Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.3e-274 949.1 475 100.0
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.4e-217 759.6 477 78.0
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 8.4e-210 733.8 480 76.9
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.5e-190 669.8 479 69.9
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-187 659.8 475 71.2
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 8.0e-160 567.8 421 67.5
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.2e-155 553.9 487 56.5
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 2.9e-154 549.3 486 57.8
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 7.2e-153 544.7 484 58.5
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.6e-152 543.5 481 57.8
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.8e-152 542.7 493 54.6
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 6.1e-152 541.6 463 57.2
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 4.0e-151 538.9 448 58.5
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 8.8e-151 537.7 488 55.9
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 8.8e-151 537.7 494 56.3
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.2e-150 537.3 465 57.4
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 2.0e-150 536.6 447 57.9
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 2.0e-150 536.6 489 54.8
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 7.5e-150 534.6 440 58.4
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.2e-149 533.1 477 57.9
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 2.2e-149 533.1 429 58.3
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 4.9e-149 531.9 490 53.7
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.1e-148 530.8 446 57.8
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 2.4e-148 529.6 442 58.1
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 5.4e-148 528.5 473 56.0
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 9.2e-148 527.7 479 55.5
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 9.2e-148 527.7 475 55.8
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 9.2e-148 527.7 455 56.9
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.6e-147 526.9 423 58.9
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.0e-147 526.6 420 60.2
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 2.7e-147 526.2 474 56.5
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 3.5e-147 525.8 419 60.4
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 4.5e-147 525.4 495 54.3
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 5.9e-147 525.0 414 60.6
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 7.8e-147 524.6 486 53.7
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 1.0e-146 524.2 368 68.2
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.7e-146 523.5 452 57.3
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 2.3e-146 523.1 486 53.9
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 2.9e-146 522.7 419 60.4
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.8e-146 522.3 399 63.7
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 6.6e-146 521.5 426 58.9
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 1.1e-145 520.8 450 56.9
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 1.1e-145 520.8 457 55.1
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.1e-145 520.8 464 55.8
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.5e-145 520.4 423 57.7
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 4.3e-145 518.8 442 56.8
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 5.6e-145 518.5 452 57.1
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.2e-144 517.3 423 58.2
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 1.2e-144 517.3 420 58.1
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.0e-143 514.2 472 54.0
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 1.0e-143 514.2 486 53.5
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.4e-143 513.8 417 59.7
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 2.3e-143 513.1 416 58.2
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 4.0e-143 512.3 473 54.3
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 8.9e-143 511.1 479 54.5
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 2.0e-142 510.0 417 58.5
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 2.6e-142 509.6 427 57.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 3.4e-142 509.2 456 55.0
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.9e-141 506.1 419 57.8
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 6.4e-141 505.0 456 53.3
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 6.4e-141 505.0 551 50.1
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 4.1e-140 502.3 426 56.1
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.1e-140 502.3 461 54.0
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 5.4e-140 501.9 406 58.6
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 9.2e-140 501.1 423 58.2
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.6e-139 500.4 477 53.5
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 2.0e-139 500.0 477 53.5
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 2.7e-139 499.6 437 56.5
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 4.6e-139 498.8 442 54.1
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.7e-138 496.9 412 58.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 2.3e-138 496.5 423 57.7
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 6.6e-138 495.0 500 50.0
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.9e-137 493.4 412 56.8
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 7.3e-137 491.5 389 59.9
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 9.5e-137 491.1 477 52.0
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.6e-136 490.3 477 52.4
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.4e-135 487.3 454 53.1
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 3.1e-135 486.1 414 54.6
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 3.4e-134 482.6 418 57.7
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.9e-133 479.6 439 54.4
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.4e-132 477.2 479 48.2
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.9e-129 466.8 461 52.5
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 4.3e-129 465.7 371 58.8
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 3.1e-127 459.5 399 55.9
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 6.8e-127 458.4 503 47.9
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 4.4e-126 455.7 454 50.7
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 7.5e-126 454.9 374 55.9
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 3.7e-125 452.6 444 51.4
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 3.2e-124 449.5 419 53.5
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 5.4e-124 448.7 459 50.1
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 2.7e-123 446.4 491 51.1
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 2.1e-120 436.8 392 54.1
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.4e-118 429.1 431 52.7
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 2.4e-116 423.3 363 55.1
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 5.4e-116 422.2 436 48.9
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-113 414.1 421 51.3
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 2.5e-105 386.7 383 53.8
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 6.0e-99 365.5 423 44.2
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.5e-97 360.1 430 42.1
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-94 350.9 300 56.7
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 6.4e-93 345.5 280 60.7
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.1e-92 344.7 359 51.0
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 7.9e-91 338.6 413 43.1
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 3.0e-82 310.1 398 41.2
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 9.7e-81 305.1 222 63.1
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 2.1e-67 260.8 257 51.4
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 4.7e-67 259.6 244 56.6
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.2e-59 235.0 281 46.6
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 2.0e-54 217.6 451 33.3
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.2e-49 201.8 214 48.1
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.5e-41 174.9 454 29.1
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 9.5e-36 155.6 99 73.7
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.6e-35 154.8 164 52.4
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 5.4e-31 139.8 103 62.1
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.9e-30 136.3 117 55.6
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 2.1e-27 127.9 131 48.1
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.8e-26 122.9 95 56.8
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.4e-25 120.6 413 26.4
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.6e-22 110.2 87 60.9
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.2e-19 102.1 70 65.7
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.8e-18 96.3 90 51.1
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.0e-13 82.4 69 52.2
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 3.9e-13 80.5 68 60.3
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.9e-12 78.2 51 64.7
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 5.2e-10 70.1 49 75.5
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 7.5e-09 66.2 103 46.6


User provided reference genes

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