Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g122520 Amaranthus hybridus HOM05D000091 ORTHO05D018275 3.7e-103 378.3 194 100.0
EL10Ac6g15106 Beta vulgaris HOM05D000091 ORTHO05D009480 2.4e-22 109.8 124 50.8
AUR62003795 Chenopodium quinoa HOM05D000091 ORTHO05D009480 2.4e-22 109.8 139 46.8
AUR62002007 Chenopodium quinoa HOM05D000091 ORTHO05D009480 2.3e-20 103.2 139 44.6
CiPaw.03G142000 Carya illinoinensis HOM05D000091 ORTHO05D009480 3.6e-18 95.9 119 49.6
Actinidia28863 Actinidia chinensis HOM05D000091 ORTHO05D009480 4.0e-17 92.4 137 40.1
Migut.H02359 Erythranthe guttata HOM05D000091 ORTHO05D009480 7.6e-16 88.2 129 41.1
Cfa002660 Carpinus fangiana HOM05D000091 ORTHO05D009480 1.4e-14 84.0 116 45.7
Cfa002661 Carpinus fangiana HOM05D000091 ORTHO05D009480 1.4e-14 84.0 137 40.9
Lsat_1_v5_gn_5_48701 Lactuca sativa HOM05D000091 ORTHO05D009480 1.9e-14 83.6 139 35.3
Haze_24930 Corylus avellana HOM05D000091 ORTHO05D009480 4.2e-14 82.4 134 40.3
HanXRQChr15g0469851 Helianthus annuus HOM05D000091 ORTHO05D009480 4.2e-14 82.4 114 43.0
PSO541G3276 Papaver somniferum HOM05D000091 ORTHO05D009480 3.5e-13 79.3 108 44.4
PSO781G0217 Papaver somniferum HOM05D000091 ORTHO05D009480 7.8e-13 78.2 127 40.2
Ca_17738_v3 Cicer arietinum L. HOM05D000091 ORTHO05D009480 1.0e-12 77.8 107 43.9
ECA246G2555 Erigeron canadensis HOM05D000091 ORTHO05D009480 3.9e-12 75.9 125 33.6
SalBow3G1883 Salvia bowleyana HOM05D000091 ORTHO05D009480 1.5e-11 73.9 127 36.2
Aqoxy6G00795 Aquilegia oxysepala HOM05D000091 ORTHO05D009480 2.5e-11 73.2 141 38.3
Dinv21907 Davidia involucrata HOM05D000091 ORTHO05D009480 9.6e-11 71.2 134 35.1
Ciclev10025174m.g Citrus clementina HOM05D000091 ORTHO05D009480 2.1e-10 70.1 135 34.1
Psat7g054720 Pisum sativum HOM05D000091 ORTHO05D009480 8.1e-10 68.2 106 40.6
TPR.G9484 Trifolium pratense HOM05D000091 ORTHO05D004126 1.1e-09 67.8 121 34.7
Atru.chr6.1227 Acer truncatum HOM05D000091 ORTHO05D004126 1.4e-09 67.4 122 34.4
BcaC04g19319 Brassica carinata HOM05D000091 ORTHO05D009480 1.8e-09 67.0 142 35.9
Manes.10G102200 Manihot esculenta HOM05D000091 ORTHO05D004126 1.8e-09 67.0 119 36.1
PSO541G1389 Papaver somniferum HOM05D000091 ORTHO05D004126 1.8e-09 67.0 119 35.3
PSO675G8640 Papaver somniferum HOM05D000091 ORTHO05D004126 1.8e-09 67.0 119 35.3
Potri.007G112600 Populus trichocarpa HOM05D000091 ORTHO05D004126 1.8e-09 67.0 119 36.1
Medtr2g009340 Medicago truncatula HOM05D000091 ORTHO05D004126 2.4e-09 66.6 118 35.6
Psat1g214600 Pisum sativum HOM05D000091 ORTHO05D004126 2.4e-09 66.6 150 32.0
Hma1.2p1_1093F.1_g256080 Hydrangea macrophylla HOM05D000091 ORTHO05D004126 3.1e-09 66.2 143 31.5
COL.COLO4_32355 Corchorus olitorius HOM05D000091 ORTHO05D004126 4.0e-09 65.9 122 34.4
Lalb_Chr20g0122871 Lupinus albus HOM05D000091 ORTHO05D004126 4.0e-09 65.9 150 30.7
VMungo0251G1806 Vigna mungo HOM05D000091 ORTHO05D004126 4.0e-09 65.9 152 31.6
