Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g046430 Amaranthus hybridus HOM05D005705 ORTHO05D007152 5.1e-240 833.9 405 100.0
EL10Ac5g11353 Beta vulgaris HOM05D005705 ORTHO05D007152 1.4e-128 463.8 447 57.5
CAN.G732.1 Capsicum annuum HOM05D005705 ORTHO05D007152 2.9e-118 429.5 417 54.0
Peaxi162Scf00516g00214 Petunia axillaris HOM05D005705 ORTHO05D007152 4.9e-118 428.7 419 54.9
Solyc03g097550.3 Solanum lycopersicum HOM05D005705 ORTHO05D007152 6.4e-118 428.3 420 55.0
Sopen03g028300 Solanum pennellii HOM05D005705 ORTHO05D007152 1.9e-117 426.8 420 54.8
Cc08_g11650 Coffea canephora HOM05D005705 ORTHO05D007152 7.1e-117 424.9 418 55.0
Nitab4.5_0003383g0010 Nicotiana tabacum HOM05D005705 ORTHO05D007152 4.6e-116 422.2 421 54.6
Thecc.03G135500 Theobroma cacao HOM05D005705 ORTHO05D007152 1.0e-115 421.0 446 51.6
Gohir.D03G113100 Gossypium hirsutum HOM05D005705 ORTHO05D007152 1.8e-115 420.2 444 51.4
Gorai.003G119300 Gossypium raimondii HOM05D005705 ORTHO05D007152 3.9e-115 419.1 444 51.1
Atru.chr6.1874 Acer truncatum HOM05D005705 ORTHO05D007152 5.1e-115 418.7 447 52.6
Manes.06G123000 Manihot esculenta HOM05D005705 ORTHO05D007152 6.7e-115 418.3 420 54.0
Nitab4.5_0001332g0070 Nicotiana tabacum HOM05D005705 ORTHO05D007152 8.7e-115 417.9 418 54.1
Nn4g22220 Nelumbo nucifera HOM05D005705 ORTHO05D007152 1.1e-114 417.5 415 54.5
Dinv11204 Davidia involucrata HOM05D005705 ORTHO05D007152 1.5e-114 417.2 418 54.3
TWI14G0152 Tripterygium wilfordii HOM05D005705 ORTHO05D007152 1.6e-113 413.7 420 52.6
CiPaw.11G003500 Carya illinoinensis HOM05D005705 ORTHO05D007152 2.8e-113 412.9 416 54.8
VMungo1309G0782 Vigna mungo HOM05D005705 ORTHO05D007152 3.7e-113 412.5 413 53.8
AUR62029555 Chenopodium quinoa HOM05D005705 ORTHO05D007152 1.4e-112 410.6 428 53.3
arahy.Tifrunner.gnm1.ann1.5ZS0BP Arachis hypogaea HOM05D005705 ORTHO05D007152 4.0e-112 409.1 413 54.0
RcHm_v2.0_Chr7g0189351 Rosa chinensis HOM05D005705 ORTHO05D007152 5.3e-112 408.7 415 52.0
TPR.G35256 Trifolium pratense HOM05D005705 ORTHO05D007152 2.0e-111 406.8 392 54.1
GSVIVG01008591001 Vitis vinifera HOM05D005705 ORTHO05D007152 5.8e-111 405.2 417 54.4
Aqoxy3G01676 Aquilegia oxysepala HOM05D005705 ORTHO05D007152 1.0e-110 404.4 444 50.5
Ciclev10031733m.g Citrus clementina HOM05D005705 ORTHO05D007152 1.3e-110 404.1 413 53.3
Potri.015G101300 Populus trichocarpa HOM05D005705 ORTHO05D007152 1.7e-110 403.7 443 49.9
Sabra15G0121700 Salix brachista HOM05D005705 ORTHO05D007152 8.4e-110 401.4 445 50.1
Eucgr.K02692 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.1e-109 401.0 413 51.8
Phvul.009G162600 Phaseolus vulgaris HOM05D005705 ORTHO05D007152 1.1e-109 401.0 415 52.3
