Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.8e-66 256.5 128 100.0
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.5e-36 157.1 117 72.6
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 3.9e-32 142.5 144 59.0
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.6e-30 137.1 102 71.6
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 1.4e-29 134.0 102 69.6
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 2.3e-29 133.3 115 65.2
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 3.1e-29 132.9 109 67.9
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 4.0e-29 132.5 111 69.4
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 6.8e-29 131.7 116 63.8
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.2e-28 131.0 99 70.7
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 1.2e-28 131.0 110 64.5
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 4.4e-28 129.0 109 66.1
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 5.8e-28 128.6 109 67.0
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 7.5e-28 128.3 102 69.6
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 1.7e-27 127.1 102 68.6
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.9e-27 126.3 106 64.2
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 2.9e-27 126.3 106 66.0
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 3.7e-27 125.9 102 68.6
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 3.7e-27 125.9 102 67.6
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 3.7e-27 125.9 114 63.2
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 4.9e-27 125.6 101 70.3
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 8.3e-27 124.8 106 64.2
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 1.4e-26 124.0 100 65.0
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 1.9e-26 123.6 108 65.7
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 2.4e-26 123.2 105 61.9
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 2.4e-26 123.2 99 67.7
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 2.4e-26 123.2 106 62.3
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 4.1e-26 122.5 121 57.9
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 4.1e-26 122.5 119 63.9
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 5.4e-26 122.1 108 64.8
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 5.4e-26 122.1 99 66.7
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 1.6e-25 120.6 103 66.0
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.6e-25 120.6 106 61.3
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.0e-25 120.2 102 63.7
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 3.5e-25 119.4 106 62.3
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 4.6e-25 119.0 137 56.9
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 7.8e-25 118.2 118 61.0
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 7.8e-25 118.2 102 64.7
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.0e-24 117.9 99 64.6
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 1.3e-24 117.5 99 65.7
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.7e-24 117.1 102 63.7
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 2.3e-24 116.7 110 60.9
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 2.3e-24 116.7 110 60.9
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 2.3e-24 116.7 110 60.9
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 2.3e-24 116.7 112 59.8
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 2.3e-24 116.7 73 78.1
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 2.3e-24 116.7 118 59.3
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 2.3e-24 116.7 109 60.6
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 3.0e-24 116.3 114 58.8
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 5.0e-24 115.5 109 62.4
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 6.6e-24 115.2 109 60.6
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 6.6e-24 115.2 69 84.1
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 2.5e-23 113.2 108 63.0
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 7.3e-23 111.7 108 62.0
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 7.3e-23 111.7 106 61.3
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 7.3e-23 111.7 100 62.0
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 1.2e-22 110.9 131 52.7
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 1.2e-22 110.9 102 61.8
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.2e-22 110.9 103 61.2
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 1.6e-22 110.5 114 56.1
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.8e-22 109.8 102 60.8
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 6.2e-22 108.6 61 80.3
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 8.1e-22 108.2 59 86.4
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 8.1e-22 108.2 129 50.4
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 8.1e-22 108.2 59 86.4
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 1.1e-21 107.8 102 58.8
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.4e-21 107.5 102 58.8
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 1.8e-21 107.1 102 62.7
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 1.8e-21 107.1 100 57.0
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 2.3e-21 106.7 99 60.6
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 4.0e-21 105.9 91 64.8
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 6.8e-21 105.1 59 84.7
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 8.9e-21 104.8 127 51.2
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 8.9e-21 104.8 102 58.8
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 1.5e-20 104.0 59 83.1
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 1.5e-20 104.0 116 56.0
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 1.5e-20 104.0 59 83.1
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 2.6e-20 103.2 102 57.8
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 3.4e-20 102.8 61 78.7
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 3.4e-20 102.8 79 69.6
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 4.4e-20 102.4 51 94.1
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 7.5e-20 101.7 54 87.0
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 7.5e-20 101.7 93 60.2
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 7.5e-20 101.7 88 64.8
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 1.3e-19 100.9 71 71.8
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 1.7e-19 100.5 93 62.4
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 4.9e-19 99.0 96 61.5
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 1.9e-18 97.1 68 73.5
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.1e-18 95.9 93 58.1
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 2.7e-17 93.2 104 51.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 6.0e-17 92.0 127 47.2
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 3.3e-15 86.3 128 45.3
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 7.3e-15 85.1 128 44.5
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 3.1e-13 79.7 98 50.0
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 4.1e-10 69.3 58 60.3


User provided reference genes

Program Settings