Gene: Sopen08g029610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g029610
  • Transcript Identifier Sopen08g029610.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 68931949-68933782 : negative

Gene Family Information

  • ID HOM05D000990
  • #Genes/#Species 608/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g029610.1

Descriptions

  • Description RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: mitochondrion | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING-H2 finger B1A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010729
ISO
PLAZA Integrative Orthologypositive regulation of hydrogen peroxide biosynthetic process AT4G23450
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G23450
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT4G23450
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT4G23450

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT4G23450
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G23450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G23450
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G41350
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G23450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated