Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g049490 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-35 152.5 76 100.0
Ah.03g137130 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.4e-34 147.1 75 97.3
Ah.08g211310 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.4e-34 147.1 75 97.3
Ah.11g043910 Amaranthus hybridus HOM05D000002 ORTHO05D000001 5.4e-34 147.1 75 97.3
Ah.06g183900 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.7e-33 144.8 75 96.0
Ah.12g055400 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.7e-33 144.8 75 96.0
Ah.13g069460 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.7e-33 144.8 75 96.0
Ah.10g036840 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.0e-33 143.7 75 94.7
AUR62037585 Chenopodium quinoa HOM05D000002 ORTHO05D000001 4.0e-29 131.0 75 85.3
TPR.G18411 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-26 122.5 75 84.0
Ah.02g122090 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-24 115.9 75 78.7
EL10Ac9g22642 Beta vulgaris HOM05D000002 ORTHO05D000001 1.1e-18 96.3 65 76.9
SEGI_30649 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.0e-12 75.5 63 50.8
Sopen01g011330 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-11 71.2 63 58.7
Sopen10g024360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-11 70.9 63 57.1
Sopen10g022510 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-11 70.5 63 57.1
Sopen10g023500 Solanum pennellii HOM05D000002 ORTHO05D000001 6.4e-11 70.5 63 57.1
Sopen08g017400 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-10 68.9 63 57.1
Sopen01g007390 Solanum pennellii HOM05D000004 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen01g028280 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen01g028760 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen02g014940 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen02g015640 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen04g006060 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen04g027340 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen05g028580 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen06g003350 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen06g004200 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen06g004530 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen06g011320 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen06g015850 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen06g022150 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen06g024630 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen08g004660 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen09g006820 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen09g007410 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen09g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen09g011980 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen09g032750 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen11g019960 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen12g004240 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
Sopen12g019380 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-10 68.2 63 55.6
SEGI_20490 Sequoiadendron giganteum HOM05D000595 ORTHO05D000001 5.4e-10 67.4 66 53.0
Sopen03g023600 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-10 67.0 59 55.9
Sopen04g031680 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-10 67.0 63 55.6
Sopen06g016770 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-10 67.0 63 55.6
Sopen05g019080 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-10 66.6 63 54.0
Sopen06g032140 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-10 66.6 63 55.6
Sopen10g024060 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-10 66.6 63 54.0
Sopen10g024120 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-10 66.6 63 54.0
Ca_20010_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-09 66.2 65 49.2
Sopen08g020030 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-09 66.2 63 55.6
Sopen12g025240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-09 66.2 63 54.0
Lalb_Chr04g0254181 Lupinus albus HOM05D000002 ORTHO05D000001 1.6e-09 65.9 65 49.2
Ca_23974_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.1e-09 65.5 63 49.2
Sopen01g028950 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-09 65.5 63 54.0
Solyc08g061847.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.7e-09 65.1 63 54.0
Sopen03g009200 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-09 64.7 63 54.0
Sopen11g018860 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-09 64.7 63 54.0
Ca_04609_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_05165_v3 Cicer arietinum L. HOM05D000130 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_05211_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_06193_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_11614_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_17825_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_23427_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_25466_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.6e-09 64.3 65 47.7
Ca_20652_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.0e-09 63.9 63 47.6
Ca_27850_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.0e-09 63.9 63 47.6
Sopen12g019360 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-09 63.9 61 52.5
Ca_02050_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 7.8e-09 63.5 65 47.7
SEGI_30221 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.8e-09 63.5 66 48.5
Ca_14914_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.0e-08 63.2 63 47.6
Lalb_Chr08g0237561 Lupinus albus HOM05D000002 ORTHO05D000001 1.7e-08 62.4 65 44.6
Sopen09g006870 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-08 62.4 63 54.0
Ca_09777_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.3e-08 62.0 65 46.2
CAN.G1271.17 Capsicum annuum HOM05D005472 ORTHO05D005897 3.0e-08 61.6 63 47.6
Ca_05886_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.0e-08 61.6 68 44.1
TAR416G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.0e-08 61.6 64 43.8