THA.LOC104811568 Tarenaya hassleriana HOM05D005705 ORTHO05D007152 1.4e-109 400.6 448 48.2
Gohir.A03G053840 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.5e-109 399.8 453 49.4
Lalb_Chr08g0237371 Lupinus albus HOM05D005705 ORTHO05D007152 5.5e-109 398.7 416 51.9
AUR62034819 Chenopodium quinoa HOM05D005705 ORTHO05D007152 9.3e-109 397.9 430 52.1
Psat5g053040 Pisum sativum HOM05D005705 ORTHO05D007152 1.2e-108 397.5 420 51.4
CsaV3_1G000320 Cucumis sativus L. HOM05D005705 ORTHO05D007152 1.6e-108 397.1 414 52.4
Lsat_1_v5_gn_1_32681 Lactuca sativa HOM05D005705 ORTHO05D007152 1.6e-108 397.1 417 52.3
Glyma.06G167100 Glycine max HOM05D005705 ORTHO05D007152 2.7e-108 396.4 416 52.9
Eucgr.B00082 Eucalyptus grandis HOM05D005705 ORTHO05D007152 4.6e-108 395.6 409 52.6
FAN13G0195 Fragaria x ananassa HOM05D005705 ORTHO05D007152 4.6e-108 395.6 422 50.5
FAN18G0862 Fragaria x ananassa HOM05D005705 ORTHO05D007152 6.0e-108 395.2 426 50.2
CANSAT80G2532 Cannabis sativa HOM05D005705 ORTHO05D007152 7.9e-108 394.8 446 50.0
Migut.D01284 Erythranthe guttata HOM05D005705 ORTHO05D007152 7.9e-108 394.8 416 52.2
Lj1g0017194 Lotus japonicus HOM05D005705 ORTHO05D007152 7.9e-108 394.8 415 51.8
Ca_16064_v3 Cicer arietinum L. HOM05D005705 ORTHO05D007152 2.3e-107 393.3 417 51.3
HanXRQChr02g0034161 Helianthus annuus HOM05D005705 ORTHO05D007152 8.7e-107 391.3 423 52.0
Medtr3g098940 Medicago truncatula HOM05D005705 ORTHO05D007152 1.9e-106 390.2 414 51.0
MD14G1151500 Malus domestica HOM05D005705 ORTHO05D007152 2.5e-106 389.8 427 50.1
FAN08G2466 Fragaria x ananassa HOM05D005705 ORTHO05D007152 9.7e-106 387.9 429 49.4
PGR044G0296 Punica granatum HOM05D005705 ORTHO05D007152 8.2e-105 384.8 433 50.8
MD06G1136700 Malus domestica HOM05D005705 ORTHO05D007152 4.1e-104 382.5 415 50.8
ClCG06G018130 Citrullus lanatus HOM05D005705 ORTHO05D007152 5.3e-104 382.1 413 51.3
arahy.Tifrunner.gnm1.ann1.U15GQW Arachis hypogaea HOM05D005705 ORTHO05D007152 1.5e-103 380.6 454 47.8
Eucgr.F01610 Eucalyptus grandis HOM05D005705 ORTHO05D007152 1.5e-103 380.6 412 50.5
Sc22g0003610 Simmondsia chinensis HOM05D005705 ORTHO05D007152 2.0e-103 380.2 409 52.3
ATR0582G303 Amborella trichopoda HOM05D005705 ORTHO05D007152 3.4e-103 379.4 444 47.5
vmacro19145 Vaccinium macrocarpon HOM05D005705 ORTHO05D007152 4.5e-103 379.0 452 49.6
ECA247G0704 Erigeron canadensis HOM05D005705 ORTHO05D007152 2.9e-102 376.3 423 51.1
DCAR_026236 Daucus carota HOM05D005705 ORTHO05D007152 1.9e-101 373.6 415 50.6
PSO017G1135 Papaver somniferum HOM05D005705 ORTHO05D007152 1.6e-100 370.5 443 46.7
PSO478G3581 Papaver somniferum HOM05D005705 ORTHO05D007152 1.4e-99 367.5 445 47.4