Manes.07G037100 Manihot esculenta HOM05D000091 ORTHO05D004126 5.3e-09 65.5 122 36.1
arahy.Tifrunner.gnm1.ann1.5Y2C3U Arachis hypogaea HOM05D000091 ORTHO05D004126 6.9e-09 65.1 126 33.3
FAN13G2241 Fragaria x ananassa HOM05D000091 ORTHO05D004126 6.9e-09 65.1 120 33.3
Manes.12G134700 Manihot esculenta HOM05D000091 ORTHO05D009480 6.9e-09 65.1 124 33.9
QL11p023808 Quercus lobata HOM05D000091 ORTHO05D004126 6.9e-09 65.1 122 34.4
arahy.Tifrunner.gnm1.ann1.ZKJP05 Arachis hypogaea HOM05D000091 ORTHO05D004126 9.0e-09 64.7 126 32.5
C09p67170 Brassica napus HOM05D000091 ORTHO05D009480 9.0e-09 64.7 142 35.2
CSS0047599 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D009480 9.0e-09 64.7 119 39.5
Duzib248G0007 Durio zibethinus HOM05D000091 ORTHO05D004126 9.0e-09 64.7 122 34.4
Glyma.13G258700 Glycine max HOM05D000091 ORTHO05D004126 9.0e-09 64.7 150 29.3
HanXRQChr11g0333371 Helianthus annuus HOM05D000091 ORTHO05D004126 9.0e-09 64.7 122 34.4
Lj5A232T95 Lonicera japonica HOM05D000091 ORTHO05D004126 9.0e-09 64.7 122 33.6
Lalb_Chr18g0060461 Lupinus albus HOM05D000091 ORTHO05D004126 9.0e-09 64.7 121 33.9
Prupe.8G067500 Prunus persica HOM05D000091 ORTHO05D004126 9.0e-09 64.7 122 33.6
Ca_00155_v3 Cicer arietinum L. HOM05D000091 ORTHO05D004126 1.2e-08 64.3 123 33.3
ECA236G2139 Erigeron canadensis HOM05D000091 ORTHO05D004126 1.2e-08 64.3 136 32.4
Glyma.15G056500 Glycine max HOM05D000091 ORTHO05D004126 1.2e-08 64.3 150 28.7
Gohir.D02G199600 Gossypium hirsutum HOM05D000091 ORTHO05D004126 1.2e-08 64.3 122 34.4
Gorai.005G224200 Gossypium raimondii HOM05D000091 ORTHO05D004126 1.2e-08 64.3 122 34.4
Sabra07G0092000 Salix brachista HOM05D000091 ORTHO05D004126 1.2e-08 64.3 143 32.2
arahy.Tifrunner.gnm1.ann1.4T09L2 Arachis hypogaea HOM05D000091 ORTHO05D004126 1.5e-08 63.9 119 33.6
arahy.Tifrunner.gnm1.ann1.PKZ6FU Arachis hypogaea HOM05D000091 ORTHO05D004126 1.5e-08 63.9 119 33.6
Gohir.A03G175800 Gossypium hirsutum HOM05D000091 ORTHO05D004126 1.5e-08 63.9 122 34.4
Nitab4.5_0002650g0080 Nicotiana tabacum HOM05D000091 ORTHO05D004126 1.5e-08 63.9 145 31.0
RcHm_v2.0_Chr6g0271301 Rosa chinensis HOM05D000091 ORTHO05D004126 1.5e-08 63.9 122 33.6
TAR381G0295 Trochodendron aralioides HOM05D000091 ORTHO05D009480 1.5e-08 63.9 138 33.3
vmacro01850 Vaccinium macrocarpon HOM05D000091 ORTHO05D004126 1.5e-08 63.9 146 30.8
ClCG10G009530 Citrullus lanatus HOM05D000091 ORTHO05D004126 2.0e-08 63.5 143 30.1
Medtr4g093850 Medicago truncatula HOM05D000091 ORTHO05D004126 2.0e-08 63.5 122 34.4
CiPaw.05G031300 Carya illinoinensis HOM05D000091 ORTHO05D004126 2.6e-08 63.2 151 29.1
Ciclev10004479m.g Citrus clementina HOM05D000091 ORTHO05D004126 2.6e-08 63.2 119 32.8
FvH4_5g25720 Fragaria vesca HOM05D000091 ORTHO05D004126 2.6e-08 63.2 120 32.5
FAN04G2272 Fragaria x ananassa HOM05D000091 ORTHO05D004126 2.6e-08 63.2 120 32.5
FAN08G3536 Fragaria x ananassa HOM05D000091 ORTHO05D004126 2.6e-08 63.2 120 32.5
