Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g124500 Amaranthus hybridus HOM05D000811 ORTHO05D004743 1.4e-27 125.6 63 100.0
Ah.03g141760 Amaranthus hybridus HOM05D000811 ORTHO05D004743 3.5e-23 110.9 58 93.1
AUR62043613 Chenopodium quinoa HOM05D000811 ORTHO05D004743 1.0e-22 109.4 59 88.1
AUR62044455 Chenopodium quinoa HOM05D000811 ORTHO05D004743 1.0e-22 109.4 59 88.1
QL06p033570 Quercus lobata HOM05D000811 ORTHO05D004743 3.9e-22 107.5 58 84.5
ECA246G0760 Erigeron canadensis HOM05D000811 ORTHO05D004743 1.1e-21 105.9 58 86.2
Potri.007G013400 Populus trichocarpa HOM05D000811 ORTHO05D004743 1.1e-21 105.9 58 86.2
CSS0030860 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 1.5e-21 105.5 58 84.5
CiPaw.08G132800 Carya illinoinensis HOM05D000811 ORTHO05D004743 1.5e-21 105.5 58 84.5
EL10As8g23839 Beta vulgaris HOM05D000811 ORTHO05D004743 1.9e-21 105.1 58 87.9
Cpa.g.sc6.231 Carica papaya HOM05D000811 ORTHO05D004743 1.9e-21 105.1 58 82.8
HanXRQChr14g0441311 Helianthus annuus HOM05D000811 ORTHO05D004743 1.9e-21 105.1 58 84.5
Lsat_1_v5_gn_2_78761 Lactuca sativa HOM05D000811 ORTHO05D004743 1.9e-21 105.1 58 84.5
Hund16485 Selenicereus undatus HOM05D000811 ORTHO05D004743 2.5e-21 104.8 58 84.5
Aa31LG8G15220 Aethionema arabicum HOM05D000811 ORTHO05D004743 4.3e-21 104.0 62 77.4
arahy.Tifrunner.gnm1.ann1.66CB8L Arachis hypogaea HOM05D000811 ORTHO05D004743 4.3e-21 104.0 58 81.0
Dinv40074 Davidia involucrata HOM05D000811 ORTHO05D004743 4.3e-21 104.0 58 82.8
ClCG07G008440 Citrullus lanatus HOM05D000811 ORTHO05D004743 5.7e-21 103.6 57 86.0
Sabra07G0010400 Salix brachista HOM05D000811 ORTHO05D004743 5.7e-21 103.6 59 81.4
Hund14039 Selenicereus undatus HOM05D000811 ORTHO05D004743 5.7e-21 103.6 58 81.0
Solyc01g110530.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 5.7e-21 103.6 58 84.5
Sopen01g052660 Solanum pennellii HOM05D000811 ORTHO05D004743 5.7e-21 103.6 58 84.5
PGSC0003DMG400001617 Solanum tuberosum HOM05D000811 ORTHO05D004743 5.7e-21 103.6 58 82.8
arahy.Tifrunner.gnm1.ann1.LCWP3I Arachis hypogaea HOM05D000811 ORTHO05D004743 7.4e-21 103.2 58 81.0
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 7.4e-21 103.2 58 79.3
Duzib264G0600 Durio zibethinus HOM05D000811 ORTHO05D004743 7.4e-21 103.2 58 81.0
TAR381G1630 Trochodendron aralioides HOM05D000811 ORTHO05D004743 7.4e-21 103.2 58 82.8
A07p02600 Brassica napus HOM05D000811 ORTHO05D004743 9.6e-21 102.8 62 75.8
CAN.G1329.5 Capsicum annuum HOM05D000811 ORTHO05D004743 9.6e-21 102.8 58 82.8
Lsat_1_v5_gn_3_74081 Lactuca sativa HOM05D000811 ORTHO05D004743 9.6e-21 102.8 58 82.8
TWI09G0609 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 9.6e-21 102.8 58 81.0
Haze_03791 Corylus avellana HOM05D000811 ORTHO05D004743 1.3e-20 102.4 61 75.4
ECA238G1572 Erigeron canadensis HOM05D000811 ORTHO05D004743 1.3e-20 102.4 58 79.3
CSS0015066 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 1.6e-20 102.1 58 81.0
