Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g201010 Amaranthus hybridus HOM05D000990 ORTHO05D000810 5.0e-188 661.0 344 100.0
AUR62010711 Chenopodium quinoa HOM05D000990 ORTHO05D000810 1.7e-23 114.4 129 52.7
EL10Ac5g12800 Beta vulgaris HOM05D000990 ORTHO05D000810 8.7e-23 112.1 125 53.6
AUR62027256 Chenopodium quinoa HOM05D000990 ORTHO05D000810 1.9e-22 110.9 126 53.2
Ah.11g039780 Amaranthus hybridus HOM05D002133 ORTHO05D002256 1.1e-12 78.6 47 87.2
Hund11454 Selenicereus undatus HOM05D000990 ORTHO05D000810 2.4e-12 77.4 131 39.7
SGA_v2.0_scaffold173G39164 Striga asiatica HOM05D000990 ORTHO05D000810 2.6e-11 73.9 125 39.2
RhsimUnG0160300 Rhododendron simsii HOM05D000990 ORTHO05D000810 5.8e-11 72.8 153 41.2
Rhsim02G0233400 Rhododendron simsii HOM05D000990 ORTHO05D000810 7.6e-11 72.4 153 41.2
Ah.06g194210 Amaranthus hybridus HOM05D000377 ORTHO05D001957 1.0e-10 72.0 49 79.6
GSVIVG01019385001 Vitis vinifera HOM05D000990 ORTHO05D000810 2.2e-10 70.9 136 41.9
AUR62019300 Chenopodium quinoa HOM05D000377 ORTHO05D001957 8.4e-10 68.9 49 75.5
Dinv38925 Davidia involucrata HOM05D000990 ORTHO05D000810 1.4e-09 68.2 133 38.3
Haze_08807 Corylus avellana HOM05D000990 ORTHO05D000810 1.9e-09 67.8 131 38.9
EL10Ac4g10253 Beta vulgaris HOM05D000377 ORTHO05D001957 2.5e-09 67.4 61 63.9
Actinidia27376 Actinidia chinensis HOM05D000990 ORTHO05D000810 4.2e-09 66.6 154 39.0
EL10Ac1g02389 Beta vulgaris HOM05D002133 ORTHO05D002256 4.2e-09 66.6 47 72.3
Ciclev10022220m.g Citrus clementina HOM05D000990 ORTHO05D000810 5.5e-09 66.2 130 38.5
vmacro11387 Vaccinium macrocarpon HOM05D000990 ORTHO05D000810 5.5e-09 66.2 151 39.7
CANSAT21G0814 Cannabis sativa HOM05D000990 ORTHO05D000810 1.2e-08 65.1 131 42.0
AUR62037427 Chenopodium quinoa HOM05D002133 ORTHO05D002256 1.6e-08 64.7 47 72.3
QL01p004711 Quercus lobata HOM05D000377 ORTHO05D001957 1.6e-08 64.7 88 50.0
QL12p032490 Quercus lobata HOM05D000990 ORTHO05D000810 1.6e-08 64.7 130 41.5
AUR62000119 Chenopodium quinoa HOM05D000377 ORTHO05D001957 2.1e-08 64.3 49 75.5
LjContig00312_ERROPOS870357g0002435 Lotus japonicus HOM05D000990 ORTHO05D000810 3.5e-08 63.5 127 37.8
AUR62022485 Chenopodium quinoa HOM05D002133 ORTHO05D002256 4.6e-08 63.2 47 70.2
Duzib068G0730 Durio zibethinus HOM05D000990 ORTHO05D000810 6.0e-08 62.8 130 39.2
Hma1.2p1_1123F.1_g259410 Hydrangea macrophylla HOM05D000990 ORTHO05D000810 7.9e-08 62.4 122 38.5
PGSC0003DMG400006803 Solanum tuberosum HOM05D000377 ORTHO05D001957 7.9e-08 62.4 88 48.9
TWI09G0003 Tripterygium wilfordii HOM05D000377 ORTHO05D001957 7.9e-08 62.4 58 60.3
TAR375G0124 Trochodendron aralioides HOM05D000990 ORTHO05D000810 7.9e-08 62.4 132 38.6
Duzib084G0357 Durio zibethinus HOM05D000990 ORTHO05D000810 1.3e-07 61.6 133 38.3
Sc09g0000710 Simmondsia chinensis HOM05D000377 ORTHO05D001957 1.3e-07 61.6 61 59.0