Lsat_1_v5_gn_7_83740 Lactuca sativa HOM05D000091 ORTHO05D004126 2.6e-08 63.2 126 33.3
Lj4g0014549 Lotus japonicus HOM05D000091 ORTHO05D004126 2.6e-08 63.2 151 29.8
Nitab4.5_0001264g0150 Nicotiana tabacum HOM05D000091 ORTHO05D004126 2.6e-08 63.2 145 31.0
Phvul.002G211400 Phaseolus vulgaris HOM05D000091 ORTHO05D004126 2.6e-08 63.2 152 30.9
RcHm_v2.0_Chr7g0216061 Rosa chinensis HOM05D000091 ORTHO05D004126 2.6e-08 63.2 120 32.5
TPR.G2840 Trifolium pratense HOM05D000091 ORTHO05D004126 2.6e-08 63.2 123 34.1
TWI23G0226 Tripterygium wilfordii HOM05D000091 ORTHO05D004126 2.6e-08 63.2 122 34.4
Nitab4.5_0000313g0110 Nicotiana tabacum HOM05D000091 ORTHO05D004126 3.4e-08 62.8 122 32.8
Nitab4.5_0008998g0040 Nicotiana tabacum HOM05D000091 ORTHO05D004126 3.4e-08 62.8 122 32.8
Phvul.006G203600 Phaseolus vulgaris HOM05D000091 ORTHO05D004126 3.4e-08 62.8 150 28.7
PGSC0003DMG400002400 Solanum tuberosum HOM05D000091 ORTHO05D004126 3.4e-08 62.8 119 32.8
Thecc.02G132200 Theobroma cacao HOM05D000091 ORTHO05D004126 3.4e-08 62.8 122 33.6
VMungo0540G2352 Vigna mungo HOM05D000091 ORTHO05D004126 3.4e-08 62.8 150 28.7
BolC9t59488H Brassica oleracea HOM05D000091 ORTHO05D009480 4.5e-08 62.4 146 34.9
Lalb_Chr15g0090351 Lupinus albus HOM05D000091 ORTHO05D004126 4.5e-08 62.4 121 33.1
PGSC0003DMG400033569 Solanum tuberosum HOM05D000091 ORTHO05D004126 4.5e-08 62.4 143 32.9
TWI59G0183 Tripterygium wilfordii HOM05D000091 ORTHO05D004126 4.5e-08 62.4 122 32.8
Actinidia04401 Actinidia chinensis HOM05D000091 ORTHO05D004126 5.8e-08 62.0 143 30.8
CSS0012256 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D004126 5.8e-08 62.0 119 33.6
CSS0034940 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D004126 5.8e-08 62.0 119 33.6
Ca_18371_v3 Cicer arietinum L. HOM05D000091 ORTHO05D004126 5.8e-08 62.0 153 29.4
Glyma.08G069800 Glycine max HOM05D000091 ORTHO05D004126 5.8e-08 62.0 153 30.7
Peaxi162Scf00003g03341 Petunia axillaris HOM05D000091 ORTHO05D004126 5.8e-08 62.0 153 30.1
Potri.007G093000 Populus trichocarpa HOM05D000091 ORTHO05D009480 5.8e-08 62.0 137 32.1
Sopen01g048130 Solanum pennellii HOM05D000091 ORTHO05D004126 5.8e-08 62.0 143 32.9
AUR62012898 Chenopodium quinoa HOM05D000091 ORTHO05D004126 7.6e-08 61.6 139 30.9
Duzib132G1054 Durio zibethinus HOM05D000091 ORTHO05D004126 7.6e-08 61.6 122 32.8
MD10G1053800 Malus domestica HOM05D000091 ORTHO05D004126 7.6e-08 61.6 122 32.0
Oeu056608.1 Olea europaea HOM05D000091 ORTHO05D009480 7.6e-08 61.6 129 32.6
MSTRG.27811 Avicennia marina HOM05D000091 ORTHO05D004126 9.9e-08 61.2 144 29.9
BcaB08g37124 Brassica carinata HOM05D000091 ORTHO05D009480 9.9e-08 61.2 146 34.9
CAN.G1861.3 Capsicum annuum HOM05D000091 ORTHO05D004126 9.9e-08 61.2 120 32.5
AUR62027122 Chenopodium quinoa HOM05D000091 ORTHO05D004126 9.9e-08 61.2 139 30.9
Nn1g05501 Nelumbo nucifera HOM05D000091 ORTHO05D004126 9.9e-08 61.2 122 32.8