CSS0031839 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 1.6e-20 102.1 58 81.0
MD04G1047200 Malus domestica HOM05D000811 ORTHO05D004743 1.6e-20 102.1 58 81.0
Ciclev10026785m.g Citrus clementina HOM05D000811 ORTHO05D004743 2.1e-20 101.7 58 79.3
Sed0008902 Sechium edule HOM05D000811 ORTHO05D004743 2.1e-20 101.7 57 84.2
Thecc.01G020900 Theobroma cacao HOM05D000811 ORTHO05D004743 2.1e-20 101.7 58 79.3
Lalb_Chr05g0229881 Lupinus albus HOM05D000811 ORTHO05D004743 2.8e-20 101.3 58 79.3
MD08G1077500 Malus domestica HOM05D000811 ORTHO05D004743 2.8e-20 101.3 58 81.0
Aqoxy5G01449 Aquilegia oxysepala HOM05D000811 ORTHO05D004743 3.7e-20 100.9 58 79.3
arahy.Tifrunner.gnm1.ann1.T1352T Arachis hypogaea HOM05D000811 ORTHO05D004743 3.7e-20 100.9 58 79.3
Hma1.2p1_0258F.1_g104200 Hydrangea macrophylla HOM05D000811 ORTHO05D004743 3.7e-20 100.9 58 77.6
Lj4A217G58 Lonicera japonica HOM05D000811 ORTHO05D004743 3.7e-20 100.9 58 81.0
TAR625G0006 Trochodendron aralioides HOM05D000811 ORTHO05D004743 3.7e-20 100.9 58 77.6
TAR628G0680 Trochodendron aralioides HOM05D000811 ORTHO05D004743 3.7e-20 100.9 58 79.3
MELO3C016378.2 Cucumis melo HOM05D000811 ORTHO05D004743 4.8e-20 100.5 57 82.5
Dinv23445 Davidia involucrata HOM05D000586 ORTHO05D003356 4.8e-20 100.5 58 79.3
Lj4g0014424 Lotus japonicus HOM05D000811 ORTHO05D004743 4.8e-20 100.5 58 79.3
BraA07t28059Z Brassica rapa HOM05D000811 ORTHO05D004743 6.3e-20 100.1 58 77.6
Dinv33618 Davidia involucrata HOM05D000811 ORTHO05D004743 6.3e-20 100.1 58 79.3
HanXRQChr11g0327321 Helianthus annuus HOM05D000811 ORTHO05D004743 6.3e-20 100.1 58 81.0
Peaxi162Scf00362g01151 Petunia axillaris HOM05D000811 ORTHO05D004743 6.3e-20 100.1 57 78.9
PGR102G1785 Punica granatum HOM05D000811 ORTHO05D004743 6.3e-20 100.1 58 77.6
Dinv41989 Davidia involucrata HOM05D000586 ORTHO05D003356 8.2e-20 99.8 58 77.6
Prupe.1G202600 Prunus persica HOM05D000811 ORTHO05D004743 8.2e-20 99.8 58 79.3
VMungo0289G0001 Vigna mungo HOM05D000811 ORTHO05D004743 8.2e-20 99.8 58 79.3
BcaB08g34786 Brassica carinata HOM05D000811 ORTHO05D004743 1.1e-19 99.4 58 77.6
BraA06t26271Z Brassica rapa HOM05D000811 ORTHO05D004743 1.1e-19 99.4 58 77.6
Thhalv10022913m.g Eutrema salsugineum HOM05D000811 ORTHO05D004743 1.1e-19 99.4 58 77.6
Glyma.16G129900 Glycine max HOM05D000811 ORTHO05D004743 1.1e-19 99.4 58 77.6
Nn5g29274 Nelumbo nucifera HOM05D000811 ORTHO05D004743 1.1e-19 99.4 58 79.3
Sed0024520 Sechium edule HOM05D000811 ORTHO05D004743 1.1e-19 99.4 57 82.5
TWI53G1676 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 1.1e-19 99.4 58 79.3
C06p13450 Brassica napus HOM05D000811 ORTHO05D004743 1.4e-19 99.0 58 77.6
Glyma.02G049500 Glycine max HOM05D000811 ORTHO05D004743 1.4e-19 99.0 58 77.6
Lalb_Chr16g0391191 Lupinus albus HOM05D000811 ORTHO05D004743 1.4e-19 99.0 58 77.6
