Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g115840 Amaranthus hybridus HOM05D002174 ORTHO05D005941 1.6e-25 118.6 60 100.0
Hund14299 Selenicereus undatus HOM05D002174 ORTHO05D005941 3.0e-19 97.8 60 81.7
Ah.12g058520 Amaranthus hybridus HOM05D002174 ORTHO05D005941 2.5e-18 94.7 60 76.7
AUR62030424 Chenopodium quinoa HOM05D002174 ORTHO05D005941 3.3e-18 94.4 60 75.0
EL10Ac5g12576 Beta vulgaris HOM05D002174 ORTHO05D005941 1.2e-17 92.4 60 73.3
Haze_12046 Corylus avellana HOM05D002174 ORTHO05D005941 2.2e-14 81.6 66 65.2
Cfa009013 Carpinus fangiana HOM05D002174 ORTHO05D005941 6.4e-14 80.1 66 63.6
MELO3C020637.2 Cucumis melo HOM05D002174 ORTHO05D005941 6.4e-14 80.1 66 62.1
Sed0016872 Sechium edule HOM05D002174 ORTHO05D005941 1.4e-13 79.0 66 60.6
Manes.01G174000 Manihot esculenta HOM05D002174 ORTHO05D005941 9.2e-13 76.3 66 60.6
Peaxi162Scf00587g00410 Petunia axillaris HOM05D002174 ORTHO05D005941 9.2e-13 76.3 66 56.1
FAN25G1103 Fragaria x ananassa HOM05D002174 ORTHO05D005941 2.1e-12 75.1 66 60.6
Sc07g0007940 Simmondsia chinensis HOM05D002174 ORTHO05D005941 2.1e-12 75.1 66 59.1
AUR62010472 Chenopodium quinoa HOM05D002174 ORTHO05D005941 2.7e-12 74.7 60 61.7
MD11G1108300 Malus domestica HOM05D002174 ORTHO05D005941 2.7e-12 74.7 66 60.6
Peaxi162Scf00032g02518 Petunia axillaris HOM05D002174 ORTHO05D005941 2.7e-12 74.7 66 54.5
Prupe.6G077600 Prunus persica HOM05D002174 ORTHO05D005941 2.7e-12 74.7 66 60.6
Manes.07G090900 Manihot esculenta HOM05D002174 ORTHO05D005941 4.6e-12 73.9 66 59.1
Manes.07G091400 Manihot esculenta HOM05D002174 ORTHO05D005941 4.6e-12 73.9 66 59.1
CAN.G111.45 Capsicum annuum HOM05D002174 ORTHO05D005941 6.0e-12 73.6 66 56.1
Cc01_g12870 Coffea canephora HOM05D002174 ORTHO05D005941 6.0e-12 73.6 66 59.1
FvH4_3g36080 Fragaria vesca HOM05D002174 ORTHO05D005941 6.0e-12 73.6 66 59.1
MD11G1108500 Malus domestica HOM05D002174 ORTHO05D005941 7.8e-12 73.2 66 57.6
MD11G1108700 Malus domestica HOM05D002174 ORTHO05D005941 7.8e-12 73.2 66 57.6
CiPaw.13G094300 Carya illinoinensis HOM05D002174 ORTHO05D005941 1.3e-11 72.4 66 57.6
Hma1.2p1_0035F.1_g022420 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 1.3e-11 72.4 66 54.5
FAN16G0236 Fragaria x ananassa HOM05D002174 ORTHO05D005941 1.7e-11 72.0 53 67.9
FAN21G2955 Fragaria x ananassa HOM05D002174 ORTHO05D005941 1.7e-11 72.0 53 67.9
ECA236G0657 Erigeron canadensis HOM05D002174 ORTHO05D005941 2.3e-11 71.6 64 53.1
QL01p032005 Quercus lobata HOM05D002174 ORTHO05D005941 2.3e-11 71.6 66 56.1
Cpa.g.sc81.151 Carica papaya HOM05D002174 ORTHO05D005941 3.0e-11 71.2 66 56.1
Psat3g023720 Pisum sativum HOM05D002174 ORTHO05D005941 3.9e-11 70.9 66 54.5
Hma1.2p1_1542F.1_g289710 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 5.1e-11 70.5 66 51.5
Medtr2g096900 Medicago truncatula HOM05D002174 ORTHO05D005941 5.1e-11 70.5 53 62.3
Psat3g023760 Pisum sativum HOM05D002174 ORTHO05D005941 5.1e-11 70.5 66 53.0
