Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g115120 Amaranthus hybridus HOM05D004491 ORTHO05D006742 1.9e-237 825.5 421 100.0
AUR62043003 Chenopodium quinoa HOM05D004491 ORTHO05D006742 1.3e-209 733.0 421 87.9
EL10Ac5g11643 Beta vulgaris HOM05D004491 ORTHO05D006742 1.7e-198 696.0 473 76.5
Hund18024 Selenicereus undatus HOM05D004491 ORTHO05D006742 1.6e-196 689.5 421 81.7
Actinidia24287 Actinidia chinensis HOM05D004491 ORTHO05D006742 2.3e-179 632.5 417 75.3
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla HOM05D004491 ORTHO05D006742 3.1e-179 632.1 417 75.3
CSS0018382 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 7.5e-178 627.5 417 75.8
FAN20G1381 Fragaria x ananassa HOM05D004491 ORTHO05D006742 1.7e-177 626.3 417 73.4
FAN15G2832 Fragaria x ananassa HOM05D004491 ORTHO05D006742 6.4e-177 624.4 417 73.1
FAN27G1423 Fragaria x ananassa HOM05D004491 ORTHO05D006742 6.4e-177 624.4 417 72.9
FvH4_2g24580 Fragaria vesca HOM05D004491 ORTHO05D006742 8.3e-177 624.0 417 73.1
Peaxi162Scf01039g00225 Petunia axillaris HOM05D004491 ORTHO05D006742 8.3e-177 624.0 417 74.3
TAR636G1438 Trochodendron aralioides HOM05D004491 ORTHO05D006742 1.4e-176 623.2 417 74.3
FAN24G0196 Fragaria x ananassa HOM05D004491 ORTHO05D006742 5.4e-176 621.3 417 72.9
RcHm_v2.0_Chr6g0292401 Rosa chinensis HOM05D004491 ORTHO05D006742 7.0e-176 620.9 417 72.4
Aqoxy5G00601 Aquilegia oxysepala HOM05D004491 ORTHO05D006742 9.2e-176 620.5 418 73.7
vmacro09158 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 2.0e-175 619.4 419 74.7
Nitab4.5_0003831g0010 Nicotiana tabacum HOM05D004491 ORTHO05D006742 3.5e-175 618.6 417 73.1
Cc01_g20110 Coffea canephora HOM05D004491 ORTHO05D006742 6.0e-175 617.8 417 74.8
CANSAT25G3440 Cannabis sativa HOM05D004491 ORTHO05D006742 1.0e-174 617.1 421 72.2
Prupe.8G251000 Prunus persica HOM05D004491 ORTHO05D006742 1.3e-174 616.7 418 73.9
Potri.002G213600 Populus trichocarpa HOM05D004491 ORTHO05D006742 2.3e-174 615.9 418 73.2
CiPaw.07G098600 Carya illinoinensis HOM05D004491 ORTHO05D006742 3.0e-174 615.5 417 71.7
Nitab4.5_0002093g0130 Nicotiana tabacum HOM05D004491 ORTHO05D006742 3.0e-174 615.5 417 72.7
PGSC0003DMG400024040 Solanum tuberosum HOM05D004491 ORTHO05D006742 3.9e-174 615.1 417 73.6
PGR044G0382 Punica granatum HOM05D004491 ORTHO05D006742 6.6e-174 614.4 418 73.2
Rhsim13G0018200 Rhododendron simsii HOM05D004491 ORTHO05D006742 6.6e-174 614.4 419 74.7
DCAR_012436 Daucus carota HOM05D004491 ORTHO05D006742 1.1e-173 613.6 417 73.9
QL12p023667 Quercus lobata HOM05D004491 ORTHO05D006742 1.5e-173 613.2 418 72.7
Cpa.g.sc9.150 Carica papaya HOM05D004491 ORTHO05D006742 1.9e-173 612.8 417 72.9
Sabra14G0101900 Salix brachista HOM05D004491 ORTHO05D006742 2.5e-173 612.5 417 73.6
