Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g203630 Amaranthus hybridus HOM05D004363 ORTHO05D005110 1.5e-56 222.6 110 100.0
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.2e-34 149.8 209 43.5
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 4.6e-34 147.9 209 43.1
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 1.5e-32 142.9 209 43.1
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 5.2e-30 134.4 174 43.7
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 3.4e-29 131.7 208 39.9
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 3.4e-29 131.7 208 39.4
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 3.4e-29 131.7 208 39.4
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 5.8e-29 131.0 207 39.6
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 9.9e-29 130.2 209 38.3
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.7e-28 129.4 208 38.9
Lj1C1055T8 Lonicera japonica HOM05D004363 ORTHO05D005110 2.2e-28 129.0 209 38.8
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 6.4e-28 127.5 209 38.3
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 6.4e-28 127.5 209 38.3
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 8.3e-28 127.1 209 38.3
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 8.3e-28 127.1 208 38.9
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 1.1e-27 126.7 205 39.0
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.4e-27 126.3 209 38.3
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 1.4e-27 126.3 209 38.3
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 1.4e-27 126.3 205 39.0
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 5.4e-27 124.4 207 37.2
Gohir.D04G091900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 5.4e-27 124.4 209 36.8
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 7.1e-27 124.0 174 40.8
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 9.2e-27 123.6 207 37.2
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 9.2e-27 123.6 209 36.4
Gohir.A04G054750 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.2e-26 123.2 209 37.8
Cpa.g.sc104.18 Carica papaya HOM05D004363 ORTHO05D005110 1.6e-26 122.9 209 36.8
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 1.6e-26 122.9 209 36.4
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 1.6e-26 122.9 207 37.7
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 2.7e-26 122.1 209 36.8
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.7e-26 122.1 208 36.5
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 3.5e-26 121.7 208 35.6
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 3.5e-26 121.7 204 38.2
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 4.6e-26 121.3 209 35.4
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 4.6e-26 121.3 209 36.8
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 4.6e-26 121.3 207 36.7
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 6.0e-26 120.9 205 38.0
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 7.8e-26 120.6 209 36.4
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 7.8e-26 120.6 209 36.4
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 1.3e-25 119.8 209 37.3
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 1.3e-25 119.8 208 35.6
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 1.7e-25 119.4 208 36.5
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 2.3e-25 119.0 207 36.2
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 3.0e-25 118.6 209 37.3
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 3.0e-25 118.6 209 36.4
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 3.9e-25 118.2 209 34.9
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 5.1e-25 117.9 204 35.3
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 5.1e-25 117.9 209 35.9
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 8.6e-25 117.1 207 35.3
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 8.6e-25 117.1 207 35.3
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 1.1e-24 116.7 207 35.3
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 1.5e-24 116.3 207 36.2
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 1.5e-24 116.3 209 35.4
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.5e-24 116.3 208 35.6
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 1.9e-24 115.9 209 34.0
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.9e-24 115.9 209 35.9
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 1.9e-24 115.9 204 36.8
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 3.3e-24 115.2 231 32.9
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 5.6e-24 114.4 207 36.2
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 9.5e-24 113.6 209 33.5
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 1.6e-23 112.8 209 35.4
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 2.1e-23 112.5 208 35.6
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 2.1e-23 112.5 203 35.5
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 2.8e-23 112.1 208 34.1
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 3.6e-23 111.7 207 35.3
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 3.6e-23 111.7 205 34.6
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 4.7e-23 111.3 208 35.1
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 4.7e-23 111.3 209 34.4
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 4.7e-23 111.3 207 34.3
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 6.2e-23 110.9 209 34.9
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 6.2e-23 110.9 209 34.9
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 6.2e-23 110.9 189 38.6
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 1.1e-22 110.2 209 34.9
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 1.1e-22 110.2 204 34.8
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 1.4e-22 109.8 209 34.9
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 1.4e-22 109.8 228 32.5
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 1.4e-22 109.8 207 34.3
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 1.8e-22 109.4 209 34.0
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 2.4e-22 109.0 209 34.4
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 2.4e-22 109.0 203 35.0
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 4.0e-22 108.2 203 34.5
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 5.2e-22 107.8 209 34.0
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.8e-22 107.5 240 30.0
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 8.9e-22 107.1 209 34.0
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 8.9e-22 107.1 210 33.3
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 2.6e-21 105.5 208 33.2
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 3.4e-21 105.1 209 33.0
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 5.8e-21 104.4 210 33.3
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 7.6e-21 104.0 203 32.0
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 9.9e-21 103.6 209 33.0
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 9.9e-21 103.6 209 33.0
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 1.7e-20 102.8 207 30.9
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 2.2e-20 102.4 207 32.9
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 4.9e-20 101.3 244 30.3
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 8.4e-20 100.5 195 32.8
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 1.4e-19 99.8 63 73.0
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 5.4e-19 97.8 66 69.7
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 1.6e-18 96.3 209 31.6
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 2.7e-18 95.5 209 31.6
SEGI_10491 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 4.6e-18 94.7 62 72.6
Haze_20158 Corylus avellana HOM05D004363 ORTHO05D005110 6.0e-18 94.4 54 77.8
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 7.8e-18 94.0 209 31.6
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 7.8e-18 94.0 61 72.1
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 1.0e-17 93.6 188 33.5
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 8.7e-17 90.5 65 66.2
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 8.7e-17 90.5 65 64.6
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 1.5e-16 89.7 64 62.5
Actinidia03986 Actinidia chinensis HOM05D004363 ORTHO05D005110 4.3e-16 88.2 66 63.6
CSS0037163 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.6e-15 86.3 70 61.4
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 2.1e-15 85.9 208 28.4
Actinidia03879 Actinidia chinensis HOM05D004363 ORTHO05D005110 8.1e-15 84.0 67 59.7
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 1.4e-14 83.2 72 56.9
SHI08954 Sapria himalayana HOM05D004363 ORTHO05D005110 1.8e-14 82.8 53 67.9
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 3.4e-13 78.6 66 57.6
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 9.9e-13 77.0 54 61.1
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 4.2e-11 71.6 205 26.3
C09p60760 Brassica napus HOM05D004363 ORTHO05D005110 2.1e-10 69.3 76 48.7
SHI08951 Sapria himalayana HOM05D004363 ORTHO05D005110 9.6e-08 60.5 51 56.9
SEGI_19509 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 3.1e-06 55.5 68 41.2


User provided reference genes

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