Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 0.0e+00 2477.6 1277 100.0
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 0.0e+00 1744.2 1292 70.9
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 0.0e+00 1705.3 1331 68.1
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 0.0e+00 1544.6 1313 64.1
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1429.5 1299 59.7
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1303.9 1350 54.5
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1283.5 1363 53.2
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 0.0e+00 1262.3 1370 52.3
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 0.0e+00 1260.0 1362 52.6
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 0.0e+00 1251.1 1327 53.4
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 0.0e+00 1250.0 1365 52.9
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 0.0e+00 1244.6 1364 51.4
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 0.0e+00 1239.9 1362 52.1
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 0.0e+00 1237.6 1345 51.6
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 0.0e+00 1220.3 1350 51.0
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 0.0e+00 1218.8 1364 51.5
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 0.0e+00 1217.6 1348 51.8
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 0.0e+00 1216.8 1357 51.6
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 0.0e+00 1214.9 1350 51.3
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1214.5 1350 51.2
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1205.3 1350 50.8
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 0.0e+00 1198.7 1330 51.1
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 0.0e+00 1198.0 1374 49.7
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 0.0e+00 1187.9 1339 50.7
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1182.5 1321 51.6
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 0.0e+00 1179.5 1492 47.4
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 0.0e+00 1176.8 1385 49.2
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 0.0e+00 1173.3 1329 50.5
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 0.0e+00 1166.4 1446 48.5
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1161.0 1343 49.3
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 0.0e+00 1160.2 1365 48.6
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 0.0e+00 1152.5 1364 49.6
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 0.0e+00 1144.4 1466 47.4
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 0.0e+00 1144.0 1344 48.9
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 0.0e+00 1142.5 1346 48.6
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 0.0e+00 1134.0 1363 48.6
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 0.0e+00 1121.7 1358 48.0
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 0.0e+00 1120.9 1323 49.8
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 0.0e+00 1120.5 1362 48.0
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 0.0e+00 1119.0 1348 48.7
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 0.0e+00 1113.2 1348 48.4
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 0.0e+00 1112.8 1345 48.4
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 0.0e+00 1111.7 1359 47.9
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1108.6 1350 48.2
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 0.0e+00 1108.2 1410 46.0
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 0.0e+00 1107.8 1359 48.1
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1106.3 1389 47.4
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 0.0e+00 1105.9 1338 47.9
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 0.0e+00 1105.5 1341 47.4
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 0.0e+00 1102.0 1346 47.3
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 0.0e+00 1095.9 1360 48.4
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 0.0e+00 1094.3 1359 47.8
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 0.0e+00 1093.2 1346 47.8
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 0.0e+00 1091.6 1419 46.3
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1088.9 1391 46.7
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 0.0e+00 1087.4 1367 47.0
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 0.0e+00 1085.9 1321 46.6
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1085.5 1391 46.5
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 0.0e+00 1084.7 1360 47.6
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 0.0e+00 1081.6 1408 46.9
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 0.0e+00 1077.4 1348 47.6
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 0.0e+00 1076.6 1349 47.7
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 7.9e-311 1070.8 1340 46.7
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 3.8e-310 1068.5 1332 47.4
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 1.1e-309 1067.0 1330 47.4
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 5.6e-309 1064.7 1337 47.5
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 1.8e-307 1059.7 1342 46.6
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 1.8e-307 1059.7 1342 46.6
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 1.8e-307 1059.7 1342 46.6
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 5.2e-307 1058.1 1345 46.2
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 2.2e-305 1052.7 1374 46.1
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 2.9e-305 1052.4 1341 46.4
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 3.8e-305 1052.0 1413 45.0
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 3.8e-305 1052.0 1339 45.8
