Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g040820 Amaranthus hybridus HOM05D005861 ORTHO05D007151 6.9e-119 430.6 214 100.0
EL10Ac3g07109 Beta vulgaris HOM05D005861 ORTHO05D007151 3.7e-24 115.9 79 72.2
AUR62039890 Chenopodium quinoa HOM05D005861 ORTHO05D007151 7.1e-23 111.7 79 69.6
QL11p011864 Quercus lobata HOM05D005861 ORTHO05D007151 1.6e-22 110.5 75 69.3
QL93p0142_0007 Quercus lobata HOM05D005861 ORTHO05D007151 1.6e-22 110.5 75 69.3
QL93p2001_0005 Quercus lobata HOM05D005861 ORTHO05D007151 1.6e-22 110.5 75 69.3
AUR62040329 Chenopodium quinoa HOM05D005861 ORTHO05D007151 2.1e-22 110.2 79 68.4
CiPaw.09G138900 Carya illinoinensis HOM05D005861 ORTHO05D007151 2.7e-22 109.8 79 64.6
Gorai.009G012700 Gossypium raimondii HOM05D005861 ORTHO05D007151 2.7e-22 109.8 79 64.6
Ciclev10015087m.g Citrus clementina HOM05D005861 ORTHO05D007151 4.6e-22 109.0 75 62.7
TWI63G1685 Tripterygium wilfordii HOM05D005861 ORTHO05D007151 4.6e-22 109.0 75 64.0
Cfa001144 Carpinus fangiana HOM05D005861 ORTHO05D007151 6.0e-22 108.6 75 66.7
MD10G1226200 Malus domestica HOM05D005861 ORTHO05D007151 1.0e-21 107.8 75 68.0
Thecc.09G140900 Theobroma cacao HOM05D005861 ORTHO05D007151 1.0e-21 107.8 79 64.6
Dinv05874 Davidia involucrata HOM05D005861 ORTHO05D007151 1.3e-21 107.5 75 66.7
Gohir.D05G012400 Gossypium hirsutum HOM05D005861 ORTHO05D007151 1.7e-21 107.1 79 62.0
Glyma.15G156500 Glycine max HOM05D005861 ORTHO05D007151 2.3e-21 106.7 75 68.0
Lalb_Chr18g0052021 Lupinus albus HOM05D005861 ORTHO05D007151 2.3e-21 106.7 79 64.6
Migut.M02023 Erythranthe guttata HOM05D005861 ORTHO05D007151 3.0e-21 106.3 75 62.7
Oeu008732.1 Olea europaea HOM05D005861 ORTHO05D007151 5.1e-21 105.5 79 60.8
GSVIVG01012161001 Vitis vinifera HOM05D005861 ORTHO05D007151 5.1e-21 105.5 78 62.8
Manes.03G071200 Manihot esculenta HOM05D005861 ORTHO05D007151 6.6e-21 105.1 75 64.0
Nitab4.5_0000632g0140 Nicotiana tabacum HOM05D005861 ORTHO05D007151 6.6e-21 105.1 75 66.7
Nitab4.5_0000844g0330 Nicotiana tabacum HOM05D005861 ORTHO05D007151 6.6e-21 105.1 75 66.7
PSO063G0366 Papaver somniferum HOM05D005861 ORTHO05D007151 6.6e-21 105.1 75 62.7
Prupe.4G119100 Prunus persica HOM05D005861 ORTHO05D007151 8.6e-21 104.8 75 65.3
DCAR_003751 Daucus carota HOM05D005861 ORTHO05D007151 1.1e-20 104.4 79 60.8
Peaxi162Scf00036g00158 Petunia axillaris HOM05D005861 ORTHO05D007151 1.1e-20 104.4 75 66.7
Potri.003G155100 Populus trichocarpa HOM05D005861 ORTHO05D007151 1.1e-20 104.4 75 65.3
TWI38G1305 Tripterygium wilfordii HOM05D005861 ORTHO05D007151 1.5e-20 104.0 75 64.0
MSTRG.18594 Avicennia marina HOM05D005861 ORTHO05D007151 1.9e-20 103.6 85 56.5
Cc09_g01980 Coffea canephora HOM05D005861 ORTHO05D007151 1.9e-20 103.6 75 65.3
Phvul.009G243500 Phaseolus vulgaris HOM05D005861 ORTHO05D007151 1.9e-20 103.6 75 65.3
Aqoxy3G04101 Aquilegia oxysepala HOM05D005861 ORTHO05D007151 2.5e-20 103.2 79 62.0