Nitab4.5_0001133g0070 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.4e-19 99.0 58 79.3
TAR376G0878 Trochodendron aralioides HOM05D000811 ORTHO05D004743 1.4e-19 99.0 58 74.1
GSVIVG01018801001 Vitis vinifera HOM05D000811 ORTHO05D004743 1.4e-19 99.0 58 77.6
BcaC06g36361 Brassica carinata HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 77.6
C07p04900 Brassica napus HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 77.6
BolC7t40891H Brassica oleracea HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 77.6
CsaV3_4G005720 Cucumis sativus L. HOM05D000811 ORTHO05D004743 1.8e-19 98.6 57 80.7
Duzib147G0350 Durio zibethinus HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 77.6
Duzib187G1507 Durio zibethinus HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 75.9
Eucgr.J02408 Eucalyptus grandis HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 75.9
Manes.02G103000 Manihot esculenta HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 77.6
Sc16g0002050 Simmondsia chinensis HOM05D000811 ORTHO05D004743 1.8e-19 98.6 58 77.6
A06p33380 Brassica napus HOM05D000811 ORTHO05D004743 2.4e-19 98.2 58 75.9
THA.LOC104819758 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 2.4e-19 98.2 58 74.1
CARHR108530 Cardamine hirsuta HOM05D000811 ORTHO05D004743 3.1e-19 97.8 58 75.9
Manes.01G144800 Manihot esculenta HOM05D000811 ORTHO05D004743 3.1e-19 97.8 58 77.6
Nitab4.5_0006862g0010 Nicotiana tabacum HOM05D000811 ORTHO05D004743 3.1e-19 97.8 58 77.6
Sp3g31470 Schrenkiella parvula HOM05D000811 ORTHO05D004743 3.1e-19 97.8 58 75.9
BcaB03g16590 Brassica carinata HOM05D000811 ORTHO05D004743 5.3e-19 97.1 58 75.9
CiPaw.07G057300 Carya illinoinensis HOM05D000811 ORTHO05D004743 5.3e-19 97.1 58 75.9
COL.COLO4_21930 Corchorus olitorius HOM05D000811 ORTHO05D004743 5.3e-19 97.1 58 75.9
Phvul.003G260800 Phaseolus vulgaris HOM05D000811 ORTHO05D004743 5.3e-19 97.1 58 75.9
THA.LOC104807488 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 5.3e-19 97.1 58 75.9
AL3G51190 Arabidopsis lyrata HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 74.1
AT2G18040 Arabidopsis thaliana HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 74.1
BolC6t36506H Brassica oleracea HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 75.9
Gohir.A10G097900 Gossypium hirsutum HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 77.6
Gohir.D10G090300 Gossypium hirsutum HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 77.6
Gorai.011G099300 Gossypium raimondii HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 77.6
HanXRQChr15g0482841 Helianthus annuus HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 77.6
Peaxi162Scf00799g00517 Petunia axillaris HOM05D000811 ORTHO05D004743 6.9e-19 96.7 58 74.1
DCAR_016616 Daucus carota HOM05D000811 ORTHO05D004743 1.2e-18 95.9 57 73.7
Gohir.D11G044800 Gossypium hirsutum HOM05D000811 ORTHO05D004743 1.2e-18 95.9 58 75.9