Potri.014G135590 Populus trichocarpa HOM05D004491 ORTHO05D006742 5.6e-173 611.3 417 73.6
Haze_04798 Corylus avellana HOM05D004491 ORTHO05D006742 9.5e-173 610.5 417 71.9
MSTRG.27268 Avicennia marina HOM05D004491 ORTHO05D006742 1.6e-172 609.8 417 73.9
Cfa006054 Carpinus fangiana HOM05D004491 ORTHO05D006742 2.8e-172 609.0 417 71.7
MD03G1274300 Malus domestica HOM05D004491 ORTHO05D006742 2.8e-172 609.0 418 72.0
Migut.F00598 Erythranthe guttata HOM05D004491 ORTHO05D006742 3.6e-172 608.6 417 72.2
Sopen06g035830 Solanum pennellii HOM05D004491 ORTHO05D006742 3.6e-172 608.6 417 72.9
SalBow3G0026 Salvia bowleyana HOM05D004491 ORTHO05D006742 4.7e-172 608.2 417 72.4
Solyc06g084440.3 Solanum lycopersicum HOM05D004491 ORTHO05D006742 4.7e-172 608.2 417 72.9
MELO3C005918.2 Cucumis melo HOM05D004491 ORTHO05D006742 8.1e-172 607.4 417 70.3
Lsat_1_v5_gn_5_189841 Lactuca sativa HOM05D004491 ORTHO05D006742 1.1e-171 607.1 417 70.7
VMungo1383G0326 Vigna mungo HOM05D004491 ORTHO05D006742 1.1e-171 607.1 418 72.2
ClCG01G000050 Citrullus lanatus HOM05D004491 ORTHO05D006742 4.0e-171 605.1 417 70.0
Sabra02G0149400 Salix brachista HOM05D004491 ORTHO05D006742 4.0e-171 605.1 418 73.0
SGA_v2.0_scaffold44G16642 Striga asiatica HOM05D004491 ORTHO05D006742 5.2e-171 604.7 418 72.0
SGA_v2.0_scaffold60G20898 Striga asiatica HOM05D004491 ORTHO05D006742 6.8e-171 604.4 450 69.3
CsaV3_5G000130 Cucumis sativus L. HOM05D004491 ORTHO05D006742 1.2e-170 603.6 417 70.0
Lj1g0004162 Lotus japonicus HOM05D004491 ORTHO05D006742 1.2e-170 603.6 419 72.6
Phvul.001G201100 Phaseolus vulgaris HOM05D004491 ORTHO05D006742 2.0e-170 602.8 418 72.0
MD11G1296800 Malus domestica HOM05D004491 ORTHO05D006742 4.4e-170 601.7 418 71.3
Nn3g21241 Nelumbo nucifera HOM05D004491 ORTHO05D006742 7.5e-170 600.9 419 71.1
Manes.05G069700 Manihot esculenta HOM05D004491 ORTHO05D006742 9.9e-170 600.5 417 71.2
PSO170G1317 Papaver somniferum HOM05D004491 ORTHO05D006742 1.3e-169 600.1 419 71.8
Medtr7g107480 Medicago truncatula HOM05D004491 ORTHO05D006742 3.7e-169 598.6 419 71.8
TWI23G1267 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 3.7e-169 598.6 417 70.7
Lalb_Chr20g0111001 Lupinus albus HOM05D004491 ORTHO05D006742 6.4e-169 597.8 420 71.7
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea HOM05D004491 ORTHO05D006742 1.4e-168 596.7 418 71.3
Eucgr.K03426 Eucalyptus grandis HOM05D004491 ORTHO05D006742 1.4e-168 596.7 417 69.5
Glyma.03G207900 Glycine max HOM05D004491 ORTHO05D006742 1.4e-168 596.7 419 71.4
unitig_37.g12470 Utricularia gibba HOM05D004491 ORTHO05D006742 1.4e-168 596.7 418 72.7
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea HOM05D004491 ORTHO05D006742 2.4e-168 595.9 418 71.1
HanXRQChr11g0334841 Helianthus annuus HOM05D004491 ORTHO05D006742 3.2e-168 595.5 418 71.5