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.9e-304 1049.7 1311 47.5
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 4.1e-304 1048.5 1347 46.4
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 4.1e-304 1048.5 1328 47.4
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 9.2e-304 1047.3 1400 45.5
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 1.3e-302 1043.5 1405 45.1
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 1.1e-301 1040.4 1352 46.0
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 1.5e-301 1040.0 1397 45.3
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 1.4e-296 1023.5 1336 45.7
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 1.1e-293 1013.8 1342 46.1
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 7.6e-290 1001.1 1352 46.3
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 4.6e-287 991.9 1030 54.0
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 5.8e-282 974.9 1329 45.1
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 5.8e-282 974.9 1376 45.2
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 1.0e-278 964.1 1302 44.0
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 1.4e-272 943.7 1326 43.5
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 2.5e-272 943.0 1240 45.6
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 4.5e-266 922.2 1086 48.7
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 4.8e-260 902.1 1315 42.6
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 1.9e-256 890.2 1327 41.7
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 1.1e-235 821.2 1267 42.1
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 7.8e-202 708.8 910 47.7
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 1.1e-198 698.4 915 46.2
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 6.2e-191 672.5 844 46.9
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 3.1e-190 670.2 1051 42.5
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 4.0e-174 616.7 718 49.6
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 9.9e-173 612.1 679 52.6
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 6.0e-170 602.8 1279 34.6
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 7.9e-170 602.4 661 51.3
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.1e-168 598.6 761 47.0
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 3.2e-163 580.5 706 49.4
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 2.3e-161 574.3 642 51.4
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 3.9e-161 573.5 907 42.7
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 6.5e-148 529.6 597 49.6
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 2.8e-143 514.2 479 56.6
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.2e-141 508.8 788 40.9
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 7.9e-138 496.1 1319 29.4
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.5e-133 480.3 518 49.8
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 5.0e-132 476.9 1314 29.4
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 6.7e-129 466.5 359 65.5
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 5.9e-125 453.4 1142 31.4
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 1.1e-123 449.1 506 49.8
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 1.4e-121 442.2 386 58.5
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 6.3e-119 433.3 358 58.9
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 5.9e-109 400.2 416 50.0
SEGI_08752 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.2e-96 359.4 673 35.5
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 8.6e-92 343.2 356 49.2
Os02g0784100 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 1.7e-84 318.9 244 66.4
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 5.8e-80 303.9 326 49.1
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.7e-68 265.8 337 44.5
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 2.1e-58 232.3 305 43.9
Thecc.01G125300 Theobroma cacao HOM05D005030 ORTHO05D006490 8.4e-55 220.3 358 42.5
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 5.5e-46 191.0 229 49.8
vmacro12844 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 6.7e-44 184.1 206 47.1
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 3.7e-42 178.3 265 40.0
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 6.5e-39 167.5 121 65.3
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 1.6e-37 162.9 267 39.0
MD17G1248600 Malus domestica HOM05D005030 ORTHO05D006490 2.5e-35 155.6 301 37.2
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 1.9e-30 139.4 395 27.8
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 3.1e-25 122.1 509 23.8
CBR_g36665 Chara braunii HOM05D005030 ORTHO05D006490 2.9e-23 115.5 396 24.0
Sc05g0004550 Simmondsia chinensis HOM05D005030 ORTHO05D006490 2.3e-20 105.9 85 64.7
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 3.0e-20 105.5 94 55.3
vmacro12843 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 5.1e-20 104.8 200 38.0
TAR376G0117 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.1e-17 97.1 166 38.6
BcaNung06136 Brassica carinata HOM05D005030 ORTHO05D006490 9.1e-17 94.0 201 33.3
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 1.3e-15 90.1 158 38.6
MBI11_g38367_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 4.4e-11 75.1 71 53.5
SEGI_13008 Sequoiadendron giganteum HOM05D005030 ORTHO05D050943 1.1e-09 70.5 469 22.0
SEGI_37730 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.6e-08 65.9 163 31.9
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.0e-07 61.6 470 25.1
Actinidia09824 Actinidia chinensis HOM05D005030 ORTHO05D001675 7.2e-06 57.8 53 56.6


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