Sc22g0005510 Simmondsia chinensis HOM05D000990 ORTHO05D000810 1.3e-07 61.6 128 41.4
Aqoxy7G00264 Aquilegia oxysepala HOM05D000990 ORTHO05D000810 1.8e-07 61.2 125 40.0
TAR374G1510 Trochodendron aralioides HOM05D000990 ORTHO05D000810 1.8e-07 61.2 126 41.3
Cpa.g.sc214.8 Carica papaya HOM05D000990 ORTHO05D000810 2.3e-07 60.8 131 38.9
PGSC0003DMG400012196 Solanum tuberosum HOM05D000990 ORTHO05D000810 2.3e-07 60.8 120 36.7
Cfa009772 Carpinus fangiana HOM05D000377 ORTHO05D001957 3.0e-07 60.5 83 48.2
COL.COLO4_34493 Corchorus olitorius HOM05D000990 ORTHO05D000810 3.0e-07 60.5 133 36.8
Haze_23138 Corylus avellana HOM05D000377 ORTHO05D001957 3.0e-07 60.5 83 48.2
Manes.01G060200 Manihot esculenta HOM05D000990 ORTHO05D000810 3.9e-07 60.1 129 34.9
Sed0020502 Sechium edule HOM05D000377 ORTHO05D001957 3.9e-07 60.1 61 52.5
Ah.06g184680 Amaranthus hybridus HOM05D001811 ORTHO05D059958 5.1e-07 59.7 40 80.0
Lalb_Chr16g0377081 Lupinus albus HOM05D000990 ORTHO05D000810 5.1e-07 59.7 131 38.2
Oeu042335.1 Olea europaea HOM05D000990 ORTHO05D000810 5.1e-07 59.7 84 44.0
Solyc08g081300.4 Solanum lycopersicum HOM05D000990 ORTHO05D000810 5.1e-07 59.7 120 35.8
Gohir.A08G028200 Gossypium hirsutum HOM05D000377 ORTHO05D001957 6.7e-07 59.3 88 42.0
Ah.06g184670 Amaranthus hybridus HOM05D004705 ORTHO05D005595 8.7e-07 58.9 37 83.8
CDE05G2951 Ceratophyllum demersum HOM05D000377 ORTHO05D001957 1.1e-06 58.5 61 50.8
Eucgr.E00633 Eucalyptus grandis HOM05D000990 ORTHO05D000810 1.1e-06 58.5 129 35.7
THA.LOC104823591 Tarenaya hassleriana HOM05D000990 ORTHO05D000810 1.1e-06 58.5 130 34.6
CANSAT80G2820 Cannabis sativa HOM05D000377 ORTHO05D001957 1.5e-06 58.2 90 47.8
CiPaw.12G091500 Carya illinoinensis HOM05D000990 ORTHO05D000810 1.5e-06 58.2 131 37.4
Gohir.D08G039000 Gossypium hirsutum HOM05D000377 ORTHO05D001957 1.5e-06 58.2 84 44.0
Gorai.004G037500 Gossypium raimondii HOM05D000377 ORTHO05D001957 1.5e-06 58.2 84 44.0
Sabra16G0163600 Salix brachista HOM05D000377 ORTHO05D001957 1.5e-06 58.2 61 52.5
Sed0016617 Sechium edule HOM05D000377 ORTHO05D001957 1.5e-06 58.2 61 50.8
Hund22031 Selenicereus undatus HOM05D000377 ORTHO05D001957 1.5e-06 58.2 44 68.2
Peaxi162Scf00953g00002 Petunia axillaris HOM05D000377 ORTHO05D001957 1.9e-06 57.8 88 46.6
Solyc01g087170.3 Solanum lycopersicum HOM05D000377 ORTHO05D001957 1.9e-06 57.8 88 46.6
Sopen01g034230 Solanum pennellii HOM05D000377 ORTHO05D001957 1.9e-06 57.8 88 46.6
TWI53G1073 Tripterygium wilfordii HOM05D000377 ORTHO05D001957 1.9e-06 57.8 57 56.1
ClCG10G012350 Citrullus lanatus HOM05D000377 ORTHO05D001957 2.5e-06 57.4 84 45.2
MD14G1108200 Malus domestica HOM05D000990 ORTHO05D000810 2.5e-06 57.4 132 37.9
MSTRG.25623 Avicennia marina HOM05D000990 ORTHO05D000810 3.3e-06 57.0 101 39.6