arahy.Tifrunner.gnm1.ann1.X88BGH Arachis hypogaea HOM05D002174 ORTHO05D005941 6.6e-11 70.1 78 52.6
TPR.G34319 Trifolium pratense HOM05D002174 ORTHO05D005941 6.6e-11 70.1 53 60.4
Lj3g0015229 Lotus japonicus HOM05D002174 ORTHO05D005941 8.6e-11 69.7 53 64.2
TPR.G34323 Trifolium pratense HOM05D002174 ORTHO05D005941 8.6e-11 69.7 53 62.3
Eucgr.J02053 Eucalyptus grandis HOM05D002174 ORTHO05D005941 1.1e-10 69.3 66 57.6
MD03G1093500 Malus domestica HOM05D002174 ORTHO05D005941 1.1e-10 69.3 66 56.1
PGSC0003DMG400009672 Solanum tuberosum HOM05D002174 ORTHO05D005941 1.1e-10 69.3 66 54.5
Atru.chr3.3905 Acer truncatum HOM05D002174 ORTHO05D005941 1.5e-10 68.9 66 56.1
CsaV3_1G034170 Cucumis sativus L. HOM05D002174 ORTHO05D005941 1.5e-10 68.9 53 62.3
Psat5g284600 Pisum sativum HOM05D002174 ORTHO05D005941 1.5e-10 68.9 66 51.5
arahy.Tifrunner.gnm1.ann1.M8VE2Y Arachis hypogaea HOM05D002174 ORTHO05D005941 1.9e-10 68.6 78 51.3
Cfa011503 Carpinus fangiana HOM05D002174 ORTHO05D005941 1.9e-10 68.6 66 57.6
ClCG03G001540 Citrullus lanatus HOM05D002174 ORTHO05D005941 1.9e-10 68.6 54 63.0
FAN11G2331 Fragaria x ananassa HOM05D002174 ORTHO05D005941 1.9e-10 68.6 53 66.0
RcHm_v2.0_Chr5g0064511 Rosa chinensis HOM05D002174 ORTHO05D005941 1.9e-10 68.6 53 62.3
Glyma.02G184800 Glycine max HOM05D002174 ORTHO05D005941 4.3e-10 67.4 63 54.0
Glyma.15G038200 Glycine max HOM05D002174 ORTHO05D005941 4.3e-10 67.4 53 60.4
CSS0007494 Camellia sinensis var. sinensis HOM05D002174 ORTHO05D005941 5.6e-10 67.0 66 53.0
THA.LOC104800661 Tarenaya hassleriana HOM05D002174 ORTHO05D005941 5.6e-10 67.0 66 54.5
TAR633G2335 Trochodendron aralioides HOM05D002174 ORTHO05D005941 5.6e-10 67.0 54 61.1
MSTRG.17832 Avicennia marina HOM05D002174 ORTHO05D005941 7.3e-10 66.6 66 53.0
Nitab4.5_0002836g0030 Nicotiana tabacum HOM05D002174 ORTHO05D005941 7.3e-10 66.6 77 46.8
Oeu053913.2 Olea europaea HOM05D002174 ORTHO05D005941 7.3e-10 66.6 53 58.5
Ca_01326_v3 Cicer arietinum L. HOM05D002174 ORTHO05D005941 9.5e-10 66.2 52 59.6
Medtr2g096920 Medicago truncatula HOM05D002174 ORTHO05D005941 9.5e-10 66.2 53 56.6
Dinv12425 Davidia involucrata HOM05D002174 ORTHO05D005941 1.2e-09 65.9 66 48.5
TWI79G0621 Tripterygium wilfordii HOM05D002174 ORTHO05D005941 1.2e-09 65.9 67 55.2
Glyma.13G336100 Glycine max HOM05D002174 ORTHO05D005941 1.6e-09 65.5 53 58.5
PGR119G2250 Punica granatum HOM05D002174 ORTHO05D005941 2.1e-09 65.1 53 62.3
Sopen06g001450 Solanum pennellii HOM05D002174 ORTHO05D005941 2.1e-09 65.1 66 50.0
Phvul.L005543 Phaseolus vulgaris HOM05D002174 ORTHO05D005941 3.6e-09 64.3 53 54.7
Sabra16G0144700 Salix brachista HOM05D002174 ORTHO05D005941 4.7e-09 63.9 60 56.7
VMungo1080G1891 Vigna mungo HOM05D002174 ORTHO05D005941 4.7e-09 63.9 53 54.7
vmacro14518 Vaccinium macrocarpon HOM05D002174 ORTHO05D005941 6.2e-09 63.5 66 51.5
