Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 7.4e-71 270.4 134 100.0
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 7.7e-52 207.2 162 66.0
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 2.1e-49 199.1 162 63.6
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 1.0e-43 180.3 107 80.4
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 4.0e-40 168.3 162 53.1
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 5.7e-39 164.5 166 51.8
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 1.3e-38 163.3 158 53.8
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 2.9e-38 162.2 166 52.4
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 2.9e-38 162.2 193 46.6
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 4.9e-38 161.4 163 52.8
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 2.4e-37 159.1 164 53.0
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 3.2e-37 158.7 164 50.0
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 5.4e-37 157.9 164 53.0
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 1.2e-36 156.8 163 50.9
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 3.5e-36 155.2 161 51.6
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 5.9e-36 154.5 167 50.9
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 5.9e-36 154.5 167 50.9
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 5.9e-36 154.5 166 50.6
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 2.3e-35 152.5 163 50.3
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 2.9e-35 152.1 162 53.1
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 3.9e-35 151.8 163 49.1
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 5.0e-35 151.4 164 53.0
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 5.0e-35 151.4 164 52.4
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 5.0e-35 151.4 163 50.3
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 6.6e-35 151.0 160 49.4
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 8.6e-35 150.6 163 49.7
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 1.1e-34 150.2 164 51.8
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 3.3e-34 148.7 170 50.0
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 5.6e-34 147.9 161 52.2
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 5.6e-34 147.9 163 51.5
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 1.2e-33 146.7 164 50.0
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 2.8e-33 145.6 163 48.5
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 4.7e-33 144.8 165 49.1
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 6.2e-33 144.4 166 49.4
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 1.0e-32 143.7 161 48.4
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 1.4e-32 143.3 166 48.8
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 3.1e-32 142.1 104 64.4
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 3.1e-32 142.1 162 48.8
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 6.8e-32 141.0 162 47.5
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 2.0e-31 139.4 163 47.9
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 2.0e-31 139.4 104 65.4
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 5.8e-31 137.9 162 49.4
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 7.5e-31 137.5 164 46.3
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 7.5e-31 137.5 162 48.1
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 7.5e-31 137.5 163 47.9
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 9.8e-31 137.1 164 46.3
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 9.8e-31 137.1 164 46.3
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 2.2e-30 136.0 162 43.8
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 4.9e-30 134.8 165 47.3
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 6.4e-30 134.4 162 47.5
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 1.1e-29 133.7 162 46.3
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 1.9e-29 132.9 187 43.3
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 2.4e-29 132.5 162 46.9
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 7.0e-29 131.0 109 64.2
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 1.2e-28 130.2 111 61.3
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 1.2e-28 130.2 168 47.0
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 1.6e-28 129.8 123 53.7
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 1.3e-27 126.7 113 56.6
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 2.3e-27 125.9 123 52.8
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 3.0e-27 125.6 161 45.3
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 6.6e-27 124.4 162 45.7
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 1.9e-26 122.9 162 45.1
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 7.3e-26 120.9 176 42.0
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 2.8e-25 119.0 105 58.1
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 1.4e-24 116.7 128 48.4
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 1.8e-24 116.3 157 43.3
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 4.0e-24 115.2 164 43.3
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 5.2e-24 114.8 107 55.1
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 6.8e-24 114.4 168 42.3
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 8.9e-24 114.0 104 57.7
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 1.4e-16 90.1 82 54.9
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 5.8e-15 84.7 110 41.8
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 8.4e-14 80.9 83 56.6
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 1.2e-12 77.0 94 43.6
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 2.3e-11 72.8 188 28.7
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 1.1e-10 70.5 163 30.1
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 1.1e-10 70.5 162 32.1
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 6.2e-09 64.7 80 40.0


User provided reference genes

Program Settings