Migut.O00467 Erythranthe guttata HOM05D005861 ORTHO05D007151 2.5e-20 103.2 74 63.5
FvH4_3g13130 Fragaria vesca HOM05D005861 ORTHO05D007151 2.5e-20 103.2 79 60.8
FAN16G2684 Fragaria x ananassa HOM05D005861 ORTHO05D007151 2.5e-20 103.2 79 60.8
FAN21G1611 Fragaria x ananassa HOM05D005861 ORTHO05D007151 2.5e-20 103.2 79 60.8
FAN25G2772 Fragaria x ananassa HOM05D005861 ORTHO05D007151 2.5e-20 103.2 79 60.8
Sabra03G0112200 Salix brachista HOM05D005861 ORTHO05D007151 2.5e-20 103.2 75 64.0
Solyc02g081920.3 Solanum lycopersicum HOM05D005861 ORTHO05D007151 2.5e-20 103.2 75 65.3
Sopen02g026550 Solanum pennellii HOM05D005861 ORTHO05D007151 2.5e-20 103.2 75 65.3
THA.LOC104811881 Tarenaya hassleriana HOM05D005861 ORTHO05D007151 2.5e-20 103.2 79 60.8
arahy.Tifrunner.gnm1.ann1.RN3XR3 Arachis hypogaea HOM05D005861 ORTHO05D007151 3.3e-20 102.8 75 62.7
RcHm_v2.0_Chr5g0021381 Rosa chinensis HOM05D005861 ORTHO05D007151 3.3e-20 102.8 74 63.5
CSS0003156 Camellia sinensis var. sinensis HOM05D005861 ORTHO05D007151 7.3e-20 101.7 79 60.8
Atru.chr10.266 Acer truncatum HOM05D005861 ORTHO05D007151 9.5e-20 101.3 75 65.3
SGA_v2.0_scaffold298G47711 Striga asiatica HOM05D005861 ORTHO05D007151 9.5e-20 101.3 75 60.0
arahy.Tifrunner.gnm1.ann1.MH4CM1 Arachis hypogaea HOM05D005861 ORTHO05D007151 1.2e-19 100.9 75 62.7
PSO782G3554 Papaver somniferum HOM05D005861 ORTHO05D007151 1.2e-19 100.9 76 61.8
TAR636G0982 Trochodendron aralioides HOM05D005861 ORTHO05D007151 1.2e-19 100.9 80 62.5
Glyma.09G049800 Glycine max HOM05D005861 ORTHO05D007151 1.6e-19 100.5 75 64.0
vmacro03562 Vaccinium macrocarpon HOM05D005861 ORTHO05D007151 1.6e-19 100.5 75 62.7
VMungo1309G1344 Vigna mungo HOM05D005861 ORTHO05D007151 1.6e-19 100.5 75 62.7
VMungo0344G0001 Vigna mungo HOM05D005861 ORTHO05D007151 2.1e-19 100.1 75 62.7
VMungo1383G1601 Vigna mungo HOM05D005861 ORTHO05D007151 2.1e-19 100.1 75 62.7
HanXRQChr04g0116561 Helianthus annuus HOM05D005861 ORTHO05D007151 4.7e-19 99.0 75 60.0
ClCG03G004130 Citrullus lanatus HOM05D005861 ORTHO05D007151 6.2e-19 98.6 75 60.0
Haze_05240 Corylus avellana HOM05D005861 ORTHO05D007151 6.2e-19 98.6 92 54.3
CAN.G809.40 Capsicum annuum HOM05D005861 ORTHO05D007151 8.1e-19 98.2 76 64.5
Ca_01979_v3 Cicer arietinum L. HOM05D005861 ORTHO05D007151 8.1e-19 98.2 79 60.8
Gohir.A05G011700 Gossypium hirsutum HOM05D005861 ORTHO05D007151 8.1e-19 98.2 76 60.5
HPP92_009503 Vanilla planifolia HOM05D005861 ORTHO05D007151 8.1e-19 98.2 76 59.2
CsaV3_1G010060 Cucumis sativus L. HOM05D005861 ORTHO05D007151 1.1e-18 97.8 75 60.0
Medtr2g035660 Medicago truncatula HOM05D005861 ORTHO05D007151 1.4e-18 97.4 79 60.8
PGSC0003DMG401007333 Solanum tuberosum HOM05D005861 ORTHO05D007151 1.4e-18 97.4 76 63.2
CDE02G4422 Ceratophyllum demersum HOM05D005861 ORTHO05D007151 1.8e-18 97.1 74 62.2
TPR.G26579 Trifolium pratense HOM05D005861 ORTHO05D007151 1.8e-18 97.1 75 60.0
