Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g118950 Amaranthus hybridus HOM05D010230 ORTHO05D012432 0.0e+00 1291.9 663 100.0
Ah.02g119080 Amaranthus hybridus HOM05D010230 ORTHO05D012432 1.8e-218 763.1 663 66.5
Ah.02g119020 Amaranthus hybridus HOM05D010230 ORTHO05D012432 2.6e-177 626.3 313 96.2
Ah.02g119010 Amaranthus hybridus HOM05D010230 ORTHO05D012432 4.3e-135 486.1 235 97.9
Ah.02g119030 Amaranthus hybridus HOM05D010230 ORTHO05D012432 2.1e-134 483.8 235 97.4
AUR62023833 Chenopodium quinoa HOM05D010230 ORTHO05D012432 6.9e-93 345.9 699 35.1
AUR62037400 Chenopodium quinoa HOM05D010230 ORTHO05D012432 6.5e-67 259.6 670 29.9
TPR.G52 Trifolium pratense HOM05D010230 ORTHO05D012432 1.1e-63 248.8 264 49.6
AUR62043555 Chenopodium quinoa HOM05D010230 ORTHO05D012432 1.3e-62 245.4 411 38.0
Ah.08g220090 Amaranthus hybridus HOM05D010230 ORTHO05D012432 1.7e-62 245.0 655 28.2
TPR.G36814 Trifolium pratense HOM05D010230 ORTHO05D012432 5.0e-59 233.4 397 37.5
Ah.13g066040 Amaranthus hybridus HOM05D010230 ORTHO05D012432 9.1e-53 212.6 689 26.1
TPR.G29587 Trifolium pratense HOM05D010230 ORTHO05D012432 3.7e-46 190.7 336 35.4
TPR.G18004 Trifolium pratense HOM05D010230 ORTHO05D012432 6.5e-43 179.9 300 33.7
Ah.01g015000 Amaranthus hybridus HOM05D010230 ORTHO05D012432 3.6e-33 147.5 117 65.0
AUR62040154 Chenopodium quinoa HOM05D010230 ORTHO05D005845 8.0e-33 146.4 242 36.8
Ah.12g061110 Amaranthus hybridus HOM05D010230 ORTHO05D012432 4.4e-31 140.6 237 38.0
TPR.G10790 Trifolium pratense HOM05D010230 ORTHO05D012432 1.4e-29 135.6 161 49.1
TPR.G36359 Trifolium pratense HOM05D010230 ORTHO05D012432 5.8e-23 113.6 177 36.2
AUR62019858 Chenopodium quinoa HOM05D015386 ORTHO05D012432 2.0e-20 105.1 602 22.3
AUR62022102 Chenopodium quinoa HOM05D000025 ORTHO05D021209 3.5e-20 104.4 227 30.8
TPR.G15606 Trifolium pratense HOM05D001007 ORTHO05D002932 6.0e-20 103.6 183 30.6
DCAR_004629 Daucus carota HOM05D015386 ORTHO05D020422 3.9e-19 100.9 268 33.2
EL10Ac7g16017 Beta vulgaris HOM05D011280 ORTHO05D013414 1.1e-18 99.4 242 31.0
AUR62039156 Chenopodium quinoa HOM05D015386 ORTHO05D020422 2.5e-18 98.2 267 29.6
EL10Ac8g20204 Beta vulgaris HOM05D015386 ORTHO05D012432 4.3e-18 97.4 511 21.5
AUR62020145 Chenopodium quinoa HOM05D000574 ORTHO05D002645 5.6e-18 97.1 233 29.2
AUR62043597 Chenopodium quinoa HOM05D015386 ORTHO05D020422 1.4e-16 92.4 569 22.7
DCAR_000884 Daucus carota HOM05D015386 ORTHO05D020422 1.8e-16 92.0 267 28.1
AUR62043598 Chenopodium quinoa HOM05D015386 ORTHO05D020422 7.5e-15 86.7 240 30.8
DCAR_026345 Daucus carota HOM05D011280 ORTHO05D013414 1.3e-14 85.9 214 30.8
SGA_v2.0_scaffold63G21751 Striga asiatica HOM05D010230 ORTHO05D012432 1.3e-14 85.9 324 30.6
AUR62020195 Chenopodium quinoa HOM05D026522 ORTHO05D021209 1.4e-13 82.4 149 31.5
AUR62009540 Chenopodium quinoa HOM05D011280 ORTHO05D013414 4.6e-12 77.4 175 29.1
Ah.04g166200 Amaranthus hybridus HOM05D008244 ORTHO05D009402 6.0e-12 77.0 235 25.5
AUR62009640 Chenopodium quinoa HOM05D011280 ORTHO05D013414 1.0e-11 76.3 217 28.1
EL10Ac4g07678 Beta vulgaris HOM05D008244 ORTHO05D009402 1.3e-11 75.9 236 28.0
AUR62001694 Chenopodium quinoa HOM05D011280 ORTHO05D013414 2.3e-11 75.1 287 24.7
AUR62016499 Chenopodium quinoa HOM05D011280 ORTHO05D013414 5.1e-11 73.9 264 27.3
AUR62028660 Chenopodium quinoa HOM05D010230 ORTHO05D012432 3.3e-10 71.2 115 37.4
AUR62039157 Chenopodium quinoa HOM05D015386 ORTHO05D020422 7.3e-10 70.1 184 29.3
Ah.09g236600 Amaranthus hybridus HOM05D011280 ORTHO05D013414 9.5e-10 69.7 205 24.9
AUR62020324 Chenopodium quinoa HOM05D008244 ORTHO05D009402 4.7e-09 67.4 233 23.6
AUR62001681 Chenopodium quinoa HOM05D011280 ORTHO05D013414 6.2e-09 67.0 175 28.6
AUR62020211 Chenopodium quinoa HOM05D011280 ORTHO05D013414 1.8e-08 65.5 115 32.2
TAR636G3080 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.9e-06 58.2 240 27.1
Hund28831 Selenicereus undatus HOM05D026522 ORTHO05D021209 3.7e-06 57.8 228 26.3
Hund28833 Selenicereus undatus HOM05D026522 ORTHO05D021209 3.7e-06 57.8 228 26.3
TAR636G0746 Trochodendron aralioides HOM05D008244 ORTHO05D009402 3.7e-06 57.8 229 26.2
AUR62020088 Chenopodium quinoa HOM05D011280 ORTHO05D013414 4.9e-06 57.4 186 25.3


User provided reference genes

Program Settings