SGA_v2.0_scaffold32G13256 Striga asiatica HOM05D000811 ORTHO05D004743 1.2e-18 95.9 58 75.9
arahy.Tifrunner.gnm1.ann1.9YI44J Arachis hypogaea HOM05D007334 ORTHO05D004743 1.5e-18 95.5 62 72.6
C03p58940 Brassica napus HOM05D000811 ORTHO05D004743 1.5e-18 95.5 58 74.1
BolC3t18151H Brassica oleracea HOM05D000811 ORTHO05D004743 1.5e-18 95.5 58 74.1
Carub.0003s3219 Capsella rubella HOM05D000811 ORTHO05D004743 1.5e-18 95.5 58 72.4
Nn6g32304 Nelumbo nucifera HOM05D000811 ORTHO05D004743 1.5e-18 95.5 58 72.4
Oeu060412.1 Olea europaea HOM05D000811 ORTHO05D004743 1.5e-18 95.5 58 75.9
FAN09G3320 Fragaria x ananassa HOM05D000811 ORTHO05D004743 2.0e-18 95.1 58 72.4
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 2.6e-18 94.7 58 72.4
SGA_v2.0_scaffold58G20433 Striga asiatica HOM05D000811 ORTHO05D004743 2.6e-18 94.7 58 75.9
Actinidia27847 Actinidia chinensis HOM05D000811 ORTHO05D004743 3.4e-18 94.4 58 74.1
ATR0147G012 Amborella trichopoda HOM05D000811 ORTHO05D004743 3.4e-18 94.4 57 71.9
Cc07_g10610 Coffea canephora HOM05D000811 ORTHO05D004743 3.4e-18 94.4 58 75.9
MBI05_g26504_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 3.4e-18 94.4 57 71.9
FvH4_6g24550 Fragaria vesca HOM05D000811 ORTHO05D004743 4.5e-18 94.0 58 70.7
FAN02G2932 Fragaria x ananassa HOM05D000811 ORTHO05D004743 4.5e-18 94.0 58 70.7
FAN14G0683 Fragaria x ananassa HOM05D000811 ORTHO05D004743 4.5e-18 94.0 58 70.7
Psat4g098480 Pisum sativum HOM05D000811 ORTHO05D004743 4.5e-18 94.0 58 74.1
MSTRG.5435 Avicennia marina HOM05D000811 ORTHO05D004743 5.9e-18 93.6 58 72.4
Solyc02g062250.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 5.9e-18 93.6 58 74.1
PGSC0003DMG400019933 Solanum tuberosum HOM05D000811 ORTHO05D004743 5.9e-18 93.6 58 74.1
TPR.G30057 Trifolium pratense HOM05D000811 ORTHO05D004743 5.9e-18 93.6 58 72.4
vmacro18420 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 5.9e-18 93.6 58 72.4
Actinidia31003 Actinidia chinensis HOM05D000811 ORTHO05D004743 7.6e-18 93.2 58 75.9
Migut.B00125 Erythranthe guttata HOM05D000811 ORTHO05D004743 7.6e-18 93.2 58 72.4
Gohir.A11G041500 Gossypium hirsutum HOM05D000811 ORTHO05D004743 7.6e-18 93.2 58 74.1
Gorai.007G048100 Gossypium raimondii HOM05D000811 ORTHO05D004743 7.6e-18 93.2 58 74.1
unitig_0.g45 Utricularia gibba HOM05D000628 ORTHO05D001121 7.6e-18 93.2 58 74.1
Oeu062504.1 Olea europaea HOM05D000811 ORTHO05D004743 1.3e-17 92.4 58 75.9
FAN05G0499 Fragaria x ananassa HOM05D000811 ORTHO05D004743 2.2e-17 91.7 58 69.0
Medtr8g076070 Medicago truncatula HOM05D000811 ORTHO05D004743 2.2e-17 91.7 58 72.4
RcHm_v2.0_Chr3g0483651 Rosa chinensis HOM05D000811 ORTHO05D004743 2.2e-17 91.7 58 70.7
Sopen02g013220 Solanum pennellii HOM05D000811 ORTHO05D004743 2.9e-17 91.3 58 72.4
Oeu035303.1 Olea europaea HOM05D000811 ORTHO05D004743 3.8e-17 90.9 58 74.1
CDE05G3063 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 5.0e-17 90.5 58 70.7