Lalb_Chr25g0287571 Lupinus albus HOM05D004491 ORTHO05D006742 3.2e-168 595.5 419 70.6
PSO407G0423 Papaver somniferum HOM05D004491 ORTHO05D006742 4.1e-168 595.1 419 71.8
Ciclev10011862m.g Citrus clementina HOM05D004491 ORTHO05D006742 3.5e-167 592.0 417 70.0
AL5G45780 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 4.6e-167 591.7 418 69.9
Duzib211G0578 Durio zibethinus HOM05D004491 ORTHO05D006742 4.6e-167 591.7 417 69.5
Psat3g025480 Pisum sativum HOM05D004491 ORTHO05D006742 4.6e-167 591.7 419 71.8
Sed0015582 Sechium edule HOM05D004491 ORTHO05D006742 6.0e-167 591.3 417 69.5
vmacro09175 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 6.0e-167 591.3 484 64.7
CSS0045203 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 1.0e-166 590.5 417 71.0
ATR0706G070 Amborella trichopoda HOM05D004491 ORTHO05D006742 1.3e-166 590.1 417 70.5
Sp5g00520 Schrenkiella parvula HOM05D004491 ORTHO05D006742 1.3e-166 590.1 418 68.7
Ca_09104_v3 Cicer arietinum L. HOM05D004491 ORTHO05D006742 1.7e-166 589.7 419 71.4
Glyma.19G205200 Glycine max HOM05D004491 ORTHO05D006742 2.3e-166 589.3 419 70.9
AT3G63000 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 3.9e-166 588.6 418 69.1
Carub.0005s2965 Capsella rubella HOM05D004491 ORTHO05D006742 3.9e-166 588.6 418 68.7
Thecc.01G288700 Theobroma cacao HOM05D004491 ORTHO05D006742 3.9e-166 588.6 417 69.3
MSTRG.8371 Avicennia marina HOM05D004491 ORTHO05D006742 5.1e-166 588.2 417 71.5
AT2G47970 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 1.1e-165 587.0 418 69.1
TWI14G1187 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 1.1e-165 587.0 417 69.5
AL4G47560 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 1.9e-165 586.3 417 69.3
Thhalv10001466m.g Eutrema salsugineum HOM05D004491 ORTHO05D006742 2.5e-165 585.9 418 69.1
Gorai.004G139800 Gossypium raimondii HOM05D004491 ORTHO05D006742 2.5e-165 585.9 417 70.3
ECA248G1403 Erigeron canadensis HOM05D004491 ORTHO05D006742 3.3e-165 585.5 416 70.4
A04p00390 Brassica napus HOM05D004491 ORTHO05D006742 4.3e-165 585.1 418 68.4
Gohir.A12G007800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 5.6e-165 584.7 417 69.1
Atru.chr5.1296 Acer truncatum HOM05D004491 ORTHO05D006742 7.3e-165 584.3 417 69.5
BcaC02g10333 Brassica carinata HOM05D004491 ORTHO05D006742 7.3e-165 584.3 418 68.2
C04p30230 Brassica napus HOM05D004491 ORTHO05D006742 9.5e-165 583.9 418 68.2
BolC4t24555H Brassica oleracea HOM05D004491 ORTHO05D006742 9.5e-165 583.9 418 68.2
Gohir.D08G136600 Gossypium hirsutum HOM05D004491 ORTHO05D006742 9.5e-165 583.9 417 69.8
Sed0005784 Sechium edule HOM05D004491 ORTHO05D006742 9.5e-165 583.9 417 67.6
BraA04t15757Z Brassica rapa HOM05D004491 ORTHO05D006742 1.2e-164 583.6 418 68.2
Oeu022805.1 Olea europaea HOM05D004491 ORTHO05D006742 2.8e-164 582.4 462 65.6