RhsimUnG0008300 Rhododendron simsii HOM05D000091 ORTHO05D004126 9.9e-08 61.2 146 29.5
RhsimUnG0106100 Rhododendron simsii HOM05D000091 ORTHO05D004126 9.9e-08 61.2 146 29.5
Solyc10g047530.2 Solanum lycopersicum HOM05D000091 ORTHO05D004126 9.9e-08 61.2 119 31.9
Sopen10g017810 Solanum pennellii HOM05D000091 ORTHO05D004126 9.9e-08 61.2 119 31.9
FAN18G3787 Fragaria x ananassa HOM05D000091 ORTHO05D004126 1.3e-07 60.8 120 31.7
Peaxi162Scf00299g00849 Petunia axillaris HOM05D000091 ORTHO05D004126 1.3e-07 60.8 143 30.1
TWI74G1043 Tripterygium wilfordii HOM05D000091 ORTHO05D009480 1.3e-07 60.8 136 29.4
TAR628G1646 Trochodendron aralioides HOM05D000091 ORTHO05D004126 1.3e-07 60.8 122 31.1
arahy.Tifrunner.gnm1.ann1.GKWH5W Arachis hypogaea HOM05D000091 ORTHO05D009480 1.7e-07 60.5 103 37.9
CANSAT11G0467 Cannabis sativa HOM05D000091 ORTHO05D004126 1.7e-07 60.5 120 33.3
Dinv15986 Davidia involucrata HOM05D000091 ORTHO05D004126 1.7e-07 60.5 143 30.1
MBI06_g42715_MAGBIO Magnolia biondii HOM05D000091 ORTHO05D004126 1.7e-07 60.5 123 31.7
PSO210G2717 Papaver somniferum HOM05D000091 ORTHO05D004126 1.7e-07 60.5 148 29.7
Psat7g100600 Pisum sativum HOM05D000091 ORTHO05D004126 1.7e-07 60.5 130 31.5
Sabra07G0077100 Salix brachista HOM05D000091 ORTHO05D009480 1.7e-07 60.5 137 32.8
Solyc01g105680.4 Solanum lycopersicum HOM05D000091 ORTHO05D004126 1.7e-07 60.5 143 32.2
arahy.Tifrunner.gnm1.ann1.IPHF02 Arachis hypogaea HOM05D000091 ORTHO05D009480 2.2e-07 60.1 103 36.9
Sed0026147 Sechium edule HOM05D000091 ORTHO05D004126 2.2e-07 60.1 151 28.5
TAR625G0011 Trochodendron aralioides HOM05D000091 ORTHO05D004126 2.2e-07 60.1 119 31.9
Atru.chr4.62 Acer truncatum HOM05D000091 ORTHO05D009480 2.9e-07 59.7 136 30.9
Haze_10555 Corylus avellana HOM05D000091 ORTHO05D004126 2.9e-07 59.7 122 31.1
Duzib264G1100 Durio zibethinus HOM05D000091 ORTHO05D009480 2.9e-07 59.7 136 30.9
MD05G1047100 Malus domestica HOM05D000091 ORTHO05D004126 2.9e-07 59.7 133 30.8
Cfa005694 Carpinus fangiana HOM05D000091 ORTHO05D004126 3.8e-07 59.3 122 31.1
DCAR_010086 Daucus carota HOM05D000091 ORTHO05D009480 3.8e-07 59.3 124 33.1
Eucgr.G00960 Eucalyptus grandis HOM05D000091 ORTHO05D004126 3.8e-07 59.3 146 29.5
Lj6g0005625 Lotus japonicus HOM05D000091 ORTHO05D004126 3.8e-07 59.3 121 31.4
SalBow8G5561 Salvia bowleyana HOM05D000091 ORTHO05D004126 3.8e-07 59.3 123 30.9
GSVIVG01012508001 Vitis vinifera HOM05D000091 ORTHO05D004126 3.8e-07 59.3 105 37.1
CSS0047297 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D004126 4.9e-07 58.9 143 30.1
Lj9A348T68 Lonicera japonica HOM05D000091 ORTHO05D004126 4.9e-07 58.9 143 30.1
PGR042G2747 Punica granatum HOM05D000091 ORTHO05D004126 6.4e-07 58.5 127 31.5
ATR0022G045 Amborella trichopoda HOM05D000091 ORTHO05D004126 8.4e-07 58.2 134 31.3
arahy.Tifrunner.gnm1.ann1.XK1BEG Arachis hypogaea HOM05D000091 ORTHO05D004126 8.4e-07 58.2 114 33.3