CSS0035653 Camellia sinensis var. sinensis HOM05D002174 ORTHO05D005941 1.1e-08 62.8 55 58.2
Migut.D02101 Erythranthe guttata HOM05D002174 ORTHO05D005941 1.1e-08 62.8 53 54.7
Nitab4.5_0000272g0180 Nicotiana tabacum HOM05D002174 ORTHO05D005941 1.1e-08 62.8 80 43.8
CANSAT54G0240 Cannabis sativa HOM05D002174 ORTHO05D005941 1.4e-08 62.4 66 48.5
Ciclev10029517m.g Citrus clementina HOM05D002174 ORTHO05D005941 1.4e-08 62.4 66 51.5
PSO339G1022 Papaver somniferum HOM05D002174 ORTHO05D005941 1.4e-08 62.4 66 48.5
PSO384G4692 Papaver somniferum HOM05D002174 ORTHO05D005941 1.4e-08 62.4 66 48.5
Lalb_Chr14g0375101 Lupinus albus HOM05D002174 ORTHO05D005941 1.8e-08 62.0 52 55.8
Potri.001G239900 Populus trichocarpa HOM05D002174 ORTHO05D005941 3.1e-08 61.2 53 56.6
Sabra16G0144600 Salix brachista HOM05D002174 ORTHO05D005941 3.1e-08 61.2 54 59.3
CDE09G0525 Ceratophyllum demersum HOM05D002174 ORTHO05D005941 6.8e-08 60.1 53 56.6
Dinv17002 Davidia involucrata HOM05D002174 ORTHO05D005941 6.8e-08 60.1 53 52.8
Hma1.2p1_0418F.1_g149160 Hydrangea macrophylla HOM05D002174 ORTHO05D005941 6.8e-08 60.1 53 54.7
Aqoxy4G02927 Aquilegia oxysepala HOM05D002174 ORTHO05D005941 1.2e-07 59.3 53 49.1
Nn5g26913 Nelumbo nucifera HOM05D002174 ORTHO05D005941 2.0e-07 58.5 66 45.5
DCAR_005338 Daucus carota HOM05D002174 ORTHO05D005941 2.6e-07 58.2 53 54.7
AagrBONN_evm.TU.Sc2ySwM_228.3892 Anthoceros agrestis HOM05D002174 ORTHO05D005941 3.4e-07 57.8 66 43.9
SMO358G0166 Selaginella moellendorffii HOM05D002174 ORTHO05D005941 3.4e-07 57.8 64 42.2
ATR0559G109 Amborella trichopoda HOM05D002174 ORTHO05D005941 4.4e-07 57.4 66 43.9
Duzib150G1375 Durio zibethinus HOM05D002174 ORTHO05D005941 5.8e-07 57.0 66 48.5
Nn2g10364 Nelumbo nucifera HOM05D002174 ORTHO05D005941 7.6e-07 56.6 37 67.6
Thecc.09G322000 Theobroma cacao HOM05D002174 ORTHO05D005941 7.6e-07 56.6 52 55.8
Zm00001eb355790 Zea mays HOM05D002174 ORTHO05D005941 7.6e-07 56.6 66 43.9
SalBow3G3211 Salvia bowleyana HOM05D002174 ORTHO05D005941 1.3e-06 55.8 61 42.6
Zm00001eb266860 Zea mays HOM05D002174 ORTHO05D005941 1.7e-06 55.5 66 42.4
Actinidia23940 Actinidia chinensis HOM05D002174 ORTHO05D005941 2.2e-06 55.1 53 49.1
GSVIVG01024962001 Vitis vinifera HOM05D002174 ORTHO05D005941 2.2e-06 55.1 45 60.0
Dinv42951 Davidia involucrata HOM05D002174 ORTHO05D005941 2.9e-06 54.7 41 58.5
Dinv43149 Davidia involucrata HOM05D002174 ORTHO05D005941 2.9e-06 54.7 41 58.5
CDE04G1891 Ceratophyllum demersum HOM05D002174 ORTHO05D005941 3.7e-06 54.3 41 58.5
Nn5g26914 Nelumbo nucifera HOM05D002174 ORTHO05D005941 3.7e-06 54.3 52 53.8
Os05g0111200 Oryza sativa ssp. japonica HOM05D002174 ORTHO05D005941 4.9e-06 53.9 64 43.8
Pp3c10_18330 Physcomitrium patens HOM05D002174 ORTHO05D005447 8.4e-06 53.1 52 44.2
Pp3c17_23180 Physcomitrium patens HOM05D002174 ORTHO05D005941 8.4e-06 53.1 65 40.0


User provided reference genes

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