Gohir.A08G115800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 3.6e-164 582.0 417 69.3
Gorai.008G007400 Gossypium raimondii HOM05D004491 ORTHO05D006742 3.6e-164 582.0 417 68.8
Aa31LG10G16820 Aethionema arabicum HOM05D004491 ORTHO05D006742 4.7e-164 581.6 419 69.2
BcaB02g08082 Brassica carinata HOM05D004491 ORTHO05D006742 4.7e-164 581.6 418 68.4
Gohir.D12G007200 Gossypium hirsutum HOM05D004491 ORTHO05D006742 1.1e-163 580.5 417 68.8
Aa31LG1G29390 Aethionema arabicum HOM05D004491 ORTHO05D006742 1.8e-163 579.7 418 68.4
CARHR173290 Cardamine hirsuta HOM05D004491 ORTHO05D006742 2.4e-163 579.3 418 67.9
THA.LOC104817536 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 5.2e-163 578.2 419 68.7
AUR62034024 Chenopodium quinoa HOM05D004491 ORTHO05D006742 4.4e-162 575.1 335 87.2
CDE01G0135 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 1.4e-160 570.1 417 68.3
Sp4g29890 Schrenkiella parvula HOM05D004491 ORTHO05D006742 9.2e-160 567.4 418 67.5
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 2.7e-159 565.8 382 74.9
SEGI_03905 Sequoiadendron giganteum HOM05D004491 ORTHO05D006742 2.7e-159 565.8 417 66.4
MBI19_g09851_MAGBIO Magnolia biondii HOM05D004491 ORTHO05D006742 3.5e-159 565.5 425 68.0
TAR365G0641 Trochodendron aralioides HOM05D004491 ORTHO05D006742 1.0e-158 563.9 417 68.1
CDE12G0180 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 8.6e-158 560.8 417 67.1
Lj1C40T6 Lonicera japonica HOM05D004491 ORTHO05D006742 8.1e-156 554.3 513 59.3
TPR.G32310 Trifolium pratense HOM05D004491 ORTHO05D006742 1.4e-155 553.5 409 69.2
HPP92_001332 Vanilla planifolia HOM05D004491 ORTHO05D006742 4.4e-154 548.5 417 65.7
Sc05g0004670 Simmondsia chinensis HOM05D004491 ORTHO05D006742 6.0e-151 538.1 335 78.5
SHI15482 Sapria himalayana HOM05D004491 ORTHO05D006742 5.6e-149 531.6 437 63.2
Mapoly0023s0134 Marchantia polymorpha HOM05D004491 ORTHO05D006742 1.1e-147 527.3 417 62.1
COL.COLO4_08043 Corchorus olitorius HOM05D004491 ORTHO05D006742 6.7e-142 508.1 354 71.2
Pp3c4_25410 Physcomitrium patens HOM05D004491 ORTHO05D006742 6.4e-137 491.5 417 57.8
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis HOM05D004491 ORTHO05D006742 9.3e-136 487.6 417 57.6
CAN.G1209.44 Capsicum annuum HOM05D004491 ORTHO05D006742 1.2e-135 487.3 307 78.2
Os01g0377700 Oryza sativa ssp. japonica HOM05D004491 ORTHO05D006742 1.2e-130 470.7 422 58.3
Duzib133G1404 Durio zibethinus HOM05D004491 ORTHO05D006742 3.8e-129 465.7 335 68.1
CSS0029376 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 1.6e-127 460.3 354 66.1
SMO011G0024 Selaginella moellendorffii HOM05D004491 ORTHO05D006742 2.1e-127 459.9 417 55.4
Zm00001eb366640 Zea mays HOM05D004491 ORTHO05D006742 3.0e-126 456.1 423 56.7