Ca_22371_v3 Cicer arietinum L. HOM05D000811 ORTHO05D004743 5.0e-17 90.5 58 70.7
Rhsim05G0067500 Rhododendron simsii HOM05D000811 ORTHO05D004743 5.0e-17 90.5 58 69.0
HPP92_003523 Vanilla planifolia HOM05D000811 ORTHO05D004743 5.0e-17 90.5 58 67.2
CDE05G3463 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 6.5e-17 90.1 58 69.0
CAN.G1365.1 Capsicum annuum HOM05D000811 ORTHO05D004743 8.5e-17 89.7 58 69.0
Actinidia22989 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.1e-16 89.4 57 71.9
CDE09G0022 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 4.2e-16 87.4 58 67.2
CDE02G4615 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 9.3e-16 86.3 58 67.2
vmacro17410 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 9.3e-16 86.3 62 62.9
MBI07_g03816_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 1.6e-15 85.5 58 63.8
SMO146G0274 Selaginella moellendorffii HOM05D000811 ORTHO05D004743 1.6e-15 85.5 57 64.9
PSO210G3301 Papaver somniferum HOM05D000811 ORTHO05D004743 1.3e-14 82.4 58 69.0
Pp3c20_23120 Physcomitrium patens HOM05D000811 ORTHO05D004743 3.9e-14 80.9 57 64.9
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea HOM05D004782 ORTHO05D005498 6.7e-14 80.1 58 65.5
MBI04_g40115_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 6.7e-14 80.1 57 61.4
Os04g0118500 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 1.5e-13 79.0 58 62.1
Migut.H01149 Erythranthe guttata HOM05D000811 ORTHO05D004743 2.5e-13 78.2 58 60.3
unitig_699.g19711 Utricularia gibba HOM05D000811 ORTHO05D004743 5.7e-13 77.0 58 62.1
Zm00001eb419950 Zea mays HOM05D000811 ORTHO05D004743 5.7e-13 77.0 58 62.1
SalBow3G3608 Salvia bowleyana HOM05D000811 ORTHO05D004743 7.4e-13 76.6 58 58.6
Zm00001eb067280 Zea mays HOM05D000811 ORTHO05D004743 7.4e-13 76.6 58 62.1
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 9.7e-13 76.3 57 56.1
Pp3c10_25090 Physcomitrium patens HOM05D000811 ORTHO05D004743 9.7e-13 76.3 57 61.4
SEGI_07022 Sequoiadendron giganteum HOM05D000811 ORTHO05D004743 9.7e-13 76.3 56 60.7
Nitab4.5_0010885g0050 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.6e-12 75.5 57 57.9
MSTRG.2701 Avicennia marina HOM05D000811 ORTHO05D004743 2.8e-12 74.7 58 56.9
HPP92_002102 Vanilla planifolia HOM05D000811 ORTHO05D004743 3.7e-12 74.3 58 55.2
CBR_g552 Chara braunii HOM05D000811 ORTHO05D004743 1.2e-10 69.3 58 56.9
MCO04G419 Micromonas commoda HOM05D000811 ORTHO05D004743 2.0e-10 68.6 57 52.6
Actinidia00122 Actinidia chinensis HOM05D000811 ORTHO05D004743 7.7e-10 66.6 43 67.4
Actinidia20649 Actinidia chinensis HOM05D000811 ORTHO05D004743 7.7e-10 66.6 43 67.4
Atru.chr3.785 Acer truncatum HOM05D000811 ORTHO05D004743 8.5e-09 63.2 38 73.7
arahy.Tifrunner.gnm1.ann1.0S2HJN Arachis hypogaea HOM05D007334 ORTHO05D004743 1.2e-07 59.3 58 55.2


User provided reference genes

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