Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 9.6e-234 813.1 418 100.0
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 1.0e-134 484.2 443 61.9
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 1.1e-112 411.0 374 57.8
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 3.8e-105 386.0 388 53.4
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 4.3e-101 372.5 381 51.4
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 4.8e-100 369.0 400 53.2
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.1e-99 367.9 382 52.9
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 5.9e-98 362.1 383 50.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.6e-95 354.0 374 51.9
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 6.7e-94 348.6 398 48.2
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 1.5e-93 347.4 425 45.6
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 2.8e-92 343.2 369 49.6
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 6.3e-92 342.0 376 50.5
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 8.2e-92 341.7 376 47.9
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 5.9e-90 335.5 385 48.8
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 6.5e-89 332.0 378 47.9
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 6.5e-89 332.0 381 47.2
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 6.5e-89 332.0 380 47.6
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 1.1e-88 331.3 355 48.7
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 1.4e-88 330.9 375 47.2
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 2.7e-87 326.6 380 47.9
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 3.6e-87 326.2 377 45.1
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 2.3e-86 323.6 384 45.8
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 3.0e-86 323.2 381 44.4
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.1e-85 321.2 229 71.2
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 1.1e-85 321.2 348 48.9
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 1.1e-85 321.2 380 46.3
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 1.5e-85 320.9 388 48.2
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 2.8e-84 316.6 413 45.3
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 4.8e-84 315.8 229 70.7
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 1.1e-83 314.7 369 45.5
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 1.4e-83 314.3 348 50.0
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 3.1e-83 313.2 382 44.5
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 5.3e-83 312.4 382 46.6
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.4e-82 309.7 380 46.3
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 7.7e-82 308.5 348 48.6
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.7e-81 307.4 379 44.9
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 6.5e-81 305.4 367 44.1
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 6.5e-81 305.4 382 46.6
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 5.5e-80 302.4 379 45.1
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 1.2e-79 301.2 379 45.4
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 6.1e-79 298.9 431 40.8
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 8.0e-79 298.5 375 46.1
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.8e-78 297.4 372 44.4
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 8.8e-78 295.0 376 45.2
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.5e-77 294.3 367 45.5
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.5e-77 294.3 379 43.5
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.3e-77 293.1 367 45.2
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 3.7e-76 289.7 264 57.6
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 4.8e-76 289.3 351 45.0
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.1e-75 288.1 382 42.4
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 3.1e-75 286.6 379 42.5
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 4.1e-75 286.2 336 48.2
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.6e-74 284.3 377 44.0
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.0e-74 283.9 319 48.3
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 3.5e-74 283.1 377 39.8
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 1.7e-73 280.8 385 43.1
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 8.5e-73 278.5 325 46.8
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 1.1e-72 278.1 376 42.6
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 1.9e-72 277.3 393 42.0
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 4.2e-72 276.2 363 39.9
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 9.4e-72 275.0 222 64.0
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.2e-71 274.6 384 41.7
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 3.0e-70 270.0 364 42.3
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 3.0e-70 270.0 361 42.7
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.5e-69 267.7 343 40.8
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 7.5e-69 265.4 536 33.2
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 1.3e-68 264.6 333 42.6
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 2.8e-68 263.5 359 41.2
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 3.7e-68 263.1 359 40.9
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 8.2e-68 261.9 362 40.1
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.1e-67 261.5 362 40.6
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 1.4e-67 261.2 359 41.5
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 3.1e-67 260.0 359 40.9
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 3.1e-67 260.0 359 41.2
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 7.0e-67 258.8 375 40.8
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 2.0e-66 257.3 383 41.0
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 4.5e-66 256.1 316 47.8
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 9.4e-64 248.4 321 43.6
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 1.2e-63 248.1 273 48.7
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 3.0e-62 243.4 298 46.3
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 3.4e-61 240.0 382 40.8
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 6.3e-60 235.7 328 43.3
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 5.4e-59 232.6 291 46.4
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.5e-56 223.8 261 47.1
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.6e-55 221.1 229 50.2
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 6.1e-55 219.2 402 37.1
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 4.0e-54 216.5 238 48.7
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 9.2e-51 205.3 252 44.8
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 5.9e-50 202.6 234 48.3
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 7.8e-50 202.2 369 36.3
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 1.0e-46 191.8 237 44.3
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 5.8e-45 186.0 402 35.3
AUR62028613 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.8e-45 185.3 109 86.2
AUR62032338 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.7e-44 184.5 116 80.2
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 9.2e-43 178.7 227 43.2
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 2.3e-30 137.5 217 38.2
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 4.6e-26 123.2 202 38.6
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 2.3e-25 120.9 265 32.5
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 6.6e-25 119.4 189 36.5
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 5.6e-24 116.3 214 34.6
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 3.5e-18 97.1 184 32.1
SMO365G0010 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 7.8e-18 95.9 159 34.6
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 5.1e-17 93.2 171 31.0
Psat4g112600 Pisum sativum HOM05D006967 ORTHO05D008692 7.3e-16 89.4 149 40.3
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 1.1e-14 85.5 141 36.9
Migut.D00002 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.8e-14 84.7 115 40.9
Psat6g225040 Pisum sativum HOM05D006967 ORTHO05D008692 4.9e-12 76.6 89 42.7
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 1.4e-11 75.1 93 43.0
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 2.4e-11 74.3 124 33.9
PGSC0003DMG401016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 2.7e-10 70.9 252 29.0
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 4.8e-07 60.1 47 59.6


User provided reference genes

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