Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.04g165320 Amaranthus hybridus HOM05D002586 ORTHO05D007009 3.6e-97 358.2 179 100.0
AUR62029292 Chenopodium quinoa HOM05D002586 ORTHO05D007009 1.0e-43 180.6 179 58.7
EL10Ac4g08040 Beta vulgaris HOM05D002586 ORTHO05D007009 1.1e-40 170.6 177 54.2
AUR62041166 Chenopodium quinoa HOM05D002586 ORTHO05D007009 3.8e-38 162.2 165 56.4
RcHm_v2.0_Chr5g0036281 Rosa chinensis HOM05D002586 ORTHO05D007009 1.9e-37 159.8 173 49.1
Dinv08360 Davidia involucrata HOM05D002586 ORTHO05D007009 2.5e-37 159.5 175 47.4
Ca_01793_v3 Cicer arietinum L. HOM05D002586 ORTHO05D007009 5.5e-37 158.3 169 50.9
Lalb_Chr01g0017111 Lupinus albus HOM05D002586 ORTHO05D007009 5.5e-37 158.3 173 49.1
Lj3g0014478 Lotus japonicus HOM05D002586 ORTHO05D007009 9.4e-37 157.5 170 50.0
arahy.Tifrunner.gnm1.ann1.I2I2ZX Arachis hypogaea HOM05D002586 ORTHO05D007009 1.2e-36 157.1 169 50.3
arahy.Tifrunner.gnm1.ann1.XS9HJ1 Arachis hypogaea HOM05D002586 ORTHO05D007009 1.6e-36 156.8 169 50.3
Actinidia35288 Actinidia chinensis HOM05D002586 ORTHO05D007009 4.7e-36 155.2 170 47.6
TPR.G32856 Trifolium pratense HOM05D002586 ORTHO05D007009 4.7e-36 155.2 169 49.7
CANSAT11G0569 Cannabis sativa HOM05D002586 ORTHO05D007009 7.9e-36 154.5 170 48.8
FvH4_3g21210 Fragaria vesca HOM05D002586 ORTHO05D007009 7.9e-36 154.5 173 46.8
FAN11G1488 Fragaria x ananassa HOM05D002586 ORTHO05D007009 7.9e-36 154.5 173 46.8
Thecc.07G068800 Theobroma cacao HOM05D002586 ORTHO05D007009 7.9e-36 154.5 170 47.6
CSS0047341 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007009 1.0e-35 154.1 170 47.6
Nitab4.5_0001386g0040 Nicotiana tabacum HOM05D002586 ORTHO05D007009 1.0e-35 154.1 170 48.8
GSVIVG01014467001 Vitis vinifera HOM05D002586 ORTHO05D007009 1.4e-35 153.7 175 46.9
FAN25G2965 Fragaria x ananassa HOM05D002586 ORTHO05D007009 1.8e-35 153.3 173 46.2
Medtr2g081230 Medicago truncatula HOM05D002586 ORTHO05D007009 1.8e-35 153.3 169 49.7
Sc07g0002680 Simmondsia chinensis HOM05D002586 ORTHO05D007009 1.8e-35 153.3 175 47.4
CSS0041753 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007009 2.3e-35 152.9 170 47.6
Cc05_g12810 Coffea canephora HOM05D002586 ORTHO05D007009 2.3e-35 152.9 170 48.8
AT4G27340 Arabidopsis thaliana HOM05D002586 ORTHO05D007009 3.0e-35 152.5 177 48.0
Glyma.12G217900 Glycine max HOM05D002586 ORTHO05D007009 3.0e-35 152.5 169 49.7
Peaxi162Scf00000g00783 Petunia axillaris HOM05D002586 ORTHO05D007009 3.0e-35 152.5 170 48.2
Potri.011G125700 Populus trichocarpa HOM05D002586 ORTHO05D007009 3.0e-35 152.5 172 48.3
Psat5g247040 Pisum sativum HOM05D002586 ORTHO05D007009 3.9e-35 152.1 169 48.5
Solyc12g005280.3 Solanum lycopersicum HOM05D002586 ORTHO05D007009 3.9e-35 152.1 170 47.6
Sopen12g001260 Solanum pennellii HOM05D002586 ORTHO05D007009 3.9e-35 152.1 170 47.6
BcaNung03038 Brassica carinata HOM05D002586 ORTHO05D007009 6.7e-35 151.4 176 47.2
BcaNung05199 Brassica carinata HOM05D002586 ORTHO05D007009 6.7e-35 151.4 176 47.2
Ciclev10007807m.g Citrus clementina HOM05D002586 ORTHO05D007009 6.7e-35 151.4 170 47.6
FAN21G1241 Fragaria x ananassa HOM05D002586 ORTHO05D007009 6.7e-35 151.4 173 46.2
Gorai.002G077400 Gossypium raimondii HOM05D002586 ORTHO05D007009 6.7e-35 151.4 170 47.1
Nn1g06830 Nelumbo nucifera HOM05D002586 ORTHO05D007009 6.7e-35 151.4 171 47.4