Ca_14017_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.9e-08 61.2 65 46.2
Lalb_Chr13g0294661 Lupinus albus HOM05D000002 ORTHO05D000001 3.9e-08 61.2 65 44.6
SEGI_13374 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.6e-08 60.5 61 52.5
Ca_04835_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.7e-08 60.1 63 46.0
VMungo0331G0292 Vigna mungo HOM05D000002 ORTHO05D000001 1.1e-07 59.7 63 44.4
AUR62041379 Chenopodium quinoa HOM05D004229 ORTHO05D000001 1.5e-07 59.3 44 72.7
Ca_13642_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.5e-07 59.3 65 46.2
Ca_20284_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.5e-07 59.3 65 46.2
Ca_22465_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-07 58.9 63 46.0
Ca_26885_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.9e-07 58.9 61 45.9
ECA232G1160 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 58.9 63 44.4
ECA247G1961 Erigeron canadensis HOM05D014713 ORTHO05D000001 1.9e-07 58.9 63 44.4
VMungo0331G1047 Vigna mungo HOM05D008963 ORTHO05D000001 2.5e-07 58.5 63 42.9
VMungo0331G1957 Vigna mungo HOM05D000002 ORTHO05D000001 2.5e-07 58.5 63 42.9
FvH4_2g00141 Fragaria vesca HOM05D000002 ORTHO05D000001 3.3e-07 58.2 60 46.7
FvH4_2g22612 Fragaria vesca HOM05D000002 ORTHO05D000001 3.3e-07 58.2 60 46.7
Ca_23725_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.3e-07 57.8 63 44.4
Ca_26751_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 5.6e-07 57.4 69 43.5
TAR470G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.6e-07 57.4 65 38.5
ECA232G3276 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-07 57.0 64 43.8
ECA233G3422 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-07 57.0 63 42.9
Medtr6g045657 Medicago truncatula HOM05D008963 ORTHO05D000001 9.6e-07 56.6 63 42.9
Thecc.09G331600 Theobroma cacao HOM05D000002 ORTHO05D000001 9.6e-07 56.6 63 46.0
VMungo1127G0874 Vigna mungo HOM05D000002 ORTHO05D000001 9.6e-07 56.6 63 42.9
Ca_09776_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-06 56.2 65 44.6
Ca_11683_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-06 56.2 63 44.4
HanXRQChr04g0128481 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-06 56.2 63 42.9
SHI11872 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 64 46.9
SHI17839 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 64 46.9
SHI23957 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 64 46.9
SHI31976 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 63 47.6
SHI36052 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 64 46.9
SHI49193 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.2 64 46.9
Ca_12465_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001172 1.6e-06 55.8 61 44.3
SHI01873 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 55.8 64 46.9
SHI05510 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 55.8 64 46.9
SHI09338 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 55.8 64 46.9
SHI48676 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 55.8 74 41.9
Sopen10g012230 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-06 55.8 63 47.6
VMungo0331G0577 Vigna mungo HOM05D000092 ORTHO05D000042 1.6e-06 55.8 63 41.3
VMungo0464G0123 Vigna mungo HOM05D000002 ORTHO05D000001 1.6e-06 55.8 63 41.3
FvH4_5g20321 Fragaria vesca HOM05D000002 ORTHO05D000001 2.1e-06 55.5 66 37.9
SHI48685 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.5 74 41.9
Ca_02804_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.8e-06 55.1 63 42.9
Ca_11567_v3 Cicer arietinum L. HOM05D001588 ORTHO05D002975 2.8e-06 55.1 61 42.6
SHI12812 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.1 74 44.6
Sed0025010 Sechium edule HOM05D000002 ORTHO05D000001 2.8e-06 55.1 87 34.5
Atru.chr4.123 Acer truncatum HOM05D000002 ORTHO05D000001 3.6e-06 54.7 85 35.3
Ca_24010_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.6e-06 54.7 62 40.3
SHI28009 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 54.7 74 40.5
TAR710G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.6e-06 54.7 65 36.9
RcHm_v2.0_Chr2g0143411 Rosa chinensis HOM05D000002 ORTHO05D000001 4.7e-06 54.3 63 38.1
RcHm_v2.0_Chr3g0448581 Rosa chinensis HOM05D000015 ORTHO05D000734 4.7e-06 54.3 69 34.8
SHI01262 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI11200 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI12432 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 46.9
SHI24432 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI31804 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI46096 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI51062 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI51704 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI54434 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI54722 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI54774 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI54806 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI54894 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI54931 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SHI55081 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 45.3
SEGI_04823 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.7e-06 54.3 71 40.8
TAR540G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.7e-06 54.3 64 39.1
Atru.chr10.707 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-06 53.9 82 37.8
Atru.chr3.3068 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-06 53.9 85 37.6
CAN.G514.8 Capsicum annuum HOM05D000002 ORTHO05D000001 6.2e-06 53.9 80 36.2
Ca_19765_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-06 53.9 63 42.9
Ca_20532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.2e-06 53.9 63 42.9
ClCG09G015430 Citrullus lanatus HOM05D000002 ORTHO05D000001 6.2e-06 53.9 63 46.0
ECA233G2146 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-06 53.9 63 36.5
ECA248G1267 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-06 53.9 63 36.5
SHI12004 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 53.9 64 45.3
Ca_20408_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 8.1e-06 53.5 63 42.9


User provided reference genes

Program Settings