 1.8e-06 55.1 63 50.8
Actinidia37623 Actinidia chinensis HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 47.6
CSS0026500 Camellia sinensis var. sinensis HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 50.8
MELO3C009859.2 Cucumis melo HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 52.4
CsaV3_3G041310 Cucumis sativus L. HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 52.4
Dinv11522 Davidia involucrata HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 52.4
Lj5A110T126 Lonicera japonica HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 52.4
MD06G1194500 Malus domestica HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 49.2
Nitab4.5_0005170g0040 Nicotiana tabacum HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 50.8
QL02p082478 Quercus lobata HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 52.4
TWI81G0986 Tripterygium wilfordii HOM05D000715 ORTHO05D000024 2.4e-06 54.7 63 50.8
Cfa008968 Carpinus fangiana HOM05D000715 ORTHO05D000024 3.1e-06 54.3 57 54.4
Haze_07317 Corylus avellana HOM05D000715 ORTHO05D000024 3.1e-06 54.3 63 49.2
Dinv16658 Davidia involucrata HOM05D000715 ORTHO05D000024 3.1e-06 54.3 64 50.0
Prupe.5G194600 Prunus persica HOM05D000715 ORTHO05D000024 3.1e-06 54.3 63 49.2
TAR371G0559 Trochodendron aralioides HOM05D000715 ORTHO05D000024 3.1e-06 54.3 63 50.8
Actinidia38770 Actinidia chinensis HOM05D000715 ORTHO05D000024 4.1e-06 53.9 63 50.8
Actinidia38790 Actinidia chinensis HOM05D000715 ORTHO05D000024 4.1e-06 53.9 63 50.8
QL10p017159 Quercus lobata HOM05D000715 ORTHO05D000024 4.1e-06 53.9 63 49.2
Ciclev10019949m.g Citrus clementina HOM05D000715 ORTHO05D000024 5.3e-06 53.5 63 49.2
COL.COLO4_08435 Corchorus olitorius HOM05D000715 ORTHO05D000024 5.3e-06 53.5 63 49.2
DCAR_031013 Daucus carota HOM05D000715 ORTHO05D000024 5.3e-06 53.5 62 51.6
Dinv33771 Davidia involucrata HOM05D000715 ORTHO05D000024 5.3e-06 53.5 63 50.8
CiPaw.11G045500 Carya illinoinensis HOM05D000715 ORTHO05D000024 7.0e-06 53.1 63 49.2
Gohir.A12G178100 Gossypium hirsutum HOM05D000715 ORTHO05D000024 7.0e-06 53.1 63 49.2
Gorai.008G193700 Gossypium raimondii HOM05D000715 ORTHO05D000024 7.0e-06 53.1 63 49.2
Lju41C11G7 Lonicera japonica HOM05D000715 ORTHO05D000024 7.0e-06 53.1 60 51.7
Manes.14G079000 Manihot esculenta HOM05D000715 ORTHO05D000024 7.0e-06 53.1 63 49.2
Actinidia04884 Actinidia chinensis HOM05D000715 ORTHO05D000024 9.1e-06 52.8 63 46.0
CSS0040871 Camellia sinensis var. sinensis HOM05D000715 ORTHO05D000024 9.1e-06 52.8 63 50.8
CSS0048616 Camellia sinensis var. sinensis HOM05D000715 ORTHO05D000024 9.1e-06 52.8 63 50.8
Cfa007571 Carpinus fangiana HOM05D000715 ORTHO05D000024 9.1e-06 52.8 63 50.8
Cfa018933 Carpinus fangiana HOM05D000715 ORTHO05D000024 9.1e-06 52.8 63 47.6
CiPaw.06G086300 Carya illinoinensis HOM05D000715 ORTHO05D000024 9.1e-06 52.8 57 52.6
Ciclev10011556m.g Citrus clementina HOM05D000715 ORTHO05D000024 9.1e-06 52.8 63 50.8
Haze_14515 Corylus avellana HOM05D000715 ORTHO05D000024 9.1e-06 52.8 63 50.8
GSVIVG01019969001 Vitis vinifera HOM05D000715 ORTHO05D000024 9.1e-06 52.8 61 50.8


User provided reference genes

Program Settings