Zm00001eb146560 Zea mays HOM05D004491 ORTHO05D006742 2.2e-124 449.9 423 56.0
THA.LOC104820469 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.1e-101 374.4 236 78.8
PSO384G1012 Papaver somniferum HOM05D004491 ORTHO05D006742 1.5e-96 357.5 244 71.3
PRCOL_00001630 Prasinoderma coloniale HOM05D004491 ORTHO05D006742 1.6e-82 310.8 435 40.7
MCO03G089 Micromonas commoda HOM05D004491 ORTHO05D006742 4.1e-75 286.2 392 41.3
THA.LOC104799698 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 7.3e-72 275.4 181 75.7
Cre06.g293051 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D001132 1.3e-65 254.6 329 45.3
Duzib147G1201 Durio zibethinus HOM05D004491 ORTHO05D006742 2.3e-62 243.8 240 54.2
Aa31sc35G70 Aethionema arabicum HOM05D004491 ORTHO05D006742 3.9e-49 199.9 191 59.2
GSVIVG01011019001 Vitis vinifera HOM05D004491 ORTHO05D006742 1.3e-41 174.9 113 74.3
Actinidia00704 Actinidia chinensis HOM05D004491 ORTHO05D019493 4.3e-40 169.9 257 43.6
AUR62034023 Chenopodium quinoa HOM05D004491 ORTHO05D019493 1.5e-37 161.4 89 88.8
BcaB02g07304 Brassica carinata HOM05D004491 ORTHO05D091651 3.5e-34 150.2 223 40.8
Zm00001eb098320 Zea mays HOM05D004491 ORTHO05D006742 3.0e-33 147.1 156 51.3
Sopen08g018880 Solanum pennellii HOM05D004491 ORTHO05D006742 5.1e-25 119.8 83 67.5
SEGI_06416 Sequoiadendron giganteum HOM05D004491 ORTHO05D019493 1.5e-24 118.2 84 63.1
Gohir.A11G248600 Gossypium hirsutum HOM05D004491 ORTHO05D019493 2.4e-22 110.9 88 62.5
C08p37710 Brassica napus HOM05D004491 ORTHO05D031847 6.9e-22 109.4 99 60.6
BolC8t51354H Brassica oleracea HOM05D004491 ORTHO05D031847 6.9e-22 109.4 99 60.6
Gohir.A04G054626 Gossypium hirsutum HOM05D004491 ORTHO05D019493 3.4e-21 107.1 84 64.3
HPP92_013688 Vanilla planifolia HOM05D004491 ORTHO05D006742 4.9e-20 103.2 84 58.3
BcaC07g40782 Brassica carinata HOM05D004491 ORTHO05D031847 8.4e-20 102.4 86 64.0
BcaC08g45254 Brassica carinata HOM05D004491 ORTHO05D032214 8.4e-20 102.4 77 61.0
BolC6t38019H Brassica oleracea HOM05D004491 ORTHO05D032214 8.4e-20 102.4 77 61.0
C06p28510 Brassica napus HOM05D004491 ORTHO05D032214 9.3e-19 99.0 77 59.7
Actinidia28542 Actinidia chinensis HOM05D004491 ORTHO05D057841 2.1e-18 97.8 186 39.8
SHI00898 Sapria himalayana HOM05D004491 ORTHO05D019493 3.3e-16 90.5 73 58.9
BcaC07g42722 Brassica carinata HOM05D004491 ORTHO05D095981 4.8e-15 86.7 69 56.5
SHI19086 Sapria himalayana HOM05D004491 ORTHO05D019493 1.1e-11 75.5 59 61.0
BcaC07g42719 Brassica carinata HOM05D004491 ORTHO05D094938 2.5e-11 74.3 69 52.2
BolC6t38020H Brassica oleracea HOM05D004491 ORTHO05D040597 2.5e-11 74.3 113 42.5
C06p28520 Brassica napus HOM05D004491 ORTHO05D040597 3.2e-11 73.9 113 41.6
CAN.G1682.2 Capsicum annuum HOM05D011687 ORTHO05D014163 1.6e-10 71.6 84 46.4


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