Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 3.0e-81 305.1 147 100.0
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.0e-68 263.5 148 86.5
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.9e-68 261.9 148 86.5
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 8.2e-63 243.8 147 81.6
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 5.1e-57 224.6 138 80.4
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.2e-53 213.4 147 70.1
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.3e-52 209.9 161 64.0
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 3.8e-52 208.4 148 69.6
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 2.5e-51 205.7 140 68.6
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 5.5e-51 204.5 125 75.2
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 5.5e-51 204.5 125 75.2
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 7.9e-50 200.7 131 71.0
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.0e-49 200.3 143 67.1
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 2.3e-49 199.1 117 74.4
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.3e-49 199.1 128 73.4
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 3.9e-49 198.4 148 63.5
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 3.9e-49 198.4 117 75.2
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 5.1e-49 198.0 138 68.8
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 5.1e-49 198.0 122 73.8
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 1.1e-48 196.8 114 77.2
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 1.5e-48 196.4 110 80.0
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 2.0e-48 196.1 148 65.5
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 3.3e-48 195.3 133 69.2
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 3.3e-48 195.3 132 66.7
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 4.4e-48 194.9 130 73.1
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 4.4e-48 194.9 116 75.0
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 5.7e-48 194.5 136 67.6
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 5.7e-48 194.5 117 76.1
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 5.7e-48 194.5 117 76.1
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 5.7e-48 194.5 117 76.9
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 5.7e-48 194.5 154 60.4
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 9.7e-48 193.7 138 65.2
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 1.3e-47 193.4 136 67.6
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.7e-47 193.0 137 69.3
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.7e-47 193.0 139 69.1
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 1.7e-47 193.0 138 66.7
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 2.2e-47 192.6 121 71.1
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 2.2e-47 192.6 142 66.9
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 2.8e-47 192.2 110 77.3
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 3.7e-47 191.8 133 70.7
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 3.7e-47 191.8 137 67.9
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 3.7e-47 191.8 133 70.7
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 3.7e-47 191.8 108 77.8
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 3.7e-47 191.8 132 68.9
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 8.2e-47 190.7 116 71.6
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 8.2e-47 190.7 157 61.8
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 1.1e-46 190.3 145 65.5
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.4e-46 189.9 115 74.8
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 2.4e-46 189.1 125 71.2
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.4e-46 189.1 125 71.2
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.4e-46 189.1 125 71.2
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 2.4e-46 189.1 115 73.9
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 2.4e-46 189.1 115 73.9
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 2.4e-46 189.1 154 62.3
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 2.4e-46 189.1 127 69.3
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 3.1e-46 188.7 114 72.8
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 3.1e-46 188.7 142 64.8
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 3.1e-46 188.7 126 70.6
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 3.1e-46 188.7 144 64.6
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 4.1e-46 188.3 142 65.5
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 4.1e-46 188.3 142 64.8
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 4.1e-46 188.3 138 66.7
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 5.3e-46 188.0 142 65.5
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 5.3e-46 188.0 115 72.2
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 7.0e-46 187.6 136 64.7
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 7.0e-46 187.6 123 68.3
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 7.0e-46 187.6 109 78.0
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 1.2e-45 186.8 117 70.9
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 1.2e-45 186.8 108 79.6
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 1.2e-45 186.8 155 61.3
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 2.0e-45 186.0 139 61.9
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 2.0e-45 186.0 193 54.9
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 3.4e-45 185.3 110 71.8
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 4.5e-45 184.9 137 62.8
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 5.9e-45 184.5 126 69.0
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 7.7e-45 184.1 153 61.4
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 1.0e-44 183.7 142 64.1
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.0e-44 183.7 136 62.5
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 1.0e-44 183.7 119 72.3
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 1.3e-44 183.3 108 75.9
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 5.0e-44 181.4 124 66.1
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 6.5e-44 181.0 137 62.0
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 1.4e-43 179.9 119 68.9
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.9e-43 179.5 110 71.8
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 1.9e-43 179.5 113 74.3
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 9.4e-43 177.2 115 67.8
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 3.6e-42 175.3 123 65.9
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 8.0e-42 174.1 120 68.3
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 1.0e-41 173.7 135 60.7
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 1.0e-41 173.7 116 69.8
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 5.2e-41 171.4 165 51.5
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 8.8e-41 170.6 136 62.5
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 8.8e-41 170.6 143 58.7
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 2.0e-40 169.5 113 66.4
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.8e-39 165.6 113 69.9
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 3.7e-39 165.2 157 56.7
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 4.8e-39 164.9 140 58.6
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 4.1e-38 161.8 108 63.9
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.6e-34 149.8 95 71.6
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.1e-34 149.4 95 71.6
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 2.1e-34 149.4 143 52.4
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 1.0e-33 147.1 128 55.5
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 6.7e-33 144.4 111 56.8
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 4.1e-30 135.2 111 55.9
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 7.0e-30 134.4 123 48.8
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 6.8e-25 117.9 90 65.6
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 1.5e-24 116.7 108 50.9
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 2.8e-23 112.5 96 55.2
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 3.1e-22 109.0 88 64.8
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 4.5e-21 105.1 70 65.7
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 3.8e-20 102.1 61 72.1
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 2.5e-19 99.4 128 43.8
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.8e-14 83.2 53 69.8
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 2.4e-14 82.8 53 69.8
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 7.0e-14 81.3 48 70.8
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 9.2e-14 80.9 53 67.9
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 1.6e-13 80.1 59 62.7
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 5.9e-13 78.2 45 77.8
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 5.9e-13 78.2 51 68.6
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 2.3e-12 76.3 59 61.0
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.5e-11 73.6 45 71.1
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 3.6e-10 68.9 102 37.3
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 1.5e-08 63.5 77 37.7


User provided reference genes

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