MELO3C023977.2 Cucumis melo HOM05D000377 ORTHO05D001957 3.3e-06 57.0 84 45.2
CsaV3_3G032140 Cucumis sativus L. HOM05D000377 ORTHO05D001957 3.3e-06 57.0 84 45.2
Gohir.A12G230700 Gossypium hirsutum HOM05D000990 ORTHO05D000810 3.3e-06 57.0 132 35.6
Gorai.003G157200 Gossypium raimondii HOM05D000990 ORTHO05D000810 3.3e-06 57.0 132 36.4
Lalb_Chr03g0034081 Lupinus albus HOM05D000377 ORTHO05D001957 3.3e-06 57.0 88 42.0
Ah.13g068280 Amaranthus hybridus HOM05D001175 ORTHO05D003020 4.3e-06 56.6 32 84.4
Ca_14413_v3 Cicer arietinum L. HOM05D000377 ORTHO05D001957 4.3e-06 56.6 88 43.2
Psat5g207720 Pisum sativum HOM05D000377 ORTHO05D001957 4.3e-06 56.6 49 61.2
Potri.002G161500 Populus trichocarpa HOM05D000990 ORTHO05D000810 4.3e-06 56.6 122 34.4
Sc15g0003510 Simmondsia chinensis HOM05D002133 ORTHO05D002256 4.3e-06 56.6 47 61.7
CiPaw.11G132900 Carya illinoinensis HOM05D000990 ORTHO05D000810 5.7e-06 56.2 138 36.2
Duzib138G0058 Durio zibethinus HOM05D000377 ORTHO05D001957 5.7e-06 56.2 88 43.2
Phvul.005G022000 Phaseolus vulgaris HOM05D000377 ORTHO05D001957 5.7e-06 56.2 59 52.5
QL04p006535 Quercus lobata HOM05D000377 ORTHO05D001957 5.7e-06 56.2 62 53.2
Sopen08g029610 Solanum pennellii HOM05D000990 ORTHO05D000810 5.7e-06 56.2 123 34.1
TAR369G1083 Trochodendron aralioides HOM05D000377 ORTHO05D001957 5.7e-06 56.2 84 45.2
CAN.G1560.4 Capsicum annuum HOM05D000377 ORTHO05D001957 7.4e-06 55.8 84 47.6
FvH4_7g01060 Fragaria vesca HOM05D000377 ORTHO05D001957 7.4e-06 55.8 84 47.6
FAN06G0543 Fragaria x ananassa HOM05D000377 ORTHO05D001957 7.4e-06 55.8 84 47.6
FAN10G2540 Fragaria x ananassa HOM05D000377 ORTHO05D001957 7.4e-06 55.8 84 47.6
Gohir.D12G231800 Gossypium hirsutum HOM05D000990 ORTHO05D000810 7.4e-06 55.8 132 35.6
BcaB02g07897 Brassica carinata HOM05D000990 ORTHO05D000810 9.6e-06 55.5 131 37.4
Cfa012206 Carpinus fangiana HOM05D000990 ORTHO05D000810 9.6e-06 55.5 56 57.1
CiPaw.14G119000 Carya illinoinensis HOM05D000377 ORTHO05D001957 9.6e-06 55.5 61 52.5
Duzib133G1138 Durio zibethinus HOM05D000377 ORTHO05D001957 9.6e-06 55.5 82 43.9
FAN01G0334 Fragaria x ananassa HOM05D000377 ORTHO05D001957 9.6e-06 55.5 84 47.6
FAN03G2539 Fragaria x ananassa HOM05D000377 ORTHO05D001957 9.6e-06 55.5 84 47.6
Gohir.D08G202400 Gossypium hirsutum HOM05D000990 ORTHO05D000810 9.6e-06 55.5 132 34.8
Gorai.004G213600 Gossypium raimondii HOM05D000990 ORTHO05D000810 9.6e-06 55.5 132 34.8
MBI01_g32960_MAGBIO Magnolia biondii HOM05D000377 ORTHO05D001957 9.6e-06 55.5 88 43.2
Nn7g36200 Nelumbo nucifera HOM05D000377 ORTHO05D001957 9.6e-06 55.5 61 49.2
RcHm_v2.0_Chr1g0316051 Rosa chinensis HOM05D000377 ORTHO05D001957 9.6e-06 55.5 84 47.6
GSVIVG01001586001 Vitis vinifera HOM05D000990 ORTHO05D000810 9.6e-06 55.5 68 48.5


User provided reference genes

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