Zm00001eb241970 Zea mays HOM05D005705 ORTHO05D007152 3.0e-99 366.3 411 48.4
Eucgr.B00079 Eucalyptus grandis HOM05D005705 ORTHO05D007152 7.4e-98 361.7 395 51.1
Aa31LG3G7650 Aethionema arabicum HOM05D005705 ORTHO05D007152 1.8e-96 357.1 456 44.7
CSS0038740 Camellia sinensis var. sinensis HOM05D005705 ORTHO05D007152 1.8e-96 357.1 445 48.1
QL10p001835 Quercus lobata HOM05D005705 ORTHO05D007152 3.1e-96 356.3 556 40.8
Sed0013194 Sechium edule HOM05D005705 ORTHO05D007152 6.9e-96 355.1 349 54.7
ECA247G2912 Erigeron canadensis HOM05D005705 ORTHO05D007152 8.5e-94 348.2 422 48.6
Prupe.5G146600 Prunus persica HOM05D005705 ORTHO05D007152 1.1e-93 347.8 415 47.0
Rhsim08G0193700 Rhododendron simsii HOM05D005705 ORTHO05D007152 3.2e-93 346.3 390 52.3
FAN04G2238 Fragaria x ananassa HOM05D005705 ORTHO05D007152 2.7e-92 343.2 458 43.9
C03p19170 Brassica napus HOM05D005705 ORTHO05D007152 3.0e-91 339.7 352 51.7
BcaC01g06077 Brassica carinata HOM05D005705 ORTHO05D007152 2.0e-90 337.0 447 45.9
AL8G25400 Arabidopsis lyrata HOM05D005705 ORTHO05D007152 2.6e-90 336.7 445 44.5
A03p16280 Brassica napus HOM05D005705 ORTHO05D007152 3.3e-90 336.3 352 51.1
Thhalv10013761m.g Eutrema salsugineum HOM05D005705 ORTHO05D007152 5.7e-90 335.5 445 43.8
BcaC01g06097 Brassica carinata HOM05D005705 ORTHO05D007152 7.4e-90 335.1 352 51.1
MSTRG.4614 Avicennia marina HOM05D005705 ORTHO05D007152 2.8e-89 333.2 314 56.7
Sp6g13350 Schrenkiella parvula HOM05D005705 ORTHO05D007152 2.8e-89 333.2 446 44.4
AT5G51140 Arabidopsis thaliana HOM05D005705 ORTHO05D007152 4.8e-89 332.4 446 44.4
BolC3t14305H Brassica oleracea HOM05D005705 ORTHO05D007152 1.8e-88 330.5 353 51.0
BraA03t10919Z Brassica rapa HOM05D005705 ORTHO05D007152 1.8e-88 330.5 446 44.8
A02p12470 Brassica napus HOM05D005705 ORTHO05D007152 7.0e-88 328.6 353 51.8
Nn4g22223 Nelumbo nucifera HOM05D005705 ORTHO05D007152 2.0e-87 327.0 393 47.8
BolC2t08194H Brassica oleracea HOM05D005705 ORTHO05D007152 3.4e-87 326.2 354 51.1
CARHR256910 Cardamine hirsuta HOM05D005705 ORTHO05D007152 3.4e-87 326.2 418 44.7
BraA02t06310Z Brassica rapa HOM05D005705 ORTHO05D007152 4.5e-87 325.9 353 51.3
Carub.0008s1118 Capsella rubella HOM05D005705 ORTHO05D007152 5.9e-87 325.5 352 51.4
C02p20570 Brassica napus HOM05D005705 ORTHO05D007152 1.7e-86 323.9 353 51.0
Hma1.2p1_0168F.1_g074310 Hydrangea macrophylla HOM05D005705 ORTHO05D007152 5.0e-86 322.4 373 51.5
Lj5A92G46 Lonicera japonica HOM05D005705 ORTHO05D007152 6.5e-86 322.0 443 44.9
Oeu061128.1 Olea europaea HOM05D005705 ORTHO05D007152 6.5e-86 322.0 483 42.0
Actinidia18330 Actinidia chinensis HOM05D005705 ORTHO05D007152 2.5e-85 320.1 354 52.3
