Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 4.0e-146 521.5 290 100.0
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 3.8e-72 275.8 293 60.4
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 7.2e-63 245.0 287 55.7
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 6.6e-56 221.9 291 52.9
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.5e-44 184.1 296 46.6
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.4e-44 183.0 288 43.4
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 3.4e-44 183.0 309 41.4
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 2.3e-40 170.2 297 46.1
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 6.6e-40 168.7 218 49.5
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 4.3e-39 166.0 218 49.1
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 4.3e-39 166.0 214 46.7
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 9.5e-39 164.9 296 46.3
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 1.2e-38 164.5 295 46.1
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 2.1e-38 163.7 299 43.5
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 2.8e-38 163.3 294 43.5
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 4.7e-38 162.5 300 44.3
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 8.1e-38 161.8 294 46.6
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 8.1e-38 161.8 296 38.5
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.4e-37 161.0 299 41.8
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.4e-37 161.0 219 46.6
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.8e-37 160.6 212 49.5
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.8e-37 160.6 285 48.1
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.1e-37 159.8 127 67.7
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 2.0e-36 157.1 210 48.6
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 3.4e-36 156.4 312 42.3
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 4.4e-36 156.0 196 48.0
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 4.4e-36 156.0 284 43.0
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 5.8e-36 155.6 304 46.4
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 7.5e-36 155.2 282 42.6
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.7e-35 154.1 289 41.9
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.2e-35 153.7 218 46.3
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 2.2e-35 153.7 180 50.6
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 2.9e-35 153.3 289 39.4
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.9e-35 152.5 292 43.5
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 8.3e-35 151.8 180 51.1
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.1e-34 151.4 212 47.2
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.1e-34 151.4 292 43.5
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.4e-34 151.0 302 40.4
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.9e-34 150.6 310 44.2
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 2.4e-34 150.2 283 44.5
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 2.4e-34 150.2 287 38.0
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 3.2e-34 149.8 215 43.3
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 7.1e-34 148.7 216 45.8
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 7.1e-34 148.7 293 41.6
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-33 147.9 216 46.8
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.1e-33 147.1 289 42.9
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 2.7e-33 146.7 282 41.5
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.7e-33 146.7 216 46.8
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 3.5e-33 146.4 218 44.5
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 6.0e-33 145.6 214 46.3
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 6.0e-33 145.6 286 40.9
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.0e-32 144.8 240 41.2
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.7e-32 144.1 210 45.2
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 2.3e-32 143.7 292 41.4
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 2.3e-32 143.7 259 45.6
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 3.0e-32 143.3 205 43.4
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 5.1e-32 142.5 294 45.2
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 6.6e-32 142.1 207 46.4
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 1.1e-31 141.4 285 39.6
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.1e-31 141.4 222 38.7
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 2.5e-31 140.2 206 44.2
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 2.5e-31 140.2 282 41.1
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 3.3e-31 139.8 201 46.3
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.3e-31 139.8 296 44.6
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 3.3e-31 139.8 276 45.3
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 5.6e-31 139.0 210 47.1
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 5.6e-31 139.0 222 38.3
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 5.6e-31 139.0 277 40.4
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 9.5e-31 138.3 302 41.7
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.2e-30 137.9 209 44.0
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 2.1e-30 137.1 286 45.1
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 2.8e-30 136.7 290 42.8
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.1e-29 134.8 292 42.8
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.4e-29 134.4 299 40.8
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 5.2e-29 132.5 304 40.1
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 8.9e-29 131.7 296 42.9
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 1.2e-28 131.3 290 43.1
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.5e-28 131.0 295 42.4
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 3.4e-28 129.8 289 42.9
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.4e-28 129.8 194 45.9
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 4.4e-28 129.4 298 42.3
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 5.8e-28 129.0 178 45.5
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 7.6e-28 128.6 285 34.4
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.1e-26 124.8 224 39.7
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.4e-26 124.4 174 42.0
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 2.4e-26 123.6 205 42.4
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 5.4e-26 122.5 169 48.5
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 5.4e-26 122.5 294 41.8
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 7.1e-26 122.1 214 39.3
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 4.6e-25 119.4 303 38.0
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 1.7e-24 117.5 299 39.8
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.3e-24 117.1 193 43.0
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 6.6e-24 115.5 213 41.3
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 1.1e-23 114.8 193 43.0
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 1.1e-23 114.8 193 43.0
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.5e-23 114.4 204 40.7
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 5.6e-23 112.5 213 40.4
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 7.3e-23 112.1 134 50.7
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 7.3e-23 112.1 214 36.9
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.4e-21 107.8 129 48.1
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 3.1e-21 106.7 216 36.6
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 3.1e-21 106.7 221 38.5
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 4.0e-21 106.3 216 36.1
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 5.2e-21 105.9 215 38.1
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 6.9e-21 105.5 173 38.7
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 2.9e-19 100.1 294 37.4
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 4.9e-19 99.4 230 36.1
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 5.4e-18 95.9 298 39.6
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 7.1e-18 95.5 302 30.8
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.6e-17 92.8 303 38.3
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 6.0e-17 92.4 213 35.7
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 5.1e-16 89.4 217 35.0
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 9.9e-12 75.1 199 32.2
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.9e-11 73.6 202 32.7
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 1.2e-09 68.2 124 38.7
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 3.9e-08 63.2 77 41.6
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 8.7e-08 62.0 154 29.9
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 5.6e-07 59.3 106 35.8


User provided reference genes

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