Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 5.3e-254 880.6 449 100.0
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 4.7e-218 761.1 451 84.9
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.3e-217 758.8 451 83.6
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 2.8e-199 698.7 448 78.3
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.6e-194 681.8 412 82.8
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 7.7e-189 664.1 448 73.2
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.3e-188 663.3 448 72.3
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 3.8e-188 661.8 448 72.1
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.1e-187 660.2 447 72.7
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.2e-187 658.3 446 73.5
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.5e-187 657.9 448 72.3
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 2.1e-186 656.0 446 72.2
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.8e-185 652.9 447 72.7
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 4.0e-185 651.7 448 72.1
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 4.0e-185 651.7 447 73.4
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.5e-184 649.8 453 72.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.6e-184 649.0 447 72.3
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 7.5e-184 647.5 453 71.7
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 9.8e-184 647.1 447 72.0
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 1.7e-183 646.4 449 69.5
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 3.7e-183 645.2 453 71.5
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 6.3e-183 644.4 448 72.3
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 8.3e-183 644.0 451 69.2
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 1.1e-182 643.7 447 71.4
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 2.7e-181 639.0 492 65.9
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 7.8e-181 637.5 451 69.6
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 7.8e-181 637.5 450 71.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 7.8e-181 637.5 450 70.2
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.3e-180 636.7 454 70.0
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.7e-180 636.3 448 70.1
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 5.0e-180 634.8 448 70.5
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 1.5e-179 633.3 452 70.1
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 3.3e-179 632.1 446 68.6
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.1e-178 629.4 448 69.2
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 3.6e-178 628.6 448 69.6
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.7e-178 628.2 452 69.7
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 8.0e-178 627.5 452 69.5
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.0e-177 627.1 449 69.0
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.3e-177 625.9 453 70.2
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 3.0e-177 625.5 452 69.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 5.2e-177 624.8 450 69.1
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 6.8e-177 624.4 450 68.7
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.2e-176 623.6 449 67.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 2.6e-176 622.5 448 69.6
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.3e-175 620.2 447 67.6
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.3e-175 620.2 448 66.7
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.7e-175 619.8 447 68.2
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 4.9e-175 618.2 447 68.2
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 8.3e-175 617.5 446 67.3
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.1e-174 617.1 447 66.9
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.9e-174 616.3 447 67.3
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 9.2e-174 614.0 446 66.8
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 1.2e-173 613.6 447 68.2
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.5e-173 612.1 446 69.7
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 4.6e-173 611.7 445 67.2
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 4.6e-173 611.7 469 66.7
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 6.0e-173 611.3 447 66.4
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.9e-171 606.3 453 66.0
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 2.5e-171 605.9 451 68.5
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 3.3e-171 605.5 429 70.4
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 4.3e-171 605.1 449 69.0
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 7.3e-171 604.4 453 65.8
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 3.6e-170 602.1 446 66.6
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 8.0e-170 600.9 452 66.6
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.4e-169 600.1 430 70.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 3.1e-169 599.0 447 66.7
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 4.0e-169 598.6 430 69.5
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 8.9e-169 597.4 452 64.8
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 5.8e-168 594.7 446 65.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 5.8e-168 594.7 445 66.3
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 9.8e-168 594.0 417 69.5
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.7e-167 593.2 452 64.6
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 4.9e-167 591.7 446 66.1
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 6.4e-167 591.3 446 65.7
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 3.2e-166 589.0 430 67.7
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 4.1e-166 588.6 453 64.2
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.0e-164 583.9 483 63.1
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 3.0e-164 582.4 446 64.6
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.3e-163 578.6 416 68.0
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 5.6e-163 578.2 446 64.3
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 2.3e-161 572.8 444 65.1
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 3.1e-161 572.4 444 63.7
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 3.1e-161 572.4 444 63.7
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 3.1e-161 572.4 395 70.4
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.4e-160 568.9 416 67.5
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.1e-158 563.9 452 61.9
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 3.2e-158 562.4 448 61.2
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 4.6e-157 558.5 398 69.8
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.3e-156 556.2 394 70.3
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 6.2e-154 548.1 451 61.0
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 2.4e-153 546.2 451 63.0
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 1.6e-149 533.5 450 61.6
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.7e-140 503.4 355 68.2
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.6e-138 496.9 399 61.2
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 5.8e-136 488.4 322 73.9
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.9e-131 473.4 417 59.2
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 3.1e-121 439.5 450 48.2
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.2e-117 427.6 310 64.5
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 7.9e-117 424.9 454 48.2
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.8e-116 423.7 457 48.6
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.0e-108 397.9 420 53.6
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 3.8e-95 352.8 416 44.0
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 4.2e-86 322.8 220 70.5
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.9e-78 297.4 423 39.2
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 2.9e-71 273.5 194 69.6
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.9e-34 150.6 149 53.0
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 5.4e-33 146.4 163 51.5
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 2.4e-28 131.0 77 79.2
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 3.2e-25 120.6 96 72.9
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 3.0e-23 114.0 170 38.2
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 3.5e-16 90.5 54 81.5
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 7.1e-09 66.2 49 71.4
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 2.7e-08 64.3 36 80.6


User provided reference genes

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