Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 2.7e-227 791.6 371 100.0
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 4.2e-225 784.3 371 98.9
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 6.8e-199 697.2 373 86.1
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 3.5e-195 684.9 375 84.3
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 1.5e-193 679.5 375 84.5
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 3.1e-191 671.8 372 82.8
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 4.9e-189 664.5 372 82.0
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 2.7e-187 658.7 391 79.0
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 4.6e-187 657.9 373 80.2
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 1.3e-186 656.4 372 79.6
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 8.6e-186 653.7 371 79.8
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 2.5e-185 652.1 372 80.6
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 5.6e-185 651.0 374 80.2
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.2e-184 649.8 373 79.1
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 1.6e-184 649.4 373 80.4
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.1e-184 649.0 373 79.1
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 6.2e-184 647.5 372 79.6
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 8.1e-184 647.1 373 78.6
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 3.1e-183 645.2 370 79.5
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 2.0e-182 642.5 373 78.8
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 5.8e-182 641.0 373 78.8
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 1.3e-181 639.8 370 79.5
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 2.2e-181 639.0 371 79.0
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 6.4e-181 637.5 374 78.6
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 6.4e-181 637.5 379 78.1
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 8.4e-181 637.1 369 79.1
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 8.4e-181 637.1 366 79.0
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 1.4e-180 636.3 373 78.8
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 7.1e-180 634.0 383 77.5
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 7.1e-180 634.0 371 78.2
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.2e-179 633.3 372 78.5
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 1.2e-179 633.3 373 76.9
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 2.7e-179 632.1 371 77.9
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 3.5e-179 631.7 369 78.9
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 4.6e-179 631.3 371 77.9
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 4.6e-179 631.3 369 78.9
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 7.8e-179 630.6 371 78.2
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 7.8e-179 630.6 373 78.8
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 1.3e-178 629.8 373 78.3
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 1.7e-178 629.4 374 77.5
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 3.0e-178 628.6 372 77.4
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 3.9e-178 628.2 372 77.7
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 5.1e-178 627.9 368 77.4
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 8.7e-178 627.1 367 78.5
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 1.9e-177 625.9 372 76.3
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 2.5e-177 625.5 372 78.5
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 5.6e-177 624.4 373 75.9
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 7.3e-177 624.0 373 75.6
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 4.8e-176 621.3 368 76.9
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 4.8e-176 621.3 372 75.3
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 1.2e-174 616.7 373 75.9
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 1.2e-174 616.7 373 75.9
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 1.5e-174 616.3 374 75.1
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 2.6e-174 615.5 373 75.6
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 2.6e-174 615.5 372 76.6
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 7.6e-174 614.0 373 73.5
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 9.9e-174 613.6 370 75.7
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.3e-173 613.2 371 76.8
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 3.8e-173 611.7 374 75.7
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 3.8e-173 611.7 371 75.2
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 4.9e-173 611.3 372 74.2
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 6.4e-173 610.9 367 75.5
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 1.1e-172 610.1 369 75.3
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 2.4e-172 609.0 373 74.5
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 3.2e-172 608.6 378 74.6
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 5.4e-172 607.8 373 73.5
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 7.1e-172 607.4 373 73.2
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 4.6e-171 604.7 372 73.9
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 7.9e-171 604.0 371 75.2
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.7e-170 602.8 373 73.2
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 1.7e-170 602.8 357 77.3
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 6.6e-170 600.9 367 74.9
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 6.6e-170 600.9 367 73.8
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 1.5e-169 599.7 371 73.6
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 1.5e-169 599.7 372 73.4
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 1.5e-169 599.7 371 73.0
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 1.3e-168 596.7 369 74.3
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 1.6e-168 596.3 372 74.2
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 3.6e-168 595.1 366 74.9
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 4.8e-168 594.7 366 73.8
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 1.1e-167 593.6 371 73.6
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 1.4e-167 593.2 374 72.2
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 1.8e-167 592.8 371 73.0
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 5.3e-167 591.3 458 63.1
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 6.9e-167 590.9 372 73.4
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 6.9e-167 590.9 383 72.1
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 9.0e-167 590.5 372 73.1
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 9.0e-167 590.5 367 73.6
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 2.0e-166 589.3 370 73.8
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 2.6e-166 589.0 401 68.6
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 3.4e-166 588.6 367 73.0
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 3.4e-166 588.6 367 73.0
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 7.6e-166 587.4 344 78.2
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 6.4e-165 584.3 368 73.1
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 1.9e-164 582.8 420 66.9
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 3.2e-164 582.0 368 73.4
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 3.5e-163 578.6 380 72.4
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 1.0e-162 577.0 372 70.7
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 2.3e-162 575.9 369 71.5
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 3.9e-162 575.1 373 71.0
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 2.5e-161 572.4 373 71.3
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 9.6e-161 570.5 346 76.9
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 3.1e-159 565.5 403 67.5
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 2.0e-158 562.8 406 66.7
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 7.6e-158 560.8 374 68.4
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 4.9e-157 558.1 371 70.4
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 5.5e-156 554.7 372 70.4
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 3.5e-155 552.0 371 66.6
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 9.0e-151 537.3 374 66.3
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 1.5e-150 536.6 371 66.0
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 2.0e-150 536.2 370 68.6
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 2.2e-149 532.7 370 65.4
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 2.2e-149 532.7 360 67.8
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 1.9e-148 529.6 374 64.4
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 9.3e-148 527.3 304 79.6
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 1.3e-146 523.5 365 66.3
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 6.1e-139 498.0 411 58.9
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 4.7e-131 471.9 293 71.7
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 3.9e-130 468.8 371 63.1
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 2.6e-129 466.1 388 58.5
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 4.7e-123 445.3 274 74.5
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 1.3e-104 384.0 385 51.2
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 1.7e-104 383.6 344 57.6
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 1.2e-102 377.5 216 77.3
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 6.1e-99 365.2 222 74.3
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 1.4e-98 364.0 373 52.0
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.0e-98 362.5 250 69.6
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 2.2e-96 356.7 380 48.2
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.1e-95 354.4 221 74.7
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 2.0e-86 323.6 381 44.9
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 4.3e-84 315.8 403 43.7
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 4.7e-83 312.4 196 75.0
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.7e-80 302.8 165 80.6
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 1.1e-74 284.6 170 76.5
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 9.9e-65 251.5 171 71.3
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 6.2e-43 179.1 93 80.6
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 1.8e-42 177.6 477 28.1
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 8.7e-37 158.7 129 65.9
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 1.7e-32 144.4 109 64.2
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 1.1e-31 141.7 102 66.7
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 2.1e-30 137.5 78 79.5
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 1.1e-28 131.7 92 68.5
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 5.0e-24 116.3 335 27.5
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 1.7e-16 91.3 163 35.6
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 2.7e-14 84.0 43 88.4
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 4.7e-14 83.2 47 78.7
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 3.0e-13 80.5 45 77.8
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 8.8e-13 79.0 46 78.3
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 2.8e-11 73.9 40 80.0


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