Eucgr.D00007 Eucalyptus grandis HOM05D005861 ORTHO05D007151 2.3e-18 96.7 77 59.7
PGR004G1814 Punica granatum HOM05D005861 ORTHO05D007151 2.3e-18 96.7 76 65.8
ECA236G3447 Erigeron canadensis HOM05D005861 ORTHO05D007151 4.0e-18 95.9 79 57.0
Lj6g0026320 Lotus japonicus HOM05D005861 ORTHO05D007151 5.2e-18 95.5 76 60.5
MELO3C002396.2 Cucumis melo HOM05D005861 ORTHO05D007151 8.9e-18 94.7 78 59.0
Sc24g0002940 Simmondsia chinensis HOM05D005861 ORTHO05D007151 8.9e-18 94.7 80 58.8
AT4G20130 Arabidopsis thaliana HOM05D005861 ORTHO05D007151 1.2e-17 94.4 79 59.5
CARHR226960 Cardamine hirsuta HOM05D005861 ORTHO05D007151 1.2e-17 94.4 85 56.5
AL7G33690 Arabidopsis lyrata HOM05D005861 ORTHO05D007151 1.5e-17 94.0 79 59.5
Duzib168G0529 Durio zibethinus HOM05D005861 ORTHO05D007151 1.5e-17 94.0 79 58.2
Sed0025210 Sechium edule HOM05D005861 ORTHO05D007151 1.5e-17 94.0 75 56.0
Aa31LG6G2540 Aethionema arabicum HOM05D005861 ORTHO05D007151 2.6e-17 93.2 75 60.0
Nn7g38377 Nelumbo nucifera HOM05D005861 ORTHO05D007151 2.6e-17 93.2 80 60.0
Thhalv10027180m.g Eutrema salsugineum HOM05D005861 ORTHO05D007151 4.4e-17 92.4 79 59.5
Sp7g18560 Schrenkiella parvula HOM05D005861 ORTHO05D007151 4.4e-17 92.4 85 54.1
C03p82790 Brassica napus HOM05D005861 ORTHO05D007151 5.8e-17 92.0 79 58.2
BolC3t20561H Brassica oleracea HOM05D005861 ORTHO05D007151 5.8e-17 92.0 79 58.2
Cpa.g.sc30.93 Carica papaya HOM05D005861 ORTHO05D007151 5.8e-17 92.0 98 48.0
Psat1g150560 Pisum sativum HOM05D005861 ORTHO05D007151 5.8e-17 92.0 78 57.7
BcaB03g11658 Brassica carinata HOM05D005861 ORTHO05D007151 7.6e-17 91.7 79 57.0
BcaC01g00656 Brassica carinata HOM05D005861 ORTHO05D007151 7.6e-17 91.7 79 57.0
A08p14640 Brassica napus HOM05D005861 ORTHO05D007151 7.6e-17 91.7 79 57.0
BraA08t33451Z Brassica rapa HOM05D005861 ORTHO05D007151 7.6e-17 91.7 79 57.0
Zm00001eb345040 Zea mays HOM05D005861 ORTHO05D007151 3.8e-16 89.4 75 56.0
Carub.0007s2100 Capsella rubella HOM05D005861 ORTHO05D007151 8.4e-16 88.2 79 55.7
Pp3c8_21700 Physcomitrium patens HOM05D005861 ORTHO05D007151 2.4e-15 86.7 78 50.0
Ah.08g212320 Amaranthus hybridus HOM05D005861 ORTHO05D007151 1.6e-14 84.0 53 79.2
Mapoly0003s0096 Marchantia polymorpha HOM05D005861 ORTHO05D007151 1.3e-13 80.9 74 52.7
AagrBONN_evm.TU.Sc2ySwM_344.4889 Anthoceros agrestis HOM05D005861 ORTHO05D007151 2.5e-12 76.6 74 47.3
COL.COLO4_24113 Corchorus olitorius HOM05D005861 ORTHO05D003578 1.2e-09 67.8 52 61.5
SMO331G0022 Selaginella moellendorffii HOM05D005861 ORTHO05D007151 1.2e-09 67.8 85 40.0
CBR_g61479 Chara braunii HOM05D005861 ORTHO05D007151 3.4e-09 66.2 79 39.2
unitig_37.g12046 Utricularia gibba HOM05D005861 ORTHO05D007151 3.8e-08 62.8 51 52.9
PGSC0003DMG400012780 Solanum tuberosum HOM05D005861 ORTHO05D007151 2.4e-07 60.1 52 53.8


User provided reference genes

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