Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia35191 Actinidia chinensis HOM05D002300 ORTHO05D002340 2.0e-152 542.3 271 100.0
Actinidia18822 Actinidia chinensis HOM05D002300 ORTHO05D002340 9.2e-52 208.0 308 48.1
CSS0020263 Camellia sinensis var. sinensis HOM05D002300 ORTHO05D002340 2.3e-26 123.6 320 36.2
CSS0035149 Camellia sinensis var. sinensis HOM05D002300 ORTHO05D002340 2.3e-26 123.6 320 36.2
vmacro09455 Vaccinium macrocarpon HOM05D002300 ORTHO05D002340 1.1e-25 121.3 312 34.9
vmacro09461 Vaccinium macrocarpon HOM05D002300 ORTHO05D002340 4.3e-25 119.4 312 34.0
Dinv26628 Davidia involucrata HOM05D002300 ORTHO05D002340 5.8e-22 109.0 331 33.2
Rhsim04G0031600 Rhododendron simsii HOM05D002300 ORTHO05D002340 7.6e-22 108.6 172 43.6
CSS0003694 Camellia sinensis var. sinensis HOM05D002300 ORTHO05D002340 8.7e-18 95.1 302 34.4
CSS0017904 Camellia sinensis var. sinensis HOM05D002300 ORTHO05D002340 8.7e-18 95.1 302 34.4
QL04p065718 Quercus lobata HOM05D002300 ORTHO05D002340 3.6e-16 89.7 321 31.8
Thecc.01G202200 Theobroma cacao HOM05D002300 ORTHO05D002340 2.1e-11 73.9 178 38.2
Cpa.g.sc136.82 Carica papaya HOM05D002300 ORTHO05D002340 4.6e-11 72.8 216 34.3
Sabra14G0131400 Salix brachista HOM05D002300 ORTHO05D002340 1.3e-10 71.2 177 38.4
CiPaw.04G198300 Carya illinoinensis HOM05D002300 ORTHO05D002340 3.9e-10 69.7 242 33.5
COL.COLO4_19705 Corchorus olitorius HOM05D002300 ORTHO05D002340 1.5e-09 67.8 172 37.2
Hma1.2p1_1373F.1_g278720 Hydrangea macrophylla HOM05D002300 ORTHO05D002340 2.5e-09 67.0 279 30.5
TWI36G0087 Tripterygium wilfordii HOM05D002300 ORTHO05D002340 3.3e-09 66.6 143 41.3
Glyma.20G049300 Glycine max HOM05D002300 ORTHO05D002340 4.3e-09 66.2 117 46.2
Lalb_Chr10g0093501 Lupinus albus HOM05D002300 ORTHO05D002340 9.6e-09 65.1 133 41.4
Cfa014189 Carpinus fangiana HOM05D002300 ORTHO05D002340 2.8e-08 63.5 274 28.5
Potri.014G171900 Populus trichocarpa HOM05D002300 ORTHO05D002340 2.8e-08 63.5 184 37.5
Ciclev10014369m.g Citrus clementina HOM05D002300 ORTHO05D002340 3.6e-08 63.2 317 28.4
DCAR_013813 Daucus carota HOM05D002300 ORTHO05D002340 4.8e-08 62.8 326 28.8
Manes.12G068200 Manihot esculenta HOM05D002300 ORTHO05D002340 8.1e-08 62.0 266 30.8
Haze_12566 Corylus avellana HOM05D002300 ORTHO05D002340 1.4e-07 61.2 248 29.4
MD09G1134400 Malus domestica HOM05D002300 ORTHO05D002340 1.4e-07 61.2 275 29.1
RcHm_v2.0_Chr2g0155211 Rosa chinensis HOM05D002300 ORTHO05D002340 1.4e-07 61.2 110 46.4
TAR629G0670 Trochodendron aralioides HOM05D002300 ORTHO05D002340 1.8e-07 60.8 176 35.8
FvH4_6g40190 Fragaria vesca HOM05D002300 ORTHO05D002340 3.1e-07 60.1 140 41.4
FAN09G2329 Fragaria x ananassa HOM05D002300 ORTHO05D002340 3.1e-07 60.1 140 41.4
Glyma.13G075300 Glycine max HOM05D002300 ORTHO05D002340 3.1e-07 60.1 146 44.5
Peaxi162Scf00000g06117 Petunia axillaris HOM05D002300 ORTHO05D002340 4.0e-07 59.7 221 32.6
Cc05_g09890 Coffea canephora HOM05D002300 ORTHO05D002340 5.3e-07 59.3 304 27.6
Gohir.A08G048600 Gossypium hirsutum HOM05D002300 ORTHO05D002340 5.3e-07 59.3 170 34.1
Gorai.004G060600 Gossypium raimondii HOM05D002300 ORTHO05D002340 5.3e-07 59.3 163 37.4
Gohir.D08G058700 Gossypium hirsutum HOM05D002300 ORTHO05D002340 6.9e-07 58.9 163 37.4
Prupe.3G192300 Prunus persica HOM05D002300 ORTHO05D002340 6.9e-07 58.9 197 33.5
Duzib133G0548 Durio zibethinus HOM05D002300 ORTHO05D002340 1.2e-06 58.2 308 26.9
TWI18G0351 Tripterygium wilfordii HOM05D002300 ORTHO05D002340 1.2e-06 58.2 160 37.5
arahy.Tifrunner.gnm1.ann1.2RB1YT Arachis hypogaea HOM05D002300 ORTHO05D002340 1.5e-06 57.8 169 36.7
FAN14G3385 Fragaria x ananassa HOM05D000872 ORTHO05D002340 4.5e-06 56.2 140 40.0
FAN05G0147 Fragaria x ananassa HOM05D002300 ORTHO05D002340 9.9e-06 55.1 140 40.0


User provided reference genes

Program Settings