BcaC03g14622 Brassica carinata HOM05D005705 ORTHO05D007152 2.1e-84 317.0 346 50.9
Haze_07188 Corylus avellana HOM05D005705 ORTHO05D007152 2.1e-84 317.0 426 45.1
Duzib084G0308 Durio zibethinus HOM05D005705 ORTHO05D007152 8.0e-84 315.1 393 44.8
TAR374G1739 Trochodendron aralioides HOM05D005705 ORTHO05D007152 9.7e-82 308.1 339 54.3
Eucgr.K02697 Eucalyptus grandis HOM05D005705 ORTHO05D007152 2.2e-81 307.0 431 44.1
RcHm_v2.0_Chr7g0189401 Rosa chinensis HOM05D005705 ORTHO05D007152 3.7e-81 306.2 348 48.3
Hund10107 Selenicereus undatus HOM05D005705 ORTHO05D007152 3.1e-80 303.1 360 47.8
Eucgr.K02689 Eucalyptus grandis HOM05D005705 ORTHO05D007152 7.7e-79 298.5 347 49.6
FvH4_5g08961 Fragaria vesca HOM05D005705 ORTHO05D007152 6.1e-76 288.9 263 56.7
HPP92_015136 Vanilla planifolia HOM05D005705 ORTHO05D007152 1.8e-75 287.3 411 40.4
SGA_v2.0_scaffold37G14637 Striga asiatica HOM05D005705 ORTHO05D007152 2.0e-74 283.9 395 42.8
Pp3c10_5730 Physcomitrium patens HOM05D005705 ORTHO05D007152 1.1e-72 278.1 528 36.2
Dinv23185 Davidia involucrata HOM05D005705 ORTHO05D007152 2.4e-72 276.9 203 70.9
PGR083G0448 Punica granatum HOM05D005705 ORTHO05D007152 1.2e-71 274.6 415 41.0
Mapoly0190s0007 Marchantia polymorpha HOM05D005705 ORTHO05D007152 4.5e-71 272.7 505 35.2
MELO3C026185.2 Cucumis melo HOM05D005705 ORTHO05D007152 2.0e-63 247.3 395 41.8
PGSC0003DMG400031733 Solanum tuberosum HOM05D005705 ORTHO05D007152 1.0e-59 235.0 220 56.4
CDE02G4520 Ceratophyllum demersum HOM05D005705 ORTHO05D007152 2.8e-57 226.9 275 49.8
Gohir.A03G053960 Gossypium hirsutum HOM05D005705 ORTHO05D007152 7.3e-53 212.2 159 65.4
AagrBONN_evm.TU.Sc2ySwM_362.2453 Anthoceros agrestis HOM05D005705 ORTHO05D007152 4.0e-51 206.5 250 48.4
Pp3c10_5680 Physcomitrium patens HOM05D005705 ORTHO05D007152 1.3e-49 201.4 406 36.0
Gohir.D03G113075 Gossypium hirsutum HOM05D005705 ORTHO05D007152 8.3e-49 198.7 195 53.3
Cpa.g.sc4.149 Carica papaya HOM05D005705 ORTHO05D007152 8.9e-43 178.7 156 55.1
Cfa023901 Carpinus fangiana HOM05D005705 ORTHO05D007152 2.4e-32 144.1 377 29.4
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 2.4e-32 144.1 398 28.9
Haze_27069 Corylus avellana HOM05D005705 ORTHO05D007152 7.1e-32 142.5 299 34.8
Os02g0512300 Oryza sativa ssp. japonica HOM05D005705 ORTHO05D007152 4.6e-31 139.8 89 70.8
CBR_g48327 Chara braunii HOM05D005705 ORTHO05D007152 8.6e-30 135.6 235 41.3
Cre17.g702400 Chlamydomonas reinhardtii HOM05D005705 ORTHO05D007152 2.6e-26 124.0 350 30.0
Eucgr.K02687 Eucalyptus grandis HOM05D005705 ORTHO05D007152 2.9e-25 120.6 96 59.4
arahy.Tifrunner.gnm1.ann1.N812UT Arachis hypogaea HOM05D005705 ORTHO05D007152 2.1e-20 104.4 192 37.5