Potri.017G048200 Populus trichocarpa HOM05D000091 ORTHO05D004126 8.4e-07 58.2 150 30.7
Aqoxy6G01465 Aquilegia oxysepala HOM05D000091 ORTHO05D004126 1.1e-06 57.8 126 30.2
Nn5g29942 Nelumbo nucifera HOM05D000091 ORTHO05D004126 1.1e-06 57.8 123 31.7
SalBow6G1523 Salvia bowleyana HOM05D000091 ORTHO05D004126 1.1e-06 57.8 105 33.3
Ah.01g007500 Amaranthus hybridus HOM05D000091 ORTHO05D004126 1.4e-06 57.4 141 28.4
DCAR_029190 Daucus carota HOM05D000091 ORTHO05D004126 1.4e-06 57.4 122 31.1
Gohir.D03G037300 Gossypium hirsutum HOM05D000091 ORTHO05D009480 1.4e-06 57.4 123 30.9
Lalb_Chr13g0295971 Lupinus albus HOM05D000091 ORTHO05D009480 1.4e-06 57.4 105 37.1
Oeu022085.1 Olea europaea HOM05D000091 ORTHO05D004126 1.4e-06 57.4 122 30.3
PSO170G4338 Papaver somniferum HOM05D000091 ORTHO05D004126 1.4e-06 57.4 154 28.6
Sabra17G0032700 Salix brachista HOM05D000091 ORTHO05D004126 1.4e-06 57.4 119 31.9
Sabra17G0034000 Salix brachista HOM05D000091 ORTHO05D004126 1.4e-06 57.4 119 31.9
THA.LOC104799835 Tarenaya hassleriana HOM05D000091 ORTHO05D004126 1.4e-06 57.4 133 29.3
DCAR_021887 Daucus carota HOM05D000091 ORTHO05D004126 1.9e-06 57.0 119 31.9
ClCG09G015920 Citrullus lanatus HOM05D000091 ORTHO05D004126 2.4e-06 56.6 151 28.5
Duzib147G1469 Durio zibethinus HOM05D000091 ORTHO05D009480 2.4e-06 56.6 125 32.0
Glyma.08G135600 Glycine max HOM05D000091 ORTHO05D009480 2.4e-06 56.6 106 34.9
Gohir.A02G143200 Gossypium hirsutum HOM05D000091 ORTHO05D009480 2.4e-06 56.6 127 32.3
Cc02_g21030 Coffea canephora HOM05D000091 ORTHO05D004126 3.2e-06 56.2 143 28.7
CsaV3_7G007040 Cucumis sativus L. HOM05D000091 ORTHO05D004126 3.2e-06 56.2 150 28.0
Lsat_1_v5_gn_5_109081 Lactuca sativa HOM05D000091 ORTHO05D004126 3.2e-06 56.2 118 29.7
Sc16g0005020 Simmondsia chinensis HOM05D000091 ORTHO05D018275 3.2e-06 56.2 70 42.9
MELO3C018590.2 Cucumis melo HOM05D000091 ORTHO05D004126 4.2e-06 55.8 151 27.8
Migut.N01090 Erythranthe guttata HOM05D000091 ORTHO05D004126 4.2e-06 55.8 160 29.4
VMungo0251G3306 Vigna mungo HOM05D000091 ORTHO05D009480 4.2e-06 55.8 104 34.6
AL8G41690 Arabidopsis lyrata HOM05D000091 ORTHO05D004126 5.4e-06 55.5 142 29.6
Gohir.A13G070500 Gossypium hirsutum HOM05D000091 ORTHO05D004126 5.4e-06 55.5 120 30.8
AT5G64330 Arabidopsis thaliana HOM05D000091 ORTHO05D004126 7.1e-06 55.1 142 29.6
MSTRG.16608 Avicennia marina HOM05D000091 ORTHO05D004126 7.1e-06 55.1 122 32.8
Migut.B00566 Erythranthe guttata HOM05D000091 ORTHO05D004126 7.1e-06 55.1 116 31.0
Gohir.D13G051200 Gossypium hirsutum HOM05D000091 ORTHO05D004126 7.1e-06 55.1 120 30.8
Gorai.013G057300 Gossypium raimondii HOM05D000091 ORTHO05D004126 7.1e-06 55.1 120 30.8
Ah.01g024040 Amaranthus hybridus HOM05D000091 ORTHO05D004126 9.3e-06 54.7 127 29.1
Hund06155 Selenicereus undatus HOM05D000091 ORTHO05D004126 9.3e-06 54.7 145 29.0


User provided reference genes

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