Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 1.3e-70 269.6 141 100.0
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 4.3e-53 211.5 138 80.4
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 2.8e-52 208.8 140 80.0
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 9.0e-43 177.2 135 68.9
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 4.5e-42 174.9 129 68.2
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 7.6e-42 174.1 132 68.9
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 2.2e-41 172.6 135 67.4
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 6.5e-41 171.0 131 66.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.9e-40 169.5 124 71.8
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 4.2e-40 168.3 139 64.7
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 4.2e-40 168.3 126 72.2
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 9.3e-40 167.2 94 90.4
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 2.1e-39 166.0 117 70.1
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 2.7e-39 165.6 134 62.7
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 3.5e-39 165.2 123 68.3
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 3.5e-39 165.2 129 65.1
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 3.5e-39 165.2 129 63.6
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 3.5e-39 165.2 120 71.7
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 4.6e-39 164.9 94 89.4
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 6.0e-39 164.5 136 64.0
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 1.0e-38 163.7 131 62.6
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.0e-38 163.7 124 69.4
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.3e-38 163.3 134 61.9
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.3e-38 163.3 94 88.3
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 1.8e-38 162.9 135 62.2
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 1.8e-38 162.9 136 63.2
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 2.3e-38 162.5 137 58.4
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 2.3e-38 162.5 127 65.4
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 2.3e-38 162.5 127 65.4
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.3e-38 162.5 129 64.3
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.3e-38 162.5 129 64.3
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 5.1e-38 161.4 131 62.6
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 8.7e-38 160.6 127 64.6
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 8.7e-38 160.6 127 64.6
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 8.7e-38 160.6 127 64.6
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 8.7e-38 160.6 131 62.6
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.9e-37 159.5 132 61.4
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 3.3e-37 158.7 124 64.5
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 4.3e-37 158.3 127 65.4
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 7.4e-37 157.5 131 61.1
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 7.4e-37 157.5 119 67.2
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.6e-36 156.4 135 63.0
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 2.1e-36 156.0 137 62.8
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 2.8e-36 155.6 122 65.6
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 2.8e-36 155.6 122 65.6
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 3.7e-36 155.2 119 63.9
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 3.7e-36 155.2 136 59.6
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 3.7e-36 155.2 131 60.3
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 6.3e-36 154.5 116 66.4
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 6.3e-36 154.5 122 64.8
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 8.2e-36 154.1 114 66.7
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 1.1e-35 153.7 122 67.2
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.1e-35 153.7 124 62.1
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 1.4e-35 153.3 122 67.2
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 2.4e-35 152.5 121 66.1
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 2.4e-35 152.5 119 65.5
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 4.1e-35 151.8 132 60.6
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 4.1e-35 151.8 137 59.1
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 1.5e-34 149.8 133 59.4
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.5e-34 149.8 129 63.6
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 3.4e-34 148.7 126 63.5
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 3.4e-34 148.7 138 60.1
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 4.5e-34 148.3 136 60.3
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 7.6e-34 147.5 133 59.4
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 1.0e-33 147.1 123 61.8
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.0e-33 147.1 129 62.8
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.3e-33 146.7 119 63.9
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.3e-33 146.7 136 56.6
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.7e-33 146.4 107 68.2
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 1.7e-33 146.4 122 61.5
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 2.9e-33 145.6 148 56.1
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 2.9e-33 145.6 123 61.8
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 3.8e-33 145.2 120 61.7
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 3.8e-33 145.2 127 55.9
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 6.5e-33 144.4 126 60.3
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.4e-32 143.3 136 55.9
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 1.4e-32 143.3 156 51.3
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.2e-32 142.1 108 67.6
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 3.2e-32 142.1 125 55.2
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 3.2e-32 142.1 119 62.2
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 2.1e-31 139.4 130 52.3
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 2.1e-31 139.4 119 62.2
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 2.1e-31 139.4 125 58.4
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 2.7e-31 139.0 126 59.5
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 3.6e-31 138.7 164 51.2
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 4.6e-31 138.3 155 50.3
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 7.9e-31 137.5 121 58.7
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 1.3e-30 136.7 109 66.1
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.8e-30 136.3 131 60.3
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 2.3e-30 136.0 126 57.9
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 3.0e-30 135.6 125 56.8
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 5.1e-30 134.8 125 56.0
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 1.6e-28 129.8 127 55.1
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 2.4e-27 125.9 120 55.8
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 6.9e-27 124.4 90 64.4
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.4e-24 116.7 83 69.9
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.4e-24 116.7 83 69.9
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.9e-24 116.3 132 55.3
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 3.2e-24 115.5 111 54.1
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 3.2e-24 115.5 85 65.9
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 3.3e-21 105.5 91 60.4
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 4.4e-21 105.1 139 44.6
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 7.4e-21 104.4 76 63.2
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 9.7e-21 104.0 108 50.9
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 1.2e-18 97.1 111 45.0
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 2.0e-18 96.3 83 59.0
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 2.6e-18 95.9 93 53.8
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.9e-17 92.4 66 71.2
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 3.2e-16 89.0 70 64.3
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 1.2e-15 87.0 100 48.0
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.6e-15 86.7 66 63.6
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 5.0e-09 65.1 100 36.0
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 1.1e-08 63.9 96 43.8
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 2.5e-08 62.8 60 53.3
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 5.2e-06 55.1 39 69.2


User provided reference genes

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