Cpa.g.sc4.145 Carica papaya HOM05D005705 ORTHO05D007152 2.8e-20 104.0 77 59.7
MCO02G106 Micromonas commoda HOM05D005705 ORTHO05D007152 4.7e-20 103.2 106 47.2
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 8.1e-20 102.4 79 62.0
MBI11_g13060_MAGBIO Magnolia biondii HOM05D005705 ORTHO05D007152 1.2e-18 98.6 63 74.6
arahy.Tifrunner.gnm1.ann1.MH3CCF Arachis hypogaea HOM05D001440 ORTHO05D007152 2.0e-18 97.8 67 70.1
arahy.Tifrunner.gnm1.ann1.5M4P4Y Arachis hypogaea HOM05D005705 ORTHO05D007152 7.6e-18 95.9 64 71.9
arahy.Tifrunner.gnm1.ann1.DA2DAM Arachis hypogaea HOM05D005705 ORTHO05D007152 2.9e-17 94.0 65 69.2
arahy.Tifrunner.gnm1.ann1.WM01PM Arachis hypogaea HOM05D001440 ORTHO05D013218 1.4e-16 91.7 66 66.7
Cpa.g.sc4.148 Carica papaya HOM05D005705 ORTHO05D007152 5.1e-14 83.2 67 61.2
AagrBONN_evm.TU.Sc2ySwM_368.1098 Anthoceros agrestis HOM05D005705 ORTHO05D007152 1.8e-11 74.7 54 64.8
FAN03G2469 Fragaria x ananassa HOM05D006791 ORTHO05D008221 3.2e-08 63.9 267 27.0
RcHm_v2.0_Chr1g0363851 Rosa chinensis HOM05D006791 ORTHO05D008221 3.2e-08 63.9 267 27.3
Sabra08G0028900 Salix brachista HOM05D006791 ORTHO05D008221 4.2e-08 63.5 267 26.2
FvH4_7g19860 Fragaria vesca HOM05D006791 ORTHO05D008221 7.1e-08 62.8 265 27.5
FAN06G1214 Fragaria x ananassa HOM05D006791 ORTHO05D008221 7.1e-08 62.8 265 27.5
A03p48770 Brassica napus HOM05D006791 ORTHO05D008221 9.3e-08 62.4 246 24.0
PGR142G3028 Punica granatum HOM05D006791 ORTHO05D008221 1.6e-07 61.6 266 26.7
BraA03t13977Z Brassica rapa HOM05D006791 ORTHO05D008221 2.1e-07 61.2 265 23.8
THA.LOC104802594 Tarenaya hassleriana HOM05D006791 ORTHO05D008221 3.5e-07 60.5 269 26.0
PSO384G4004 Papaver somniferum HOM05D006791 ORTHO05D008221 4.6e-07 60.1 253 24.9
QL08p056563 Quercus lobata HOM05D006791 ORTHO05D008221 4.6e-07 60.1 261 26.1
GSVIVG01016310001 Vitis vinifera HOM05D006791 ORTHO05D008221 4.6e-07 60.1 264 25.4
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 7.9e-07 59.3 38 65.8
Thhalv10010446m.g Eutrema salsugineum HOM05D006791 ORTHO05D008221 1.3e-06 58.5 259 24.3
PSO339G2849 Papaver somniferum HOM05D006791 ORTHO05D008221 1.8e-06 58.2 253 24.9
Thecc.10G070300 Theobroma cacao HOM05D006791 ORTHO05D008221 1.8e-06 58.2 264 25.8
Aa31LG10G7360 Aethionema arabicum HOM05D006791 ORTHO05D008221 2.3e-06 57.8 269 24.5
Duzib106G0039 Durio zibethinus HOM05D006791 ORTHO05D008221 3.9e-06 57.0 312 24.4
Cc02_g11450 Coffea canephora HOM05D006791 ORTHO05D008221 5.1e-06 56.6 257 24.1
TPR.G1805 Trifolium pratense HOM05D006791 ORTHO05D008221 6.7e-06 56.2 272 24.3


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