QL08p017150 Quercus lobata HOM05D002586 ORTHO05D007009 6.7e-35 151.4 169 47.9
AL7G25470 Arabidopsis lyrata HOM05D002586 ORTHO05D007009 8.8e-35 151.0 177 48.0
Carub.0007s1354 Capsella rubella HOM05D002586 ORTHO05D007009 8.8e-35 151.0 171 48.0
FAN16G1115 Fragaria x ananassa HOM05D002586 ORTHO05D007009 8.8e-35 151.0 173 46.2
Hma1.2p1_0024F.1_g015940 Hydrangea macrophylla HOM05D002586 ORTHO05D007009 8.8e-35 151.0 169 47.9
Oeu006771.1 Olea europaea HOM05D002586 ORTHO05D007009 8.8e-35 151.0 170 47.6
PGSC0003DMG400021815 Solanum tuberosum HOM05D002586 ORTHO05D007009 8.8e-35 151.0 170 47.1
BcaC09g50582 Brassica carinata HOM05D002586 ORTHO05D007009 1.1e-34 150.6 176 47.2
A01p18520 Brassica napus HOM05D002586 ORTHO05D007009 1.1e-34 150.6 176 47.2
C01p23470 Brassica napus HOM05D002586 ORTHO05D007009 1.1e-34 150.6 176 47.2
BolC1t02293H Brassica oleracea HOM05D002586 ORTHO05D007009 1.1e-34 150.6 176 47.2
BraA01t01801Z Brassica rapa HOM05D002586 ORTHO05D007009 1.1e-34 150.6 176 47.2
Glyma.13G282700 Glycine max HOM05D002586 ORTHO05D007009 1.1e-34 150.6 169 49.1
RhsimUnG0172700 Rhododendron simsii HOM05D002586 ORTHO05D007009 1.1e-34 150.6 170 47.6
CAN.G1181.9 Capsicum annuum HOM05D002586 ORTHO05D007009 1.5e-34 150.2 170 47.1
Gohir.D01G057000 Gossypium hirsutum HOM05D002586 ORTHO05D007009 1.5e-34 150.2 170 46.5
Thhalv10024701m.g Eutrema salsugineum HOM05D002586 ORTHO05D007009 2.6e-34 149.4 170 47.6
Phvul.005G087700 Phaseolus vulgaris HOM05D002586 ORTHO05D007009 2.6e-34 149.4 169 47.9
TAR627G0077 Trochodendron aralioides HOM05D002586 ORTHO05D007009 2.6e-34 149.4 171 46.2
Cfa020488 Carpinus fangiana HOM05D002586 ORTHO05D007009 3.3e-34 149.1 169 47.9
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 4.4e-34 148.7 171 47.4
Duzib268G0598 Durio zibethinus HOM05D002586 ORTHO05D007009 4.4e-34 148.7 172 46.5
Lj8C162T8 Lonicera japonica HOM05D002586 ORTHO05D007009 4.4e-34 148.7 169 45.0
Haze_09552 Corylus avellana HOM05D002586 ORTHO05D007009 5.7e-34 148.3 174 47.7
COL.COLO4_09499 Corchorus olitorius HOM05D002586 ORTHO05D007009 7.4e-34 147.9 170 47.1
MD03G1217000 Malus domestica HOM05D002586 ORTHO05D007009 7.4e-34 147.9 170 46.5
TWI39G0497 Tripterygium wilfordii HOM05D002586 ORTHO05D007009 7.4e-34 147.9 170 47.1
Aqoxy1G03945 Aquilegia oxysepala HOM05D002586 ORTHO05D007009 1.3e-33 147.1 171 47.4
CiPaw.11G178700 Carya illinoinensis HOM05D002586 ORTHO05D007009 1.3e-33 147.1 169 46.7
ECA236G1774 Erigeron canadensis HOM05D002586 ORTHO05D007009 1.7e-33 146.7 172 45.3
Gohir.A01G069800 Gossypium hirsutum HOM05D002586 ORTHO05D007009 1.7e-33 146.7 170 45.9
HanXRQChr11g0331971 Helianthus annuus HOM05D002586 ORTHO05D007009 2.2e-33 146.4 169 46.7
vmacro09574 Vaccinium macrocarpon HOM05D002586 ORTHO05D007009 2.2e-33 146.4 170 46.5
Sp7g25260 Schrenkiella parvula HOM05D002586 ORTHO05D007009 3.7e-33 145.6 170 46.5
ClCG11G018590 Citrullus lanatus HOM05D002586 ORTHO05D007009 4.8e-33 145.2 170 47.6
Ciclev10008679m.g Citrus clementina HOM05D002586 ORTHO05D007009 4.8e-33 145.2 170 46.5
Nitab4.5_0000092g0280 Nicotiana tabacum HOM05D002586 ORTHO05D007009 4.8e-33 145.2 164 47.6
PGR031G2032 Punica granatum HOM05D002586 ORTHO05D007009 6.3e-33 144.8 170 46.5
VMungo1080G0571 Vigna mungo HOM05D002586 ORTHO05D007009 6.3e-33 144.8 164 47.6
