Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 3.7e-117 424.9 209 100.0
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 6.3e-77 291.2 255 60.8
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 4.1e-76 288.5 231 62.8
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 1.4e-60 236.9 221 55.7
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 2.4e-60 236.1 249 52.2
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 3.5e-59 232.3 211 56.4
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 3.5e-59 232.3 236 49.6
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 1.3e-58 230.3 216 55.1
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.3e-58 230.3 221 52.5
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.3e-58 229.6 220 51.8
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 5.1e-58 228.4 238 52.5
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 1.9e-57 226.5 252 48.8
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.5e-57 226.1 213 53.1
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 2.5e-57 226.1 211 52.6
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 3.3e-57 225.7 200 56.5
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 4.3e-57 225.3 221 53.4
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 5.6e-57 224.9 221 52.9
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 5.6e-57 224.9 207 55.1
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.2e-56 223.8 228 52.6
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 2.1e-56 223.0 244 45.9
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 2.8e-56 222.6 218 53.2
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 3.6e-56 222.2 218 54.1
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 3.6e-56 222.2 239 48.5
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 6.2e-56 221.5 217 52.1
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 1.1e-55 220.7 130 79.2
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 1.1e-55 220.7 225 51.6
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.1e-55 220.7 204 53.4
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 1.4e-55 220.3 217 49.8
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 1.8e-55 219.9 213 52.6
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.0e-55 218.8 241 48.5
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 5.2e-55 218.4 223 51.1
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 8.9e-55 217.6 217 54.8
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.2e-54 217.2 226 51.3
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.5e-54 216.9 201 55.2
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 2.0e-54 216.5 217 50.2
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 3.4e-54 215.7 240 49.6
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 3.4e-54 215.7 212 53.3
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 4.4e-54 215.3 231 51.5
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 5.8e-54 214.9 228 49.6
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 5.8e-54 214.9 220 53.6
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 5.8e-54 214.9 213 52.6
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 9.9e-54 214.2 216 52.3
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 1.3e-53 213.8 239 49.0
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.7e-53 213.4 207 53.6
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 1.7e-53 213.4 207 53.6
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 2.9e-53 212.6 219 53.0
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 2.9e-53 212.6 217 50.2
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 2.9e-53 212.6 223 50.7
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 6.4e-53 211.5 200 52.5
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 6.4e-53 211.5 211 50.2
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 1.1e-52 210.7 209 51.7
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.1e-52 210.7 219 49.8
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 1.4e-52 210.3 209 51.2
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 1.4e-52 210.3 215 48.8
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 1.9e-52 209.9 240 49.2
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.9e-52 209.9 220 50.0
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 4.1e-52 208.8 236 49.6
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.6e-51 206.8 223 48.4
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 2.1e-51 206.5 194 56.7
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 6.0e-51 204.9 227 47.6
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 7.8e-51 204.5 193 54.4
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.0e-50 204.1 195 56.9
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 1.3e-50 203.8 248 46.0
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 6.6e-50 201.4 192 55.2
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 6.6e-50 201.4 224 46.9
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 7.3e-49 198.0 215 48.8
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 8.1e-48 194.5 215 48.8
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 1.2e-46 190.7 199 51.8
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 9.9e-46 187.6 160 58.1
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 2.9e-45 186.0 123 69.9
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 6.4e-45 184.9 206 44.7
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 7.8e-43 177.9 206 46.1
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.0e-42 177.6 204 48.5
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 6.6e-42 174.9 213 46.0
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.3e-41 172.6 189 50.3
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 1.4e-39 167.2 192 43.2
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 2.6e-38 162.9 204 41.7
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.9e-36 156.8 203 39.4
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 1.2e-35 154.1 106 63.2
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 3.9e-34 149.1 188 42.6
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.1e-33 147.5 209 45.0
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 9.6e-33 144.4 197 43.1
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.3e-29 134.0 80 72.5
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.7e-27 126.3 79 68.4
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 6.7e-26 121.7 119 48.7
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.4e-23 114.0 201 37.8
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 3.4e-22 109.4 175 36.0
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.7e-19 99.8 135 43.7
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 1.6e-08 63.9 105 40.0
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.2e-08 63.5 48 64.6
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 2.2e-08 63.5 49 59.2
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 1.2e-06 57.8 48 60.4
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.5e-06 57.4 55 52.7


User provided reference genes

Program Settings