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 1.4e-32 143.7 170 46.5
Eucgr.F03364 Eucalyptus grandis HOM05D002586 ORTHO05D007009 1.4e-32 143.7 176 44.9
Eucgr.L01527 Eucalyptus grandis HOM05D002586 ORTHO05D007009 1.4e-32 143.7 176 44.9
MELO3C018180.2 Cucumis melo HOM05D002586 ORTHO05D007009 1.8e-32 143.3 170 45.9
Aqoxy1G02599 Aquilegia oxysepala HOM05D002586 ORTHO05D007009 3.1e-32 142.5 169 47.3
THA.LOC104799902 Tarenaya hassleriana HOM05D002586 ORTHO05D007009 4.1e-32 142.1 170 46.5
SGA_v2.0_scaffold73G24325 Striga asiatica HOM05D002586 ORTHO05D007009 5.3e-32 141.7 170 45.3
Sed0008369 Sechium edule HOM05D002586 ORTHO05D007009 9.1e-32 141.0 170 46.5
DCAR_009991 Daucus carota HOM05D002586 ORTHO05D007009 1.5e-31 140.2 170 43.5
Migut.M01848 Erythranthe guttata HOM05D002586 ORTHO05D007009 2.0e-31 139.8 170 43.5
ATR1132G118 Amborella trichopoda HOM05D002586 ORTHO05D007009 4.5e-31 138.7 170 44.1
Sabra11G0111800 Salix brachista HOM05D002586 ORTHO05D007009 1.3e-30 137.1 158 48.7
MSTRG.6857 Avicennia marina HOM05D002586 ORTHO05D007009 2.9e-30 136.0 168 44.6
PSO832G1285 Papaver somniferum HOM05D002586 ORTHO05D007009 1.1e-29 134.0 169 45.6
unitig_85.g27402 Utricularia gibba HOM05D002586 ORTHO05D007009 5.5e-29 131.7 171 44.4
RhsimUnG0257200 Rhododendron simsii HOM05D002586 ORTHO05D007009 6.1e-28 128.3 213 37.6
HPP92_010114 Vanilla planifolia HOM05D002586 ORTHO05D007009 6.1e-28 128.3 172 40.7
Os01g0390400 Oryza sativa ssp. japonica HOM05D002586 ORTHO05D007009 8.0e-28 127.9 178 42.7
CDE02G1138 Ceratophyllum demersum HOM05D002586 ORTHO05D007009 3.0e-27 125.9 168 44.6
Lsat_1_v5_gn_7_105861 Lactuca sativa HOM05D002586 ORTHO05D007009 6.7e-27 124.8 172 40.7
MBI02_g46150_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007009 6.5e-22 108.2 183 40.4
MD11G1234700 Malus domestica HOM05D002586 ORTHO05D007009 1.5e-21 107.1 68 72.1
MBI02_g38751_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007009 2.0e-18 96.7 172 37.8
SEGI_12373 Sequoiadendron giganteum HOM05D002586 ORTHO05D007009 2.8e-17 92.8 65 69.2
CBR_g34149 Chara braunii HOM05D002586 ORTHO05D007009 1.8e-16 90.1 168 33.9
Pp3c16_12900 Physcomitrium patens HOM05D002586 ORTHO05D007009 4.5e-15 85.5 170 34.1
Potri.001G408950 Populus trichocarpa HOM05D002586 ORTHO05D007009 6.1e-12 75.1 50 66.0
Cpa.g.sc12.18 Carica papaya HOM05D002586 ORTHO05D007009 2.0e-10 70.1 45 68.9
Atru.chr2.2940 Acer truncatum HOM05D002586 ORTHO05D007009 1.2e-07 60.8 39 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2815 Anthoceros agrestis HOM05D002586 ORTHO05D007521 1.6e-07 60.5 81 43.2
MCO10G234 Micromonas commoda HOM05D002586 ORTHO05D007009 3.5e-07 59.3 69 47.8
AagrBONN_evm.TU.Sc2ySwM_228.4718 Anthoceros agrestis HOM05D002586 ORTHO05D007009 7.7e-07 58.2 137 30.7
CSS0041277 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 2.3e-06 56.6 81 43.2
arahy.Tifrunner.gnm1.ann1.KP6B7T Arachis hypogaea HOM05D002586 ORTHO05D007009 2.9e-06 56.2 39 66.7
CSS0035000 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 3.8e-06 55.8 81 43.2
Manes.15G081500 Manihot esculenta HOM05D002586 ORTHO05D007009 5.0e-06 55.5 37 62.2
Mapoly0023s0079 Marchantia polymorpha HOM05D002586 ORTHO05D007009 8.6e-06 54.7 169 26.0


User provided reference genes

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